Basic Information:

  VIRBase ID:  

VHID00397227

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART9-5p:  MIMAT0004816          NFYA:  NM_021705     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART9-5p	NFYA
miRBase Accession/Entrez ID	MIMAT0004816	4800
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CBF-A//CBF-B//HAP2//NF-YA

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NFYA	chr6:41043050(+) A-I      intronic chr6:41043024(+) A-I      intronic chr6:41042969(+) A-I      intronic chr6:41056848(+) A-I      intronic chr6:41056849(+) A-I      intronic chr6:41056862(+) A-I      intronic chr6:41056868(+) A-I      intronic chr6:41056872(+) A-I      intronic chr6:41063331(+) A-I      intronic chr6:41063390(+) A-I      intronic chr6:41063356(+) A-I      intronic chr6:41063336(+) A-I      intronic chr6:41061310(+) A-I      intronic chr6:41061273(+) A-I      intronic chr6:41060010(+) A-I      intronic chr6:41056923(+) A-I      intronic chr6:41056852(+) A-I      intronic chr6:41056398(+) A-I      intronic chr6:41056107(+) A-I      intronic chr6:41056041(+) A-I      intronic chr6:41055974(+) A-I      intronic chr6:41055903(+) A-I      intronic chr6:41052424(+) A-I      intronic chr6:41043051(+) A-I      intronic chr6:41056991(+) A-I      intronic chr6:41056525(+) A-I      intronic chr6:41056436(+) A-I      intronic chr6:41056997(+) A-I      intronic chr6:41056417(+) A-I      intronic chr6:41056514(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NFYA	chr6:41040804-41040805(+) m6A 5'UTR       24209618//24981863 chr6:41046804-41046805(+) m6A 5'UTR       24209618//24981863 chr6:41046825-41046826(+) m6A 5'UTR       24209618//24981863 chr6:41046847-41046848(+) m6A CDS       24209618 chr6:41046887-41046888(+) m6A CDS       24209618 chr6:41051913-41051914(+) m6A CDS       24981863 chr6:41057337-41057338(+) m6A CDS       24981863 chr6:41057358-41057359(+) m6A CDS       24981863 chr6:41057392-41057393(+) m6A CDS       24981863 chr6:41060745-41060746(+) m6A CDS       24284625 chr6:41060787-41060788(+) m6A CDS       22575960 chr6:41065225-41065226(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr6:41065259-41065260(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr6:41065265-41065266(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr6:41065359-41065360(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:41065370-41065371(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:41065416-41065417(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:41065491-41065492(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41065509-41065510(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41065555-41065556(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41065662-41065663(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41065747-41065748(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr6:41065792-41065793(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr6:41065883-41065884(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr6:41065913-41065914(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr6:41065933-41065934(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41065941-41065942(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41065962-41065963(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41065967-41065968(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41066032-41066033(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41066053-41066054(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:41066075-41066076(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:41066238-41066239(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr6:41066323-41066324(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr6:41066512-41066513(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr6:41066519-41066520(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr6:41066529-41066530(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41066549-41066550(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41066611-41066612(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41066622-41066623(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41066664-41066665(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41066673-41066674(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41066691-41066692(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:41066757-41066758(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr6:41066779-41066780(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr6:41066839-41066840(+) m6A 3'UTR       24981863//22608085 chr6:41066905-41066906(+) m6A 3'UTR       22608085 chr6:41067388-41067389(+) Cm 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NFYA	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART9-5p
Interactor2: NFYA

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg