Basic Information:

  VIRBase ID:  

VHID00393135

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART2-3p:  MIMAT0004744          MTA1:  NM_004689     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART2-3p	MTA1
miRBase Accession/Entrez ID	MIMAT0004744	9112
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MTA1	chr14:105895323(+) A-I      intronic chr14:105895297(+) A-I      intronic chr14:105897728(+) A-I      intronic chr14:105924174(+) A-I      intronic chr14:105921109(+) A-I      intronic chr14:105910782(+) A-I      intronic chr14:105920103(+) A-I      intronic chr14:105918821(+) A-I      intronic chr14:105924151(+) A-I      intronic chr14:105918315(+) A-I      intronic chr14:105909895(+) A-I      intronic chr14:105919762(+) A-I      intronic chr14:105919914(+) A-I      intronic chr14:105924087(+) A-I      intronic chr14:105894177(+) A-I      intronic chr14:105894137(+) A-I      intronic chr14:105895703(+) A-I      intronic chr14:105909779(+) A-I      intronic chr14:105909826(+) A-I      intronic chr14:105910094(+) A-I      intronic chr14:105918245(+) A-I      intronic chr14:105895262(+) A-I      intronic chr14:105910137(+) A-I      intronic chr14:105921118(+) A-I      intronic chr14:105894244(+) A-I      intronic chr14:105909835(+) A-I      intronic chr14:105921099(+) A-I      intronic chr14:105894689(+) A-I      intronic chr14:105918857(+) A-I      intronic chr14:105909770(+) A-I      intronic chr14:105891875(+) A-I      intronic chr14:105894108(+) A-I      intronic chr14:105918181(+) A-I      intronic chr14:105895749(+) A-I      intronic chr14:105898681(+) A-I      intronic chr14:105921317(+) A-I      intronic chr14:105900239(+) A-I      intronic chr14:105900282(+) A-I      intronic chr14:105894102(+) A-I      intronic chr14:105902332(+) A-I      intronic chr14:105902512(+) A-I      intronic chr14:105902515(+) A-I      intronic chr14:105921267(+) A-I      intronic chr14:105921312(+) A-I      intronic chr14:105894170(+) A-I      intronic chr14:105894174(+) A-I      intronic chr14:105909728(+) A-I      intronic chr14:105921355(+) A-I      intronic chr14:105924182(+) A-I      intronic chr14:105924077(+) A-I      intronic chr14:105909764(+) A-I      intronic chr14:105921294(+) A-I      intronic chr14:105924053(+) A-I      intronic chr14:105909733(+) A-I      intronic chr14:105921464(+) A-I      intronic chr14:105910304(+) A-I      intronic chr14:105894101(+) A-I      intronic chr14:105918329(+) A-I      intronic chr14:105895195(+) A-I      intronic chr14:105929186(+) A-I      intronic chr14:105909821(+) A-I      intronic chr14:105921465(+) A-I      intronic chr14:105918350(+) A-I      intronic chr14:105921443(+) A-I      intronic chr14:105920043(+) A-I      intronic chr14:105918312(+) A-I      intronic chr14:105918818(+) A-I      intronic chr14:105900258(+) A-I      intronic chr14:105923999(+) A-I      intronic chr14:105910784(+) A-I      intronic chr14:105909902(+) A-I      intronic chr14:105894266(+) A-I      intronic chr14:105921372(+) A-I      intronic chr14:105924062(+) A-I      intronic chr14:105924171(+) A-I      intronic chr14:105924158(+) A-I      intronic chr14:105921426(+) A-I      intronic chr14:105924104(+) A-I      intronic chr14:105919007(+) A-I      intronic chr14:105910172(+) A-I      intronic chr14:105921127(+) A-I      intronic chr14:105924147(+) A-I      intronic chr14:105894132(+) A-I      intronic chr14:105910523(+) A-I      intronic chr14:105895201(+) A-I      intronic chr14:105909893(+) A-I      intronic chr14:105910106(+) A-I      intronic chr14:105921903(+) A-I      intronic chr14:105909778(+) A-I      intronic chr14:105891013(+) A-I      intronic chr14:105910318(+) A-I      intronic chr14:105909850(+) A-I      intronic chr14:105910083(+) A-I      intronic chr14:105924005(+) A-I      intronic chr14:105924107(+) A-I      intronic chr14:105897602(+) A-I      intronic chr14:105909729(+) A-I      intronic chr14:105894659(+) A-I      intronic chr14:105909802(+) A-I      intronic chr14:105924168(+) A-I      intronic chr14:105910173(+) A-I      intronic chr14:105924116(+) A-I      intronic chr14:105918267(+) A-I      intronic chr14:105910069(+) A-I      intronic chr14:105910797(+) A-I      intronic chr14:105910533(+) A-I      intronic chr14:105921432(+) A-I      intronic chr14:105900871(+) A-I      intronic chr14:105924211(+) A-I      intronic chr14:105924124(+) A-I      intronic chr14:105891018(+) A-I      intronic chr14:105895179(+) A-I      intronic chr14:105924183(+) A-I      intronic chr14:105918913(+) A-I      intronic chr14:105894745(+) A-I      intronic chr14:105919891(+) A-I      intronic chr14:105920969(+) A-I      intronic chr14:105921203(+) A-I      intronic chr14:105909848(+) A-I      intronic chr14:105919001(+) A-I      intronic chr14:105921110(+) A-I      intronic chr14:105897529(+) A-I      intronic chr14:105902486(+) A-I      intronic chr14:105918228(+) A-I      intronic chr14:105894235(+) A-I      intronic chr14:105895118(+) A-I      intronic chr14:105894234(+) A-I      intronic chr14:105909757(+) A-I      intronic chr14:105891516(+) A-I      intronic chr14:105918334(+) A-I      intronic chr14:105894757(+) A-I      intronic chr14:105922538(+) A-I      intronic chr14:105919727(+) A-I      intronic chr14:105897684(+) A-I      intronic chr14:105918870(+) A-I      intronic chr14:105919006(+) A-I      intronic chr14:105918403(+) A-I      intronic chr14:105895276(+) A-I      intronic chr14:105921360(+) A-I      intronic chr14:105924155(+) A-I      intronic chr14:105901863(+) A-I      intronic chr14:105910020(+) A-I      intronic chr14:105920131(+) A-I      intronic chr14:105921024(+) A-I      intronic chr14:105918760(+) A-I      intronic chr14:105929156(+) A-I      intronic chr14:105921307(+) A-I      intronic chr14:105894095(+) A-I      intronic chr14:105894287(+) A-I      intronic chr14:105924054(+) A-I      intronic chr14:105918874(+) A-I      intronic chr14:105921463(+) A-I      intronic chr14:105921342(+) A-I      intronic chr14:105924098(+) A-I      intronic chr14:105918855(+) A-I      intronic chr14:105901040(+) A-I      intronic chr14:105909934(+) A-I      intronic chr14:105909921(+) A-I      intronic chr14:105895282(+) A-I      intronic chr14:105920113(+) A-I      intronic chr14:105918835(+) A-I      intronic chr14:105921478(+) A-I      intronic chr14:105910302(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MTA1	chr14:105894234(+) A-I intron -    22327324 chr14:105921463(+) A-I intron -    22327324 chr14:105919006(+) A-I intron -    21960545 chr14:105909893(+) A-G intron -    22484847 chr14:105918760(+) A-G intron -    22484847 chr14:105921342(+) A-G intron -    22484847 chr14:105921355(+) A-G intron -    22484847 chr14:105921432(+) A-G intron -    22484847 chr14:105921463(+) A-G intron -    22484847 chr14:105924151(+) A-G intron -    22484847 chr14:105924155(+) A-G intron -    22484847 chr14:105924211(+) A-G intron -    22484847 chr14:105924217(+) G-A intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MTA1	chr14:105886370-105886371(+) m6A 5'UTR//CDS       24209618 chr14:105905026-105905027(+) m6A 5'UTR//CDS//exon       24209618 chr14:105905054-105905055(+) Gm 5'UTR//CDS//exon       - chr14:105911806-105911807(+) m6A 5'UTR//CDS//exon//intron       - chr14:105916628-105916629(+) m6A 3'UTR//5'UTR//CDS//exon       22575960 chr14:105924675-105924676(+) m6A 3'UTR//5'UTR//CDS//exon       - chr14:105926723-105926724(+) m6A 3'UTR//5'UTR//CDS//exon       - chr14:105926783-105926784(+) m6A 3'UTR//5'UTR//CDS//exon       22575960 chr14:105927129-105927130(+) m6A 3'UTR//5'UTR//CDS//exon       - chr14:105930823-105930824(+) m6A 5'UTR//CDS//exon       22575960 chr14:105930885-105930886(+) m6A 5'UTR//CDS//exon       22575960 chr14:105930890-105930891(+) m6A 5'UTR//CDS//exon       22575960 chr14:105930916-105930917(+) m6A exon//intron       - chr14:105931064-105931065(+) m6A 3'UTR//CDS//exon       22575960 chr14:105931689-105931690(+) m6A exon//intron       - chr14:105931699-105931700(+) m6A exon//intron       - chr14:105932764-105932765(+) m6A 3'UTR//CDS//exon       - chr14:105933054-105933055(+) m1A 3'UTR//CDS//exon//intron       26863410 chr14:105933255-105933256(+) m6A exon//intron       - chr14:105933312-105933313(+) m6A exon//intron       24284625//25456834 chr14:105933451-105933452(+) m6A exon//intron       25456834//22608085 chr14:105935456-105935457(+) m6A exon//intron       - chr14:105936179-105936180(+) m6A 3'UTR//CDS//exon       - chr14:105936190-105936191(+) m6A 3'UTR//CDS//exon       24284625 chr14:105936277-105936278(+) m6A 3'UTR//CDS//exon       24284625//24209618//22575960 chr14:105936324-105936325(+) m6A 3'UTR//CDS//exon       24284625//24209618//22575960 chr14:105936432-105936433(+) m6A 3'UTR//CDS//exon       24209618//22575960 chr14:105936547-105936548(+) m6A 3'UTR//CDS//exon       24284625//24209618//22575960 chr14:105936690-105936691(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960 chr14:105936711-105936712(+) m1A 3'UTR//exon       26863196//26863410

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MTA1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome HEK-293 cells     22199352 Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART2-3p
Interactor2: MTA1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg