Basic Information:

  VIRBase ID:  

VHID00394731

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART2-3p:  MIMAT0004744          SLC44A5:  NM_001320283     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART2-3p	SLC44A5
miRBase Accession/Entrez ID	MIMAT0004744	204962
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CTL5

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC44A5	chr1:75954056(-) A-I      intronic chr1:75954108(-) A-I      intronic chr1:75954038(-) A-I      intronic chr1:75954064(-) A-I      intronic chr1:75954077(-) A-I      intronic chr1:75954093(-) A-I      intronic chr1:75954063(-) A-I      intronic chr1:75954039(-) A-I      intronic chr1:75954042(-) A-I      intronic chr1:75954044(-) A-I      intronic chr1:75954047(-) A-I      intronic chr1:75783976(-) A-I      intronic chr1:75989273(-) A-I      intronic chr1:76038605(-) A-I      intronic chr1:75976638(-) A-I      intronic chr1:75824982(-) A-I      intronic chr1:75763108(-) A-I      intronic chr1:75976706(-) A-I      intronic chr1:75787778(-) A-I      intronic chr1:76075987(-) A-I      intronic chr1:75763165(-) A-I      intronic chr1:76075969(-) A-I      intronic chr1:75763245(-) A-I      intronic chr1:76047514(-) A-I      intronic chr1:76038648(-) A-I      intronic chr1:76001354(-) A-I      intronic chr1:76038678(-) A-I      intronic chr1:75763143(-) A-I      intronic chr1:75763243(-) A-I      intronic chr1:75763055(-) A-I      intronic chr1:76030472(-) A-I      intronic chr1:75954805(-) A-I      intronic chr1:76038761(-) A-I      intronic chr1:76035065(-) A-I      intronic chr1:75825279(-) A-I      intronic chr1:76076643(-) A-I      intronic chr1:75972752(-) A-I      intronic chr1:75762061(-) A-I      intronic chr1:75989280(-) A-I      intronic chr1:76069414(-) A-I      intronic chr1:75763166(-) A-I      intronic chr1:76038696(-) A-I      intronic chr1:76012101(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SLC44A5	chr1:75762061(-) A-I intron -    15342557 chr1:75763055(-) A-I intron -    15342557 chr1:75763108(-) A-I intron -    15342557 chr1:75763143(-) A-I intron -    15342557 chr1:75763165(-) A-I intron -    15342557 chr1:75763166(-) A-I intron -    15342557 chr1:75763243(-) A-I intron -    15342557 chr1:75763245(-) A-I intron -    15342557

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC44A5	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART2-3p
Interactor2: SLC44A5

Evidence Support:

Prediction-Evidence	PITA//Targetscan
Support Database	VmiReg