Basic Information:

  VIRBase ID:  

VHID00390609

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-3p:  MIMAT0003720          TMEM167B:  NR_136242     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART20-3p	TMEM167B
miRBase Accession/Entrez ID	MIMAT0003720	56900
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AD-020//C1orf119

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM167B	chr1:109632842-109632843(+) m6A 5'UTR       22608085 chr1:109632903-109632904(+) m6A 5'UTR       22608085 chr1:109633293-109633294(+) m6A 5'UTR       24981863 chr1:109633458-109633459(+) m6A 5'UTR//exon       24981863 chr1:109633464-109633465(+) m6A 5'UTR//exon       24981863 chr1:109634295-109634296(+) m6A exon//intron       24981863 chr1:109637052-109637053(+) m6A CDS//exon       24209618 chr1:109637173-109637174(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr1:109637184-109637185(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr1:109637190-109637191(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr1:109637271-109637272(+) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr1:109637285-109637286(+) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr1:109637306-109637307(+) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr1:109637422-109637423(+) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr1:109637470-109637471(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:109637492-109637493(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:109637508-109637509(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:109637537-109637538(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr1:109637596-109637597(+) m6A 3'UTR//exon       24209618//25456834//24981863//22608085 chr1:109639451-109639452(+) Y 3'UTR       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM167B	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART20-3p	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART20-3p
Interactor2: TMEM167B

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg