Basic Information:

  VIRBase ID:  

VHID00396112

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART7-5p:  MIMAT0004815          AP1AR:  NM_001128426     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART7-5p	AP1AR
miRBase Accession/Entrez ID	MIMAT0004815	55435
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	2C18//C4orf16//gamma-BAR//GBAR//PRO0971

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AP1AR	chr4:113157771(+) A-I      intronic chr4:113167594(+) A-I      intronic chr4:113167406(+) A-I      intronic chr4:113155144(+) A-I      intronic chr4:113167452(+) A-I      intronic chr4:113157657(+) A-I      intronic chr4:113183291(+) A-I      intronic chr4:113158449(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AP1AR	chr4:113173283(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AP1AR	chr4:113152912-113152913(+) m6A 5'UTR//exon       25456834//24981863 chr4:113153059-113153060(+) m6A 5'UTR//exon       24284625//25456834//24981863 chr4:113153147-113153148(+) m6A 5'UTR//exon       25456834//24981863//27371828//22608085 chr4:113153254-113153255(+) m6A CDS//exon       24209618//25456834//24981863//22608085 chr4:113153279-113153280(+) m6A CDS//exon       24209618//25456834//24981863//22608085 chr4:113174379-113174380(+) m6A CDS//exon       24209618//24981863//22608085 chr4:113181984-113181985(+) m6A CDS//exon       24981863 chr4:113184169-113184170(+) m6A CDS//exon//intron       24981863 chr4:113187808-113187809(+) m6A CDS       27773535 chr4:113189337-113189338(+) m6A CDS       24209618//24981863//27773535//22608085 chr4:113189347-113189348(+) m6A CDS       24209618//24981863//27773535//22608085 chr4:113189385-113189386(+) m6A CDS       24209618//24981863//27773535//22608085 chr4:113189513-113189514(+) m6A CDS       24209618//24981863//27773535//22608085 chr4:113189556-113189557(+) m6A CDS       24209618//24981863//27773535//22608085 chr4:113189612-113189613(+) m6A 3'UTR       24981863//27773535//22608085 chr4:113189671-113189672(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AP1AR	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART7-5p
Interactor2: AP1AR

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg