Detail Information

Basic Information:


  VIRBase ID:  

VHID00394351

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART2-3p:           EBPL:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART2-3p EBPL
miRBase
Accession/Entrez ID		 MIMAT0004744 84650
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - EBRP

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR EBPL
chr13:50264042(-) A-I      intronic
chr13:50263624(-) A-I      intronic
chr13:50240907(-) A-I      intronic
chr13:50263591(-) A-I      intronic
chr13:50247028(-) A-I      intronic
chr13:50264081(-) A-I      intronic
chr13:50264075(-) A-I      intronic
chr13:50240904(-) A-I      intronic
chr13:50242588(-) A-I      NonSyn:Tyr->Cys
chr13:50242520(-) A-I      NonSyn:Ser->Gly
chr13:50242516(-) A-I      NonSyn:Gln->Arg
chr13:50242653(-) A-I      Syn:Ser->Ser
chr13:50242598(-) A-I      NonSyn:Ser->Gly
chr13:50237022(-) A-I      intronic
chr13:50237880(-) A-I      intronic
chr13:50238271(-) A-I      intronic
chr13:50238288(-) A-I      intronic
chr13:50239349(-) A-I      intronic
chr13:50239352(-) A-I      intronic
chr13:50239379(-) A-I      intronic
chr13:50239536(-) A-I      intronic
chr13:50239564(-) A-I      intronic
chr13:50239580(-) A-I      intronic
chr13:50239582(-) A-I      intronic
chr13:50239610(-) A-I      intronic
chr13:50239722(-) A-I      intronic
chr13:50239747(-) A-I      intronic
chr13:50240603(-) A-I      intronic
chr13:50240654(-) A-I      intronic
chr13:50240667(-) A-I      intronic
chr13:50240675(-) A-I      intronic
chr13:50240726(-) A-I      intronic
chr13:50240736(-) A-I      intronic
chr13:50240748(-) A-I      intronic
chr13:50240761(-) A-I      intronic
chr13:50240821(-) A-I      intronic
chr13:50240918(-) A-I      intronic
chr13:50240968(-) A-I      intronic
chr13:50243126(-) A-I      intronic
chr13:50243127(-) A-I      intronic
chr13:50243306(-) A-I      intronic
chr13:50246962(-) A-I      intronic
chr13:50247087(-) A-I      intronic
chr13:50247746(-) A-I      intronic
chr13:50247750(-) A-I      intronic
chr13:50247774(-) A-I      intronic
chr13:50253657(-) A-I      intronic
chr13:50253811(-) A-I      intronic
chr13:50253812(-) A-I      intronic
chr13:50254809(-) A-I      intronic
chr13:50254810(-) A-I      intronic
chr13:50254871(-) A-I      intronic
chr13:50254875(-) A-I      intronic
chr13:50254876(-) A-I      intronic
chr13:50254911(-) A-I      intronic
chr13:50254935(-) A-I      intronic
chr13:50255523(-) A-I      intronic
chr13:50255535(-) A-I      intronic
chr13:50255564(-) A-I      intronic
chr13:50255591(-) A-I      intronic
chr13:50255600(-) A-I      intronic
chr13:50257178(-) A-I      intronic
chr13:50257206(-) A-I      intronic
chr13:50257215(-) A-I      intronic
chr13:50257247(-) A-I      intronic
chr13:50257499(-) A-I      intronic
chr13:50262697(-) A-I      intronic
chr13:50257610(-) A-I      intronic
chr13:50239725(-) A-I      intronic
chr13:50257474(-) A-I      intronic
chr13:50257604(-) A-I      intronic
chr13:50237045(-) A-I      intronic
chr13:50239546(-) A-I      intronic
chr13:50257213(-) A-I      intronic
chr13:50259968(-) A-I      intronic
chr13:50239442(-) A-I      intronic
chr13:50239792(-) A-I      intronic
chr13:50253072(-) A-I      intronic
chr13:50253028(-) A-I      intronic
chr13:50254716(-) A-I      intronic
chr13:50255512(-) A-I      intronic
chr13:50257618(-) A-I      intronic
chr13:50239572(-) A-I      intronic
chr13:50239583(-) A-I      intronic
chr13:50254919(-) A-I      intronic
chr13:50252999(-) A-I      intronic
chr13:50255645(-) A-I      intronic
chr13:50253066(-) A-I      intronic
chr13:50259926(-) A-I      intronic
chr13:50239680(-) A-I      intronic
chr13:50258544(-) A-I      intronic
chr13:50259900(-) A-I      intronic
chr13:50247612(-) A-I      intronic
chr13:50253730(-) A-I      intronic
chr13:50263755(-) A-I      intronic
chr13:50262836(-) A-I      intronic
chr13:50253026(-) A-I      intronic
chr13:50264164(-) A-I      intronic
chr13:50257383(-) A-I      intronic
chr13:50240917(-) A-I      intronic
chr13:50259170(-) A-I      intronic
chr13:50238205(-) A-I      intronic
chr13:50239437(-) A-I      intronic
chr13:50258615(-) A-I      intronic
chr13:50258749(-) A-I      intronic
chr13:50259104(-) A-I      intronic
chr13:50259887(-) A-I      intronic
chr13:50259923(-) A-I      intronic
chr13:50261034(-) A-I      intronic
chr13:50261046(-) A-I      intronic
chr13:50261056(-) A-I      intronic
chr13:50261096(-) A-I      intronic
chr13:50262669(-) A-I      intronic
chr13:50262733(-) A-I      intronic
chr13:50263704(-) A-I      intronic
chr13:50264056(-) A-I      intronic
chr13:50264083(-) A-I      intronic
chr13:50264113(-) A-I      intronic
chr13:50264205(-) A-I      intronic
chr13:50242466(-) A-I      3'UTR
chr13:50242634(-) A-I      NonSyn:Arg->Gly
chr13:50241884(-) A-I      intronic
chr13:50248328(-) A-I      intronic
chr13:50248331(-) A-I      intronic
chr13:50239761(-) A-I      intronic
chr13:50238279(-) A-I      intronic
chr13:50239746(-) A-I      intronic
chr13:50261123(-) A-I      intronic
chr13:50239721(-) A-I      intronic
chr13:50240944(-) A-I      intronic
chr13:50247710(-) A-I      intronic
chr13:50264199(-) A-I      intronic
chr13:50240684(-) A-I      intronic
chr13:50259102(-) A-I      intronic
chr13:50253806(-) A-I      intronic
chr13:50254914(-) A-I      intronic
chr13:50263649(-) A-I      intronic
chr13:50258728(-) A-I      intronic
chr13:50238185(-) A-I      intronic
chr13:50238225(-) A-I      intronic
chr13:50260967(-) A-I      intronic
chr13:50259952(-) A-I      intronic
chr13:50239259(-) A-I      intronic
chr13:50255487(-) A-I      intronic
chr13:50258602(-) A-I      intronic
chr13:50243475(-) A-I      intronic
chr13:50259776(-) A-I      intronic
chr13:50247705(-) A-I      intronic
chr13:50240076(-) A-I      intronic
chr13:50258683(-) A-I      intronic
chr13:50253782(-) A-I      intronic
chr13:50247671(-) A-I      intronic
chr13:50264103(-) A-I      intronic
chr13:50259922(-) A-I      intronic
chr13:50257315(-) A-I      intronic
chr13:50247113(-) A-I      intronic
chr13:50247776(-) A-I      intronic
chr13:50250538(-) A-I      intronic
chr13:50239679(-) A-I      intronic
chr13:50258699(-) A-I      intronic
chr13:50257567(-) A-I      intronic
chr13:50246939(-) A-I      intronic
chr13:50247148(-) A-I      intronic
chr13:50254778(-) A-I      intronic
chr13:50238305(-) A-I      intronic
chr13:50254823(-) A-I      intronic
chr13:50240644(-) A-I      intronic
chr13:50240939(-) A-I      intronic
chr13:50236227(-) A-I      intronic
chr13:50240926(-) A-I      intronic
chr13:50258785(-) A-I      intronic
chr13:50255700(-) A-I      intronic
chr13:50254715(-) A-I      intronic
chr13:50238383(-) A-I      intronic
chr13:50239702(-) A-I      intronic
chr13:50253766(-) A-I      intronic
chr13:50259118(-) A-I      intronic
chr13:50239796(-) A-I      intronic
chr13:50255646(-) A-I      intronic
chr13:50257580(-) A-I      intronic
chr13:50240943(-) A-I      intronic
chr13:50258604(-) A-I      intronic
chr13:50259166(-) A-I      intronic
chr13:50247037(-) A-I      intronic
chr13:50257384(-) A-I      intronic
chr13:50254872(-) A-I      intronic
chr13:50239545(-) A-I      intronic
chr13:50261218(-) A-I      intronic
chr13:50257314(-) A-I      intronic
chr13:50257280(-) A-I      intronic
chr13:50239385(-) A-I      intronic
chr13:50237900(-) A-I      intronic
chr13:50240601(-) A-I      intronic
chr13:50240659(-) A-I      intronic
chr13:50255532(-) A-I      intronic
chr13:50263583(-) A-I      intronic
chr13:50247114(-) A-I      intronic
chr13:50254836(-) A-I      intronic
chr13:50240914(-) A-I      intronic
chr13:50239736(-) A-I      intronic
chr13:50247149(-) A-I      intronic
chr13:50245346(-) A-I      intronic
chr13:50247683(-) A-I      intronic
chr13:50241816(-) A-I      intronic
chr13:50243154(-) A-I      intronic
chr13:50263582(-) A-I      intronic
chr13:50264074(-) A-I      intronic
chr13:50248316(-) A-I      intronic
chr13:50257657(-) A-I      intronic
chr13:50247678(-) A-I      intronic
chr13:50259754(-) A-I      intronic
chr13:50261142(-) A-I      intronic
chr13:50263626(-) A-I      intronic
chr13:50259193(-) A-I      intronic
chr13:50258759(-) A-I      intronic
chr13:50254792(-) A-I      intronic
chr13:50238376(-) A-I      intronic
chr13:50253918(-) A-I      intronic
chr13:50239411(-) A-I      intronic
chr13:50241904(-) A-I      intronic
chr13:50264120(-) A-I      intronic
chr13:50239737(-) A-I      intronic
chr13:50240973(-) A-I      intronic
chr13:50264273(-) A-I      intronic
chr13:50264204(-) A-I      intronic
chr13:50239475(-) A-I      intronic
chr13:50259153(-) A-I      intronic
chr13:50237829(-) A-I      intronic
chr13:50239548(-) A-I      intronic
chr13:50253778(-) A-I      intronic
chr13:50253894(-) A-I      intronic
chr13:50247853(-) A-I      intronic
chr13:50264041(-) A-I      intronic
chr13:50264174(-) A-I      intronic
chr13:50239666(-) A-I      intronic
chr13:50264278(-) A-I      intronic
chr13:50263614(-) A-I      intronic
chr13:50264123(-) A-I      intronic
chr13:50239332(-) A-I      intronic
chr13:50241894(-) A-I      intronic
chr13:50245341(-) A-I      intronic
chr13:50250493(-) A-I      intronic
chr13:50243367(-) A-I      intronic
chr13:50247609(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED EBPL
chr13:50239385(-) A-G intron -    22484847
chr13:50239548(-) A-G intron -    22484847
chr13:50239796(-) A-G intron -    22484847
chr13:50253066(-) A-G intron -    22484847
chr13:50262621(-) G-A intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase EBPL
chr13:50234995-50234996(-) Y 3'UTR//exon       26075521
chr13:50235064-50235065(-) m6A 3'UTR//exon       24981863
chr13:50235086-50235087(-) m6A 3'UTR//exon       24981863
chr13:50235093-50235094(-) m6A 3'UTR//exon       24981863
chr13:50235102-50235103(-) m6A 3'UTR//exon       24981863
chr13:50235129-50235130(-) m6A 3'UTR//CDS//exon       24981863
chr13:50235154-50235155(-) m6A 3'UTR//CDS//exon       24981863
chr13:50235181-50235182(-) m6A 3'UTR//CDS//exon       24981863
chr13:50260715-50260716(-) m6A exon//intron       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate EBPL
Chromatin K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART2-3p
Interactor2: EBPL

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA
Support Database RepTar//VmiReg

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