Basic Information:

  VIRBase ID:  

VHID00394414

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART2-3p:  MIMAT0004744          FMNL3:  NM_198900     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART2-3p	FMNL3
miRBase Accession/Entrez ID	MIMAT0004744	91010
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FHOD3//FRL2//WBP-3//WBP3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FMNL3	chr12:50053393(-) A-I      intronic chr12:50087233(-) A-I      intronic chr12:50053392(-) A-I      intronic chr12:50075951(-) A-I      intronic chr12:50053385(-) A-I      intronic chr12:50053376(-) A-I      intronic chr12:50053363(-) A-I      intronic chr12:50053361(-) A-I      intronic chr12:50053358(-) A-I      intronic chr12:50079145(-) A-I      intronic chr12:50084743(-) A-I      intronic chr12:50075080(-) A-I      intronic chr12:50053410(-) A-I      intronic chr12:50053415(-) A-I      intronic chr12:50087218(-) A-I      intronic chr12:50087229(-) A-I      intronic chr12:50087517(-) A-I      intronic chr12:50081117(-) A-I      intronic chr12:50081096(-) A-I      intronic chr12:50058106(-) A-I      intronic chr12:50081095(-) A-I      intronic chr12:50081081(-) A-I      intronic chr12:50081071(-) A-I      intronic chr12:50081056(-) A-I      intronic chr12:50081046(-) A-I      intronic chr12:50087524(-) A-I      intronic chr12:50081044(-) A-I      intronic chr12:50081021(-) A-I      intronic chr12:50080279(-) A-I      intronic chr12:50087569(-) A-I      intronic chr12:50080253(-) A-I      intronic chr12:50080197(-) A-I      intronic chr12:50071784(-) A-I      intronic chr12:50080191(-) A-I      intronic chr12:50080168(-) A-I      intronic chr12:50087610(-) A-I      intronic chr12:50080047(-) A-I      intronic chr12:50087976(-) A-I      intronic chr12:50080045(-) A-I      intronic chr12:50079814(-) A-I      intronic chr12:50079774(-) A-I      intronic chr12:50079738(-) A-I      intronic chr12:50072439(-) A-I      intronic chr12:50079731(-) A-I      intronic chr12:50079606(-) A-I      intronic chr12:50079188(-) A-I      intronic chr12:50079101(-) A-I      intronic chr12:50076373(-) A-I      intronic chr12:50076125(-) A-I      intronic chr12:50075992(-) A-I      intronic chr12:50075939(-) A-I      intronic chr12:50075613(-) A-I      intronic chr12:50075592(-) A-I      intronic chr12:50075584(-) A-I      intronic chr12:50075583(-) A-I      intronic chr12:50073430(-) A-I      intronic chr12:50072441(-) A-I      intronic chr12:50072440(-) A-I      intronic chr12:50054673(-) A-I      intronic chr12:50087228(-) A-I      intronic chr12:50063539(-) A-I      intronic chr12:50054674(-) A-I      intronic chr12:50072357(-) A-I      intronic chr12:50063532(-) A-I      intronic chr12:50072348(-) A-I      intronic chr12:50082819(-) A-I      intronic chr12:50084731(-) A-I      intronic chr12:50081142(-) A-I      intronic chr12:50087221(-) A-I      intronic chr12:50082779(-) A-I      intronic chr12:50081045(-) A-I      intronic chr12:50087208(-) A-I      intronic chr12:50081148(-) A-I      intronic chr12:50084744(-) A-I      intronic chr12:50082818(-) A-I      intronic chr12:50087437(-) A-I      intronic chr12:50087435(-) A-I      intronic chr12:50087370(-) A-I      intronic chr12:50082773(-) A-I      intronic chr12:50087330(-) A-I      intronic chr12:50087289(-) A-I      intronic chr12:50081126(-) A-I      intronic chr12:50082792(-) A-I      intronic chr12:50054632(-) A-I      intronic chr12:50072425(-) A-I      intronic chr12:50083442(-) A-I      intronic chr12:50084714(-) A-I      intronic chr12:50080028(-) A-I      intronic chr12:50088595(-) A-I      intronic chr12:50079632(-) A-I      intronic chr12:50071761(-) A-I      intronic chr12:50084739(-) A-I      intronic chr12:50073479(-) A-I      intronic chr12:50087596(-) A-I      intronic chr12:50076381(-) A-I      intronic chr12:50079806(-) A-I      intronic chr12:50083460(-) A-I      intronic chr12:50081015(-) A-I      intronic chr12:50079964(-) A-I      intronic chr12:50054495(-) A-I      intronic chr12:50075560(-) A-I      intronic chr12:50076291(-) A-I      intronic chr12:50075368(-) A-I      intronic chr12:50087638(-) A-I      intronic chr12:50053476(-) A-I      intronic chr12:50075156(-) A-I      intronic chr12:50082801(-) A-I      intronic chr12:50087824(-) A-I      intronic chr12:50072185(-) A-I      intronic chr12:50081295(-) A-I      intronic chr12:50054750(-) A-I      intronic chr12:50079767(-) A-I      intronic chr12:50072384(-) A-I      intronic chr12:50076265(-) A-I      intronic chr12:50079924(-) A-I      intronic chr12:50094680(-) A-I      intronic chr12:50072105(-) A-I      intronic chr12:50087529(-) A-I      intronic chr12:50079787(-) A-I      intronic chr12:50079925(-) A-I      intronic chr12:50079023(-) A-I      intronic chr12:50087299(-) A-I      intronic chr12:50083458(-) A-I      intronic chr12:50088449(-) A-I      intronic chr12:50080000(-) A-I      intronic chr12:50080092(-) A-I      intronic chr12:50075457(-) A-I      intronic chr12:50054575(-) A-I      intronic chr12:50083494(-) A-I      intronic chr12:50084662(-) A-I      intronic chr12:50087325(-) A-I      intronic chr12:50075443(-) A-I      intronic chr12:50094762(-) A-I      intronic chr12:50080942(-) A-I      intronic chr12:50053400(-) A-I      intronic chr12:50088648(-) A-I      intronic chr12:50088527(-) A-I      intronic chr12:50079033(-) A-I      intronic chr12:50088657(-) A-I      intronic chr12:50079684(-) A-I      intronic chr12:50084704(-) A-I      intronic chr12:50079593(-) A-I      intronic chr12:50087570(-) A-I      intronic chr12:50087869(-) A-I      intronic chr12:50085652(-) A-I      intronic chr12:50087902(-) A-I      intronic chr12:50075193(-) A-I      intronic chr12:50079133(-) A-I      intronic chr12:50087975(-) A-I      intronic chr12:50079647(-) A-I      intronic chr12:50084779(-) A-I      intronic chr12:50080298(-) A-I      intronic chr12:50080252(-) A-I      intronic chr12:50084655(-) A-I      intronic chr12:50081080(-) A-I      intronic chr12:50081273(-) A-I      intronic chr12:50079050(-) A-I      intronic chr12:50063449(-) A-I      intronic chr12:50054754(-) A-I      intronic chr12:50079605(-) A-I      intronic chr12:50079201(-) A-I      intronic chr12:50084640(-) A-I      intronic chr12:50084702(-) A-I      intronic chr12:50073520(-) A-I      intronic chr12:50083272(-) A-I      intronic chr12:50075559(-) A-I      intronic chr12:50079163(-) A-I      intronic chr12:50063493(-) A-I      intronic chr12:50088450(-) A-I      intronic chr12:50080969(-) A-I      intronic chr12:50076304(-) A-I      intronic chr12:50080274(-) A-I      intronic chr12:50080163(-) A-I      intronic chr12:50083247(-) A-I      intronic chr12:50087246(-) A-I      intronic chr12:50087301(-) A-I      intronic chr12:50087257(-) A-I      intronic chr12:50086072(-) A-I      intronic chr12:50076030(-) A-I      intronic chr12:50080249(-) A-I      intronic chr12:50079239(-) A-I      intronic chr12:50085702(-) A-I      intronic chr12:50084758(-) A-I      intronic chr12:50054612(-) A-I      intronic chr12:50071688(-) A-I      intronic chr12:50087856(-) A-I      intronic chr12:50072519(-) A-I      intronic chr12:50080152(-) A-I      intronic chr12:50076409(-) A-I      intronic chr12:50076348(-) A-I      intronic chr12:50075155(-) A-I      intronic chr12:50072374(-) A-I      intronic chr12:50083301(-) A-I      intronic chr12:50081070(-) A-I      intronic chr12:50082849(-) A-I      intronic chr12:50079123(-) A-I      intronic chr12:50094779(-) A-I      intronic chr12:50083423(-) A-I      intronic chr12:50075620(-) A-I      intronic chr12:50084780(-) A-I      intronic chr12:50054620(-) A-I      intronic chr12:50088573(-) A-I      intronic chr12:50075123(-) A-I      intronic chr12:50054622(-) A-I      intronic chr12:50075544(-) A-I      intronic chr12:50079804(-) A-I      intronic chr12:50095460(-) A-I      intronic chr12:50081103(-) A-I      intronic chr12:50076134(-) A-I      intronic chr12:50081170(-) A-I      intronic chr12:50075401(-) A-I      intronic chr12:50080175(-) A-I      intronic chr12:50079728(-) A-I      intronic chr12:50072454(-) A-I      intronic chr12:50080120(-) A-I      intronic chr12:50076380(-) A-I      intronic chr12:50053332(-) A-I      intronic chr12:50072951(-) A-I      intronic chr12:50080108(-) A-I      intronic chr12:50083326(-) A-I      intronic chr12:50080029(-) A-I      intronic chr12:50081093(-) A-I      intronic chr12:50083400(-) A-I      intronic chr12:50094780(-) A-I      intronic chr12:50053396(-) A-I      intronic chr12:50079024(-) A-I      intronic chr12:50087315(-) A-I      intronic chr12:50076247(-) A-I      intronic chr12:50083391(-) A-I      intronic chr12:50087690(-) A-I      intronic chr12:50081041(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FMNL3	chr12:50072951(-) A-G intron -    22484847 chr12:50053332(-) A-G intron -    22484847 chr12:50054750(-) A-G intron -    22484847 chr12:50054754(-) A-G intron -    22484847 chr12:50072384(-) A-G intron -    22484847 chr12:50072425(-) A-G intron -    22484847 chr12:50076409(-) A-G intron -    22484847 chr12:50053396(-) A-G intron -    22484847 chr12:50053476(-) A-G intron -    22484847 chr12:50054500(-) T-C intron -    22484847 chr12:50054573(-) G-A intron -    22484847 chr12:50054575(-) A-G intron -    22484847 chr12:50054622(-) A-G intron -    22484847 chr12:50072105(-) A-G intron -    22484847 chr12:50072185(-) A-G intron -    22484847 chr12:50075457(-) A-G intron -    22484847 chr12:50075620(-) A-G intron -    22484847 chr12:50076247(-) A-G intron -    22484847 chr12:50076265(-) A-G intron -    22484847 chr12:50076380(-) A-G intron -    22484847 chr12:50076381(-) A-G intron -    22484847 chr12:50079023(-) A-G intron -    22484847 chr12:50079024(-) A-G intron -    22484847 chr12:50079033(-) A-G intron -    22484847 chr12:50079123(-) A-G intron -    22484847 chr12:50079133(-) A-G intron -    22484847 chr12:50079163(-) A-G intron -    22484847 chr12:50079201(-) A-G intron -    22484847 chr12:50079239(-) A-G intron -    22484847 chr12:50079605(-) A-G intron -    22484847 chr12:50079632(-) A-G intron -    22484847 chr12:50079647(-) A-G intron -    22484847 chr12:50079728(-) A-G intron -    22484847 chr12:50079767(-) A-G intron -    22484847 chr12:50079787(-) A-G intron -    22484847 chr12:50079804(-) A-G intron -    22484847 chr12:50079806(-) A-G intron -    22484847 chr12:50079925(-) A-G intron -    22484847 chr12:50080029(-) A-G intron -    22484847 chr12:50080152(-) A-G intron -    22484847 chr12:50080163(-) A-G intron -    22484847 chr12:50080175(-) A-G intron -    22484847 chr12:50080249(-) A-G intron -    22484847 chr12:50080252(-) A-G intron -    22484847 chr12:50080274(-) A-G intron -    22484847 chr12:50080298(-) A-G intron -    22484847 chr12:50081015(-) A-G intron -    22484847 chr12:50081070(-) A-G intron -    22484847 chr12:50081080(-) A-G intron -    22484847 chr12:50081103(-) A-G intron -    22484847 chr12:50081170(-) A-G intron -    22484847 chr12:50081295(-) A-G intron -    22484847 chr12:50082801(-) A-G intron -    22484847 chr12:50082849(-) A-G intron -    22484847 chr12:50083326(-) A-G intron -    22484847 chr12:50083458(-) A-G intron -    22484847 chr12:50083460(-) A-G intron -    22484847 chr12:50084640(-) A-G intron -    22484847 chr12:50084655(-) A-G intron -    22484847 chr12:50084779(-) A-G intron -    22484847 chr12:50085702(-) A-G intron -    22484847 chr12:50087570(-) A-G intron -    22484847 chr12:50087596(-) A-G intron -    22484847 chr12:50087624(-) A-C intron -    22484847 chr12:50087690(-) A-G intron -    22484847 chr12:50087902(-) A-G intron -    22484847 chr12:50087975(-) A-G intron -    22484847 chr12:50088449(-) A-G intron -    22484847 chr12:50088450(-) A-G intron -    22484847 chr12:50088527(-) A-G intron -    22484847 chr12:50088595(-) A-G intron -    22484847 chr12:50088648(-) A-G intron -    22484847 chr12:50088657(-) A-G intron -    22484847 chr12:50094680(-) A-G intron -    22484847 chr12:50094762(-) A-G intron -    22484847 chr12:50094779(-) A-G intron -    22484847 chr12:50094780(-) A-G intron -    22484847 chr12:50094861(-) G-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FMNL3	chr12:50031088-50031089(-) m6A 3'UTR       - chr12:50033293-50033294(-) m6A 3'UTR       27773535 chr12:50033313-50033314(-) m6A 3'UTR       27773535 chr12:50034498-50034499(-) m6A 3'UTR       27773535 chr12:50034507-50034508(-) m6A 3'UTR       27773535 chr12:50034520-50034521(-) m6A 3'UTR       27773535 chr12:50034555-50034556(-) m6A 3'UTR       27773535 chr12:50034622-50034623(-) m6A 3'UTR       27773535 chr12:50034641-50034642(-) m6A 3'UTR       27773535 chr12:50034995-50034996(-) m6A 3'UTR       27773535 chr12:50036260-50036261(-) m6A 3'UTR       24209618//25456834//24981863//27371828//27773536//22608085 chr12:50036307-50036308(-) m6A 3'UTR       24209618//25456834//24981863//28052920//27371828//27773536//22608085 chr12:50036333-50036334(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr12:50036363-50036364(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22608085 chr12:50036440-50036441(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr12:50036472-50036473(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085 chr12:50036513-50036514(-) m6A 3'UTR       24209618//25456834//24981863//27371828//22608085 chr12:50036615-50036616(-) m6A 3'UTR       24209618//25456834//24981863//27371828//22608085 chr12:50036672-50036673(-) m6A 3'UTR       24209618//25456834//27773535 chr12:50036682-50036683(-) m6A 3'UTR       24209618//25456834//27773535 chr12:50036841-50036842(-) m6A 3'UTR       27773535 chr12:50036863-50036864(-) m6A 3'UTR       27773535 chr12:50036896-50036897(-) m6A 3'UTR       25456834//27371828 chr12:50036920-50036921(-) m6A 3'UTR       25456834//27371828//22608085 chr12:50037578-50037579(-) m6A 3'UTR       24981863 chr12:50037583-50037584(-) m6A 3'UTR       24981863 chr12:50037648-50037649(-) m6A 3'UTR       24981863 chr12:50037987-50037988(-) m6A 3'UTR       27371828 chr12:50038001-50038002(-) m6A 3'UTR       27371828 chr12:50038061-50038062(-) m6A 3'UTR       27371828 chr12:50038066-50038067(-) m6A 3'UTR       27371828 chr12:50038072-50038073(-) m6A 3'UTR       27371828 chr12:50038141-50038142(-) m6A 3'UTR       27371828 chr12:50038149-50038150(-) m6A 3'UTR       27371828 chr12:50038571-50038572(-) m6A 3'UTR       27371828 chr12:50038588-50038589(-) m6A 3'UTR       27371828 chr12:50040679-50040680(-) m6A CDS//exon       27371828 chr12:50040720-50040721(-) m6A CDS//exon       28052920//27371828 chr12:50040775-50040776(-) m6A CDS//exon       28052920//27371828 chr12:50041070-50041071(-) m6A CDS//exon       28052920//27371828 chr12:50041142-50041143(-) m6A CDS//exon       27371828 chr12:50041541-50041542(-) m6A CDS//exon       27371828 chr12:50045807-50045808(-) m6A CDS//exon       27773535 chr12:50045873-50045874(-) m6A CDS//exon       27773535 chr12:50045981-50045982(-) m6A CDS//exon       24209618//27773535//27371828 chr12:50045991-50045992(-) m6A CDS//exon       24209618//28052920//27773535//27371828 chr12:50047023-50047024(-) m6A CDS       24209618//27773535//27371828 chr12:50047056-50047057(-) m6A CDS       24209618//24981863//27773535//27371828 chr12:50047075-50047076(-) m6A CDS       24209618//24981863//27773535//27371828 chr12:50047090-50047091(-) m6A CDS       24209618//27773535//27371828 chr12:50047560-50047561(-) m6A CDS       24209618//27773535 chr12:50047601-50047602(-) m6A CDS       27773535 chr12:50101067-50101068(-) m6A 5'UTR//intron       25456834//27371828//27773536 chr12:50101102-50101103(-) m6A 5'UTR//intron       25456834//27371828//27773536 chr12:50101112-50101113(-) m6A 5'UTR//intron       25456834//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FMNL3	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART2-3p
Interactor2: FMNL3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg