Basic Information:

  VIRBase ID:  

VHID00390867

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-3p:  MIMAT0003720          C8orf33:  NM_023080     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART20-3p	C8orf33
miRBase Accession/Entrez ID	MIMAT0003720	65265
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C8orf33	chr8:146277979-146277980(+) m6A CDS//exon//intron       22575960 chr8:146278174-146278175(+) m6A CDS//exon       - chr8:146278200-146278201(+) m6A CDS//exon       - chr8:146278243-146278244(+) m6A CDS//exon       24284625//24981863 chr8:146278515-146278516(+) m6A CDS//exon//intron       - chr8:146278527-146278528(+) m6A CDS//exon//intron       - chr8:146279443-146279444(+) Cm CDS//exon       - chr8:146279637-146279638(+) m6A 3'UTR//exon       22575960 chr8:146280720-146280721(+) m6A 3'UTR//exon       24981863 chr8:146280751-146280752(+) m6A 3'UTR//exon       24981863 chr8:146280774-146280775(+) m6A 3'UTR//exon       24981863 chr8:146280804-146280805(+) m6A 3'UTR//exon       22575960 chr8:146280872-146280873(+) m6A 3'UTR//exon       22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C8orf33	Exosome Blood     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART20-3p	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART20-3p
Interactor2: C8orf33

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg