Basic Information:

  VIRBase ID:  

VHID00389762

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-3p:  MIMAT0003720          MON1B:  NM_001286640     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART20-3p	MON1B
miRBase Accession/Entrez ID	MIMAT0003720	22879
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HSRG1//SAND2//SRG1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MON1B	chr16:77230546(+) A-I      intronic chr16:77230444(+) A-I      intronic chr16:77230517(+) A-I      intronic chr16:77230522(+) A-I      intronic chr16:77230526(+) A-I      intronic chr16:77234660(+) A-I      3'UTR chr16:77234488(+) A-I      3'UTR chr16:77230417(+) A-I      intronic chr16:77230418(+) A-I      intronic chr16:77234477(+) A-I      3'UTR chr16:77234532(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MON1B	chr16:77229880(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MON1B	chr16:77224919-77224920(+) m6A 5'UTR//exon//intron       24981863 chr16:77224970-77224971(+) m6A 5'UTR//exon//intron       24981863 chr16:77225151-77225152(+) m6A 5'UTR//CDS//exon//intron       24284625//24209618//24981863 chr16:77225398-77225399(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr16:77225431-77225432(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr16:77225440-77225441(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr16:77225526-77225527(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr16:77227356-77227357(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr16:77227362-77227363(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr16:77227494-77227495(+) m6A CDS//exon//intron       24284625//24209618 chr16:77227682-77227683(+) m6A exon//intron       24284625//24209618 chr16:77227705-77227706(+) m6A exon//intron       24284625//24209618 chr16:77228234-77228235(+) m6A 3'UTR//CDS//exon       24284625//24981863//22608085 chr16:77228290-77228291(+) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//22575960//22608085 chr16:77228399-77228400(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:77228444-77228445(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:77228456-77228457(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:77228471-77228472(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:77228654-77228655(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960 chr16:77229011-77229012(+) m6A CDS//exon       24284625 chr16:77229484-77229485(+) m6A CDS//exon       24284625 chr16:77229564-77229565(+) m6A CDS//exon       24284625 chr16:77232081-77232082(+) m6A CDS//exon       24284625//25456834//24981863 chr16:77232110-77232111(+) m6A CDS//exon       24284625//25456834//24981863 chr16:77232167-77232168(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942 chr16:77232198-77232199(+) m6A CDS//exon       24284625//24209618//24981863//26404942 chr16:77232221-77232222(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942 chr16:77232498-77232499(+) m6A 3'UTR//exon       24284625//24209618 chr16:77232512-77232513(+) m6A 3'UTR//exon       24284625//24209618 chr16:77232635-77232636(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr16:77232664-77232665(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr16:77232689-77232690(+) m6A 3'UTR//exon       24284625//24209618//24981863 chr16:77232816-77232817(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr16:77232823-77232824(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr16:77232916-77232917(+) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22575960//22608085 chr16:77232943-77232944(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:77232971-77232972(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:77232981-77232982(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:77233023-77233024(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr16:77233043-77233044(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:77233066-77233067(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:77233651-77233652(+) m6A 3'UTR       24284625 chr16:77233682-77233683(+) m6A 3'UTR       24284625 chr16:77233798-77233799(+) m6A 3'UTR       24284625//24981863//22608085 chr16:77233806-77233807(+) m6A 3'UTR       24284625//24981863//22608085 chr16:77233819-77233820(+) m6A 3'UTR       24284625//24981863 chr16:77233901-77233902(+) m6A 3'UTR       24284625//24981863 chr16:77234269-77234270(+) m6A 3'UTR       24981863 chr16:77234573-77234574(+) m6A 3'UTR       24981863 chr16:77234846-77234847(+) m6A 3'UTR       24284625//24981863 chr16:77234871-77234872(+) m6A 3'UTR       24284625//24981863 chr16:77234887-77234888(+) m6A 3'UTR       24284625//24981863 chr16:77234896-77234897(+) m6A 3'UTR       24284625//24981863//22608085 chr16:77234911-77234912(+) m6A 3'UTR       24284625//24981863//22608085 chr16:77234925-77234926(+) m6A 3'UTR       24284625//24981863//22608085 chr16:77234981-77234982(+) m6A 3'UTR       24284625//24981863//22608085 chr16:77234987-77234988(+) m6A 3'UTR       24284625//24981863//22608085 chr16:77235018-77235019(+) m6A 3'UTR       24981863//22608085 chr16:77235144-77235145(+) m6A 3'UTR       24981863 chr16:77235159-77235160(+) m6A 3'UTR       24981863 chr16:77235787-77235788(+) m6A 3'UTR       24981863//27773535 chr16:77235807-77235808(+) m6A 3'UTR       24981863//27773535 chr16:77236129-77236130(+) m6A 3'UTR       27773535 chr16:77236214-77236215(+) m6A 3'UTR       24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MON1B	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART20-3p	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART20-3p
Interactor2: MON1B

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg