Basic Information:

  VIRBase ID:  

VHID00397508

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART9-5p:  MIMAT0004816          NRP1:  NR_045259     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART9-5p	NRP1
miRBase Accession/Entrez ID	MIMAT0004816	8829
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BDCA4//CD304//NP1//NRP//VEGF165R

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NRP1	chr10:33569801(-) A-I      intronic chr10:33569828(-) A-I      intronic chr10:33609058(-) A-I      intronic chr10:33609073(-) A-I      intronic chr10:33609092(-) A-I      intronic chr10:33609111(-) A-I      intronic chr10:33609119(-) A-I      intronic chr10:33609083(-) A-I      intronic chr10:33499927(-) A-I      intronic chr10:33497724(-) A-I      intronic chr10:33497744(-) A-I      intronic chr10:33497753(-) A-I      intronic chr10:33499829(-) A-I      intronic chr10:33499860(-) A-I      intronic chr10:33499861(-) A-I      intronic chr10:33472208(-) A-I      intronic chr10:33473029(-) A-I      intronic chr10:33475989(-) A-I      intronic chr10:33476004(-) A-I      intronic chr10:33550762(-) A-I      intronic chr10:33550770(-) A-I      intronic chr10:33550802(-) A-I      intronic chr10:33550828(-) A-I      intronic chr10:33550831(-) A-I      intronic chr10:33550832(-) A-I      intronic chr10:33550833(-) A-I      intronic chr10:33550834(-) A-I      intronic chr10:33550835(-) A-I      intronic chr10:33550839(-) A-I      intronic chr10:33550840(-) A-I      intronic chr10:33550841(-) A-I      intronic chr10:33550846(-) A-I      intronic chr10:33550877(-) A-I      intronic chr10:33551507(-) A-I      intronic chr10:33569788(-) A-I      intronic chr10:33569794(-) A-I      intronic chr10:33569798(-) A-I      intronic chr10:33608097(-) A-I      intronic chr10:33608135(-) A-I      intronic chr10:33608587(-) A-I      intronic chr10:33608588(-) A-I      intronic chr10:33608590(-) A-I      intronic chr10:33608600(-) A-I      intronic chr10:33472076(-) A-I      intronic chr10:33608611(-) A-I      intronic chr10:33608621(-) A-I      intronic chr10:33608622(-) A-I      intronic chr10:33574575(-) A-I      intronic chr10:33608653(-) A-I      intronic chr10:33608659(-) A-I      intronic chr10:33608671(-) A-I      intronic chr10:33608679(-) A-I      intronic chr10:33608695(-) A-I      intronic chr10:33608698(-) A-I      intronic chr10:33608709(-) A-I      intronic chr10:33608778(-) A-I      intronic chr10:33608786(-) A-I      intronic chr10:33608787(-) A-I      intronic chr10:33608795(-) A-I      intronic chr10:33608984(-) A-I      intronic chr10:33608997(-) A-I      intronic chr10:33609038(-) A-I      intronic chr10:33609075(-) A-I      intronic chr10:33609078(-) A-I      intronic chr10:33609113(-) A-I      intronic chr10:33609129(-) A-I      intronic chr10:33609132(-) A-I      intronic chr10:33512444(-) A-I      intronic chr10:33609141(-) A-I      intronic chr10:33609184(-) A-I      intronic chr10:33610085(-) A-I      intronic chr10:33611419(-) A-I      intronic chr10:33611530(-) A-I      intronic chr10:33611578(-) A-I      intronic chr10:33612063(-) A-I      intronic chr10:33612079(-) A-I      intronic chr10:33612116(-) A-I      intronic chr10:33574678(-) A-I      intronic chr10:33512448(-) A-I      intronic chr10:33580948(-) A-I      intronic chr10:33509753(-) A-I      intronic chr10:33473068(-) A-I      intronic chr10:33550693(-) A-I      intronic chr10:33612050(-) A-I      intronic chr10:33511564(-) A-I      intronic chr10:33472152(-) A-I      intronic chr10:33507454(-) A-I      intronic chr10:33472190(-) A-I      intronic chr10:33473132(-) A-I      intronic chr10:33473138(-) A-I      intronic chr10:33473139(-) A-I      intronic chr10:33473147(-) A-I      intronic chr10:33476025(-) A-I      intronic chr10:33476074(-) A-I      intronic chr10:33477588(-) A-I      intronic chr10:33477613(-) A-I      intronic chr10:33505118(-) A-I      intronic chr10:33477560(-) A-I      intronic chr10:33505133(-) A-I      intronic chr10:33505134(-) A-I      intronic chr10:33507385(-) A-I      intronic chr10:33507443(-) A-I      intronic chr10:33507474(-) A-I      intronic chr10:33507540(-) A-I      intronic chr10:33510133(-) A-I      intronic chr10:33512346(-) A-I      intronic chr10:33512510(-) A-I      intronic chr10:33526734(-) A-I      intronic chr10:33480065(-) A-I      intronic chr10:33526735(-) A-I      intronic chr10:33546443(-) A-I      intronic chr10:33477683(-) A-I      intronic chr10:33549010(-) A-I      intronic chr10:33550761(-) A-I      intronic chr10:33550767(-) A-I      intronic chr10:33550789(-) A-I      intronic chr10:33550804(-) A-I      intronic chr10:33550843(-) A-I      intronic chr10:33550863(-) A-I      intronic chr10:33550867(-) A-I      intronic chr10:33550868(-) A-I      intronic chr10:33550896(-) A-I      intronic chr10:33476000(-) A-I      intronic chr10:33550910(-) A-I      intronic chr10:33550914(-) A-I      intronic chr10:33550915(-) A-I      intronic chr10:33550931(-) A-I      intronic chr10:33550937(-) A-I      intronic chr10:33550943(-) A-I      intronic chr10:33551374(-) A-I      intronic chr10:33551396(-) A-I      intronic chr10:33472014(-) A-I      intronic chr10:33551491(-) A-I      intronic chr10:33551411(-) A-I      intronic chr10:33546453(-) A-I      intronic chr10:33551413(-) A-I      intronic chr10:33551414(-) A-I      intronic chr10:33551439(-) A-I      intronic chr10:33555946(-) A-I      intronic chr10:33551448(-) A-I      intronic chr10:33477548(-) A-I      intronic chr10:33551451(-) A-I      intronic chr10:33551474(-) A-I      intronic chr10:33551483(-) A-I      intronic chr10:33551487(-) A-I      intronic chr10:33608682(-) A-I      intronic chr10:33551509(-) A-I      intronic chr10:33551544(-) A-I      intronic chr10:33551545(-) A-I      intronic chr10:33551549(-) A-I      intronic chr10:33551555(-) A-I      intronic chr10:33569665(-) A-I      intronic chr10:33569866(-) A-I      intronic chr10:33569867(-) A-I      intronic chr10:33569873(-) A-I      intronic chr10:33569877(-) A-I      intronic chr10:33570084(-) A-I      intronic chr10:33570145(-) A-I      intronic chr10:33570146(-) A-I      intronic chr10:33570154(-) A-I      intronic chr10:33574592(-) A-I      intronic chr10:33580924(-) A-I      intronic chr10:33580970(-) A-I      intronic chr10:33580996(-) A-I      intronic chr10:33580999(-) A-I      intronic chr10:33581040(-) A-I      intronic chr10:33607968(-) A-I      intronic chr10:33473051(-) A-I      intronic chr10:33574644(-) A-I      intronic chr10:33472154(-) A-I      intronic chr10:33476052(-) A-I      intronic chr10:33473007(-) A-I      intronic chr10:33473140(-) A-I      intronic chr10:33473211(-) A-I      intronic chr10:33510063(-) A-I      intronic chr10:33548861(-) A-I      intronic chr10:33475996(-) A-I      intronic chr10:33612053(-) A-I      intronic chr10:33559527(-) A-I      intronic chr10:33511587(-) A-I      intronic chr10:33612054(-) A-I      intronic chr10:33480006(-) A-I      intronic chr10:33479938(-) A-I      intronic chr10:33581804(-) A-I      intronic chr10:33570204(-) A-I      intronic chr10:33550857(-) A-I      intronic chr10:33472151(-) A-I      intronic chr10:33507546(-) A-I      intronic chr10:33551482(-) A-I      intronic chr10:33580985(-) A-I      intronic chr10:33574555(-) A-I      intronic chr10:33509976(-) A-I      intronic chr10:33477709(-) A-I      intronic chr10:33473061(-) A-I      intronic chr10:33479874(-) A-I      intronic chr10:33608213(-) A-I      intronic chr10:33473055(-) A-I      intronic chr10:33473225(-) A-I      intronic chr10:33612041(-) A-I      intronic chr10:33472048(-) A-I      intronic chr10:33608215(-) A-I      intronic chr10:33585722(-) A-I      intronic chr10:33550837(-) A-I      intronic chr10:33476044(-) A-I      intronic chr10:33581794(-) A-I      intronic chr10:33472079(-) A-I      intronic chr10:33611427(-) A-I      intronic chr10:33473036(-) A-I      intronic chr10:33569730(-) A-I      intronic chr10:33507545(-) A-I      intronic chr10:33473037(-) A-I      intronic chr10:33473208(-) A-I      intronic chr10:33512494(-) A-I      intronic chr10:33580910(-) A-I      intronic chr10:33476028(-) A-I      intronic chr10:33507562(-) A-I      intronic chr10:33608104(-) A-I      intronic chr10:33550694(-) A-I      intronic chr10:33581799(-) A-I      intronic chr10:33472982(-) A-I      intronic chr10:33509914(-) A-I      intronic chr10:33558346(-) A-I      intronic chr10:33475942(-) A-I      intronic chr10:33611507(-) A-I      intronic chr10:33473137(-) A-I      intronic chr10:33569744(-) A-I      intronic chr10:33478124(-) A-I      intronic chr10:33480159(-) A-I      intronic chr10:33497730(-) A-I      intronic chr10:33499897(-) A-I      intronic chr10:33499925(-) A-I      intronic chr10:33499945(-) A-I      intronic chr10:33604984(-) A-I      intronic chr10:33546441(-) A-I      intronic chr10:33497787(-) A-I      intronic chr10:33497763(-) A-I      intronic chr10:33607731(-) A-I      intronic chr10:33499859(-) A-I      intronic chr10:33497739(-) A-I      intronic chr10:33566887(-) A-I      intronic chr10:33497762(-) A-I      intronic chr10:33565814(-) A-I      intronic chr10:33499893(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NRP1	chr10:33479938(-) A-I intron -    21960545 chr10:33475924(-) A-I intron -    21960545 chr10:33475942(-) A-I intron -    21960545 chr10:33475950(-) A-I intron -    21960545 chr10:33476000(-) A-I intron -    21960545 chr10:33476074(-) A-I intron -    21960545 chr10:33478124(-) A-I intron -    21960545 chr10:33480159(-) A-I intron -    21960545 chr10:33611529(-) A-I intron -    21960545 chr10:33611578(-) A-I intron -    21960545 chr10:33499945(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NRP1	chr10:33466440-33466441(-) m6A 3'UTR       24981863//27773535 chr10:33466453-33466454(-) m6A 3'UTR       24981863//27773535 chr10:33466478-33466479(-) m6A 3'UTR       24981863//27773535 chr10:33466497-33466498(-) m6A 3'UTR       24981863//27773535 chr10:33466502-33466503(-) m6A 3'UTR       24981863//27773535 chr10:33466512-33466513(-) m6A 3'UTR       24981863//27773535 chr10:33466530-33466531(-) m6A 3'UTR       24981863//27773535 chr10:33466570-33466571(-) m6A 3'UTR       24981863//27773535 chr10:33467368-33467369(-) m6A 3'UTR       26404942 chr10:33467411-33467412(-) m6A 3'UTR       24981863//26404942//27773535 chr10:33467425-33467426(-) m6A 3'UTR       24981863//26404942//27773535 chr10:33467478-33467479(-) m6A 3'UTR       24981863//26404942//27773535 chr10:33467498-33467499(-) m6A 3'UTR       24981863//26404942//27773535 chr10:33467545-33467546(-) m6A 3'UTR       24981863//26404942//27773535 chr10:33467616-33467617(-) m6A 3'UTR       24981863 chr10:33467629-33467630(-) m6A 3'UTR       24981863 chr10:33468170-33468171(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085 chr10:33468294-33468295(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085 chr10:33468340-33468341(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085 chr10:33468370-33468371(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085 chr10:33468385-33468386(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085 chr10:33468554-33468555(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085 chr10:33468596-33468597(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22608085 chr10:33468610-33468611(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22608085 chr10:33468667-33468668(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085 chr10:33468755-33468756(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085 chr10:33468818-33468819(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085 chr10:33468842-33468843(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085 chr10:33468848-33468849(-) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//27371828//22575960//22608085 chr10:33468982-33468983(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr10:33468996-33468997(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr10:33469040-33469041(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr10:33469069-33469070(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr10:33469082-33469083(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr10:33469100-33469101(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr10:33469211-33469212(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr10:33469218-33469219(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr10:33469250-33469251(-) m6A CDS       24981863//26404942//27773535//22608085 chr10:33471628-33471629(-) m6A CDS//intron       24981863//26404942//27773535//22608085 chr10:33471651-33471652(-) m6A CDS//intron       24981863//27773535 chr10:33471666-33471667(-) m6A CDS//intron       24981863//27773535 chr10:33474620-33474621(-) m6A CDS       27773535 chr10:33475153-33475154(-) m6A CDS       27773535 chr10:33475207-33475208(-) m6A CDS       27773535 chr10:33475261-33475262(-) m6A CDS       27773535 chr10:33475328-33475329(-) m6A CDS       27773535 chr10:33483465-33483466(-) m6A 3'UTR//intron       24981863//27773535 chr10:33483497-33483498(-) m6A 3'UTR//intron       24981863//27773535 chr10:33483517-33483518(-) m6A 3'UTR//intron       24981863//27773535 chr10:33483560-33483561(-) m6A 3'UTR//intron       24981863//27773535 chr10:33483592-33483593(-) m6A 3'UTR//intron       24981863 chr10:33483637-33483638(-) m6A 3'UTR//intron       24981863 chr10:33483683-33483684(-) m6A CDS//intron       27773535 chr10:33484367-33484368(-) m6A 3'UTR//intron       27773535 chr10:33486594-33486595(-) m6A CDS//intron       27773535 chr10:33491683-33491684(-) m6A CDS//intron       27773535 chr10:33491842-33491843(-) m6A CDS//intron       27773535//27773536 chr10:33491889-33491890(-) m6A CDS//intron       27773535//27773536 chr10:33491909-33491910(-) m6A CDS//intron       27773535//27773536 chr10:33494391-33494392(-) m6A 3'UTR//intron       27773535//27773536 chr10:33494429-33494430(-) m6A 3'UTR//intron       27773535//27773536 chr10:33494447-33494448(-) m6A 3'UTR//intron       27773535//27773536 chr10:33494453-33494454(-) m6A 3'UTR//intron       27773535//27773536 chr10:33494511-33494512(-) m6A 3'UTR//intron       27773535 chr10:33494542-33494543(-) m6A 3'UTR//intron       27773535 chr10:33494561-33494562(-) m6A 3'UTR//intron       27773535 chr10:33494595-33494596(-) m6A 3'UTR//intron       27773535 chr10:33494638-33494639(-) m6A 3'UTR//intron       27773535 chr10:33496539-33496540(-) m6A CDS//intron       27773536 chr10:33496601-33496602(-) m6A CDS//intron       24209618//27773535//27773536 chr10:33500340-33500341(-) m6A 3'UTR//intron       24209618//27773535//27773536 chr10:33500349-33500350(-) m6A 3'UTR//intron       24209618//27773535//27773536 chr10:33501474-33501475(-) m6A 3'UTR//intron       27773535 chr10:33501480-33501481(-) m6A 3'UTR//intron       27773535 chr10:33501498-33501499(-) m6A 3'UTR//intron       27773535 chr10:33502299-33502300(-) m6A CDS//intron       24209618//24981863//27773535 chr10:33502353-33502354(-) m6A CDS       24209618//24981863//26404942//27773535//27371828//22608085 chr10:33502404-33502405(-) m6A CDS       24209618//24981863//26404942//27773535//27371828//22608085 chr10:33502464-33502465(-) m6A CDS       24284625//24981863//26404942//27773535//27371828//22608085 chr10:33502545-33502546(-) m6A CDS       24981863//26404942//22608085 chr10:33502560-33502561(-) m6A CDS       26404942 chr10:33502566-33502567(-) m6A CDS       26404942 chr10:33502607-33502608(-) m6A CDS       26404942 chr10:33515177-33515178(-) m6A CDS       27773535 chr10:33515212-33515213(-) m6A CDS       27773535 chr10:33538384-33538385(-) m6A CDS//intron       27773535 chr10:33538408-33538409(-) m6A CDS//intron       27773535 chr10:33559741-33559742(-) m6A CDS//intron       26404942 chr10:33619641-33619642(-) m6A 5'UTR//CDS       26404942 chr10:33619647-33619648(-) m6A 5'UTR//CDS       26404942 chr10:33619698-33619699(-) m6A 5'UTR//CDS       26404942//27773535 chr10:33623500-33623501(-) m6A 5'UTR       24981863//26404942//27773536 chr10:33623560-33623561(-) m6A 5'UTR       24981863//26404942//27773536 chr10:33623592-33623593(-) m6A 5'UTR       24981863//27773535 chr10:33623716-33623717(-) m6A 5'UTR       24981863//27773535 chr10:33623759-33623760(-) m6A 5'UTR       24981863//27773535 chr10:33623767-33623768(-) m6A 5'UTR       24981863//27773535 chr10:33623820-33623821(-) m6A 5'UTR//intron       24981863//27773535 chr10:33623987-33623988(-) m6A 5'UTR//intron       24981863//27773536 chr10:33625183-33625184(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NRP1	Exosome Blood     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART9-5p
Interactor2: NRP1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg