Basic Information:

  VIRBase ID:  

VHID00393406

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART2-3p:  MIMAT0004744          SEC23IP:  NR_037771     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART2-3p	SEC23IP
miRBase Accession/Entrez ID	MIMAT0004744	11196
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	iPLA1beta//MSTP053//P125//P125A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SEC23IP	chr10:121697017(+) A-I      intronic chr10:121668948(+) A-I      intronic chr10:121696980(+) A-I      intronic chr10:121670264(+) A-I      intronic chr10:121668977(+) A-I      intronic chr10:121670227(+) A-I      intronic chr10:121670220(+) A-I      intronic chr10:121697027(+) A-I      intronic chr10:121670216(+) A-I      intronic chr10:121668983(+) A-I      intronic chr10:121699308(+) A-I      intronic chr10:121673121(+) A-I      intronic chr10:121668939(+) A-I      intronic chr10:121699307(+) A-I      intronic chr10:121698560(+) A-I      intronic chr10:121696984(+) A-I      intronic chr10:121698834(+) A-I      intronic chr10:121699005(+) A-I      intronic chr10:121666188(+) A-I      intronic chr10:121696962(+) A-I      intronic chr10:121698592(+) A-I      intronic chr10:121695891(+) A-I      intronic chr10:121696979(+) A-I      intronic chr10:121696961(+) A-I      intronic chr10:121696888(+) A-I      intronic chr10:121654775(+) A-I      intronic chr10:121696626(+) A-I      intronic chr10:121695913(+) A-I      intronic chr10:121695907(+) A-I      intronic chr10:121695893(+) A-I      intronic chr10:121695883(+) A-I      intronic chr10:121694842(+) A-I      intronic chr10:121694839(+) A-I      intronic chr10:121673552(+) A-I      intronic chr10:121666623(+) A-I      intronic chr10:121673477(+) A-I      intronic chr10:121673140(+) A-I      intronic chr10:121695817(+) A-I      intronic chr10:121673107(+) A-I      intronic chr10:121668961(+) A-I      intronic chr10:121684061(+) A-I      intronic chr10:121668890(+) A-I      intronic chr10:121666714(+) A-I      intronic chr10:121666297(+) A-I      intronic chr10:121666168(+) A-I      intronic chr10:121661748(+) A-I      intronic chr10:121661470(+) A-I      intronic chr10:121661226(+) A-I      intronic chr10:121653252(+) A-I      intronic chr10:121653206(+) A-I      intronic chr10:121653087(+) A-I      intronic chr10:121696419(+) A-I      intronic chr10:121698638(+) A-I      intronic chr10:121696013(+) A-I      intronic chr10:121696581(+) A-I      intronic chr10:121699968(+) A-I      intronic chr10:121699037(+) A-I      intronic chr10:121673143(+) A-I      intronic chr10:121665687(+) A-I      intronic chr10:121696988(+) A-I      intronic chr10:121666630(+) A-I      intronic chr10:121695924(+) A-I      intronic chr10:121676445(+) A-I      intronic chr10:121695828(+) A-I      intronic chr10:121699347(+) A-I      intronic chr10:121696575(+) A-I      intronic chr10:121695919(+) A-I      intronic chr10:121699272(+) A-I      intronic chr10:121699236(+) A-I      intronic chr10:121696648(+) A-I      intronic chr10:121699336(+) A-I      intronic chr10:121669184(+) A-I      intronic chr10:121698833(+) A-I      intronic chr10:121699884(+) A-I      intronic chr10:121697088(+) A-I      intronic chr10:121698710(+) A-I      intronic chr10:121695927(+) A-I      intronic chr10:121673266(+) A-I      intronic chr10:121697621(+) A-I      intronic chr10:121699398(+) A-I      intronic chr10:121699946(+) A-I      intronic chr10:121699817(+) A-I      intronic chr10:121699731(+) A-I      intronic chr10:121699344(+) A-I      intronic chr10:121699263(+) A-I      intronic chr10:121696649(+) A-I      intronic chr10:121698989(+) A-I      intronic chr10:121698740(+) A-I      intronic chr10:121698660(+) A-I      intronic chr10:121698596(+) A-I      intronic chr10:121697063(+) A-I      intronic chr10:121699483(+) A-I      intronic chr10:121668967(+) A-I      intronic chr10:121665555(+) A-I      intronic chr10:121695944(+) A-I      intronic chr10:121699410(+) A-I      intronic chr10:121699357(+) A-I      intronic chr10:121665609(+) A-I      intronic chr10:121698815(+) A-I      intronic chr10:121666205(+) A-I      intronic chr10:121671011(+) A-I      intronic chr10:121696982(+) A-I      intronic chr10:121698939(+) A-I      intronic chr10:121666187(+) A-I      intronic chr10:121669194(+) A-I      intronic chr10:121673478(+) A-I      intronic chr10:121699040(+) A-I      intronic chr10:121669260(+) A-I      intronic chr10:121670294(+) A-I      intronic chr10:121696517(+) A-I      intronic chr10:121653221(+) A-I      intronic chr10:121661777(+) A-I      intronic chr10:121661228(+) A-I      intronic chr10:121666631(+) A-I      intronic chr10:121695859(+) A-I      intronic chr10:121671189(+) A-I      intronic chr10:121673414(+) A-I      intronic chr10:121673525(+) A-I      intronic chr10:121696421(+) A-I      intronic chr10:121699839(+) A-I      intronic chr10:121696584(+) A-I      intronic chr10:121670906(+) A-I      intronic chr10:121665756(+) A-I      intronic chr10:121666356(+) A-I      intronic chr10:121698970(+) A-I      intronic chr10:121666665(+) A-I      intronic chr10:121699374(+) A-I      intronic chr10:121661379(+) A-I      intronic chr10:121670912(+) A-I      intronic chr10:121699175(+) A-I      intronic chr10:121673239(+) A-I      intronic chr10:121698960(+) A-I      intronic chr10:121665655(+) A-I      intronic chr10:121664484(+) A-I      intronic chr10:121696566(+) A-I      intronic chr10:121699022(+) A-I      intronic chr10:121666729(+) A-I      intronic chr10:121653215(+) A-I      intronic chr10:121695816(+) A-I      intronic chr10:121699036(+) A-I      intronic chr10:121694918(+) A-I      intronic chr10:121695844(+) A-I      intronic chr10:121699373(+) A-I      intronic chr10:121669270(+) A-I      intronic chr10:121654785(+) A-I      intronic chr10:121699189(+) A-I      intronic chr10:121696464(+) A-I      intronic chr10:121696991(+) A-I      intronic chr10:121699780(+) A-I      intronic chr10:121698973(+) A-I      intronic chr10:121699881(+) A-I      intronic chr10:121698566(+) A-I      intronic chr10:121697015(+) A-I      intronic chr10:121699452(+) A-I      intronic chr10:121699973(+) A-I      intronic chr10:121666701(+) A-I      intronic chr10:121670825(+) A-I      intronic chr10:121696016(+) A-I      intronic chr10:121699906(+) A-I      intronic chr10:121699108(+) A-I      intronic chr10:121695935(+) A-I      intronic chr10:121697018(+) A-I      intronic chr10:121670900(+) A-I      intronic chr10:121673145(+) A-I      intronic chr10:121696006(+) A-I      intronic chr10:121696529(+) A-I      intronic chr10:121699025(+) A-I      intronic chr10:121698567(+) A-I      intronic chr10:121699053(+) A-I      intronic chr10:121668936(+) A-I      intronic chr10:121671137(+) A-I      intronic chr10:121665532(+) A-I      intronic chr10:121666661(+) A-I      intronic chr10:121657277(+) A-I      intronic chr10:121699121(+) A-I      intronic chr10:121699961(+) A-I      intronic chr10:121699034(+) A-I      intronic chr10:121699829(+) A-I      intronic chr10:121669242(+) A-I      intronic chr10:121695887(+) A-I      intronic chr10:121666285(+) A-I      intronic chr10:121698930(+) A-I      intronic chr10:121698938(+) A-I      intronic chr10:121696883(+) A-I      intronic chr10:121699960(+) A-I      intronic chr10:121669253(+) A-I      intronic chr10:121696899(+) A-I      intronic chr10:121696480(+) A-I      intronic chr10:121697011(+) A-I      intronic chr10:121696404(+) A-I      intronic chr10:121666249(+) A-I      intronic chr10:121699409(+) A-I      intronic chr10:121698978(+) A-I      intronic chr10:121699066(+) A-I      intronic chr10:121695782(+) A-I      intronic chr10:121659934(+) A-I      intronic chr10:121695904(+) A-I      intronic chr10:121699215(+) A-I      intronic chr10:121670873(+) A-I      intronic chr10:121698544(+) A-I      intronic chr10:121699320(+) A-I      intronic chr10:121699282(+) A-I      intronic chr10:121696565(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SEC23IP	chr10:121698544(+) A-I intron -    22327324 chr10:121695782(+) A-G intron -    22484847 chr10:121695816(+) A-G intron -    22484847 chr10:121695891(+) A-G intron -    22484847 chr10:121698544(+) A-G intron -    22484847 chr10:121698566(+) A-G intron -    22484847 chr10:121698567(+) A-G intron -    22484847 chr10:121698970(+) A-G intron -    22484847 chr10:121699053(+) A-G intron -    22484847 chr10:121699066(+) A-G intron -    22484847 chr10:121699320(+) A-G intron -    22484847 chr10:121699373(+) A-G intron -    22484847 chr10:121699960(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SEC23IP	chr10:121652308-121652309(+) m6A CDS//exon       24284625//24209618//24981863 chr10:121657799-121657800(+) m6A exon//intron       24284625//24209618//24981863//22608085 chr10:121657965-121657966(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr10:121657982-121657983(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr10:121658009-121658010(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr10:121658065-121658066(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:121658101-121658102(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:121658283-121658284(+) m6A CDS       24284625//24209618//24981863 chr10:121658390-121658391(+) m6A CDS       24284625 chr10:121658425-121658426(+) m6A CDS       24284625 chr10:121664001-121664002(+) m6A 3'UTR//intron       24981863 chr10:121664047-121664048(+) m6A 3'UTR//intron       24981863 chr10:121664095-121664096(+) m6A 3'UTR//intron       24981863 chr10:121680447-121680448(+) m6A CDS       24981863//27773535 chr10:121680477-121680478(+) m6A CDS       24981863//27773535 chr10:121680492-121680493(+) m6A CDS       24981863//27773535 chr10:121685597-121685598(+) m6A CDS       24981863 chr10:121685619-121685620(+) m6A CDS       24981863 chr10:121685626-121685627(+) m6A CDS       24981863 chr10:121685669-121685670(+) m6A CDS       24981863 chr10:121691721-121691722(+) m6A CDS//exon       24981863 chr10:121692558-121692559(+) m6A CDS//exon       24981863//27773535 chr10:121693283-121693284(+) m6A 3'UTR       24284625 chr10:121700158-121700159(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr10:121700248-121700249(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr10:121700253-121700254(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr10:121700260-121700261(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr10:121700295-121700296(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr10:121700312-121700313(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr10:121701193-121701194(+) Y 3'UTR//intron       26075521 chr10:121703969-121703970(+) m6A 3'UTR       - chr10:121703978-121703979(+) m6A 3'UTR       - chr10:121704017-121704018(+) m6A 3'UTR       - chr10:121704031-121704032(+) m6A 3'UTR       - chr10:121704060-121704061(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SEC23IP	Chromatin K562 cells     - Cytosol HeLa-S3 cells|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART2-3p
Interactor2: SEC23IP

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg