Basic Information:

  VIRBase ID:  

VHID00392171

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-3p:  MIMAT0003720          GIMAP6:  NM_001244071     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART20-3p	GIMAP6
miRBase Accession/Entrez ID	MIMAT0003720	474344
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IAN-2//IAN-6//IAN2//IAN6

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GIMAP6	chr7:150324498-150324499(-) m6A 3'UTR       - chr7:150324553-150324554(-) m6A 3'UTR       27371828 chr7:150324606-150324607(-) m6A 3'UTR       28052920//27371828 chr7:150324660-150324661(-) m6A 3'UTR       28052920//27371828 chr7:150324781-150324782(-) m6A 3'UTR       28052920//27371828 chr7:150324794-150324795(-) m6A 3'UTR       28052920//27371828 chr7:150324872-150324873(-) m6A 3'UTR//CDS       28052920//27371828 chr7:150324944-150324945(-) m6A 3'UTR//CDS       28052920//27371828 chr7:150324960-150324961(-) m6A 3'UTR//CDS       28052920//27371828 chr7:150325147-150325148(-) m6A 3'UTR//CDS       27371828 chr7:150325161-150325162(-) m6A 3'UTR//CDS       27371828 chr7:150325185-150325186(-) m6A 3'UTR//CDS       27371828 chr7:150325453-150325454(-) m6A CDS//intron       28052920//27371828 chr7:150325466-150325467(-) m6A CDS//intron       28052920//27371828 chr7:150325478-150325479(-) m6A CDS//intron       28052920//27371828 chr7:150325512-150325513(-) m6A CDS//intron       28052920//27371828 chr7:150325540-150325541(-) m6A CDS//intron       28052920//27371828 chr7:150325565-150325566(-) m6A CDS//intron       28052920//27371828 chr7:150325576-150325577(-) m6A CDS//intron       27371828 chr7:150325583-150325584(-) m6A CDS//intron       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GIMAP6	Exosome Blood     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART20-3p	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART20-3p
Interactor2: GIMAP6

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//Targetscan
Support Database	RepTar//VmiReg