Detail Information

Basic Information:


  VIRBase ID:  

VHID00394749

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART2-3p:           SP8:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART2-3p SP8
miRBase
Accession/Entrez ID
MIMAT0004744 221833
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - BTD

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SP8
chr7:20824156-20824157(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085
chr7:20824273-20824274(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085
chr7:20824503-20824504(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085
chr7:20824657-20824658(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085
chr7:20824710-20824711(-) m6A CDS       24209618//25456834//24981863//27773536//22608085
chr7:20824716-20824717(-) m6A CDS       24209618//25456834//24981863//27773536//22608085
chr7:20825319-20825320(-) m6A CDS       25456834//24981863//27773535
chr7:20825408-20825409(-) m6A 5'UTR//CDS       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SP8
Exosome Serum     -
Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART2-3p
Interactor2: SP8

Evidence Support:


Prediction-Evidence miRanda//PITA
Support Database VmiReg

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