Basic Information:

  VIRBase ID:  

VHID00389383

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-3p:  MIMAT0003720          WTAP:  NM_001270533     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART20-3p	WTAP
miRBase Accession/Entrez ID	MIMAT0003720	9589
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Mum2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	WTAP	chr6:160163855(+) A-I      intronic chr6:160163878(+) A-I      intronic chr6:160163897(+) A-I      intronic chr6:160163906(+) A-I      intronic chr6:160164259(+) A-I      intronic chr6:160156674(+) A-I      intronic chr6:160164262(+) A-I      intronic chr6:160164288(+) A-I      intronic chr6:160164331(+) A-I      intronic chr6:160155243(+) A-I      intronic chr6:160155229(+) A-I      intronic chr6:160155659(+) A-I      intronic chr6:160156194(+) A-I      intronic chr6:160156247(+) A-I      intronic chr6:160156272(+) A-I      intronic chr6:160156370(+) A-I      intronic chr6:160156382(+) A-I      intronic chr6:160156395(+) A-I      intronic chr6:160156445(+) A-I      intronic chr6:160156634(+) A-I      intronic chr6:160156666(+) A-I      intronic chr6:160162756(+) A-I      intronic chr6:160162765(+) A-I      intronic chr6:160162786(+) A-I      intronic chr6:160162898(+) A-I      intronic chr6:160163830(+) A-I      intronic chr6:160163854(+) A-I      intronic chr6:160155634(+) A-I      intronic chr6:160156310(+) A-I      intronic chr6:160163826(+) A-I      intronic chr6:160156297(+) A-I      intronic chr6:160155274(+) A-I      intronic chr6:160156356(+) A-I      intronic chr6:160156226(+) A-I      intronic chr6:160156373(+) A-I      intronic chr6:160153736(+) A-I      intronic chr6:160156660(+) A-I      intronic chr6:160155235(+) A-I      intronic chr6:160156528(+) A-I      intronic chr6:160156434(+) A-I      intronic chr6:160156288(+) A-I      intronic chr6:160156650(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	WTAP	chr6:160177240(+) A-I exon 3'UTR    19478186 chr6:160153709(+) A-I intron -    21960545 chr6:160162834(+) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	WTAP	chr6:160146917-160146918(+) m6A 5'UTR       27773535 chr6:160147156-160147157(+) m6A 5'UTR       24284625//27773535//22608085 chr6:160147182-160147183(+) m6A 5'UTR       24284625//27773535//22608085 chr6:160147188-160147189(+) m6A 5'UTR       24284625//24981863//27773535//22608085 chr6:160147273-160147274(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr6:160147400-160147401(+) m6A 5'UTR       24284625//24209618//24981863//27773535//22608085 chr6:160147481-160147482(+) m6A 5'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr6:160147499-160147500(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:160147524-160147525(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:160147571-160147572(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:160147657-160147658(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr6:160147680-160147681(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr6:160147737-160147738(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr6:160147764-160147765(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr6:160147809-160147810(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22608085 chr6:160147825-160147826(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22608085 chr6:160147877-160147878(+) m6A 5'UTR       24284625//24209618//24981863//22608085 chr6:160147993-160147994(+) m6A 5'UTR       24284625//24209618//24981863//27773536//22608085 chr6:160148566-160148567(+) m6A 5'UTR//exon//intron       27773536 chr6:160157311-160157312(+) m6A CDS//exon       24209618 chr6:160157406-160157407(+) m6A exon//intron       24209618 chr6:160163125-160163126(+) m6A CDS//exon       24981863 chr6:160164733-160164734(+) m6A CDS       24981863//27773535 chr6:160164771-160164772(+) m6A CDS       24981863//27773535 chr6:160164802-160164803(+) m6A CDS       24981863//27773535 chr6:160169289-160169290(+) m6A CDS       25456834//24981863//27773535//22608085 chr6:160169329-160169330(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr6:160169335-160169336(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr6:160169346-160169347(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr6:160169356-160169357(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr6:160169371-160169372(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:160169405-160169406(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:160169428-160169429(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:160169467-160169468(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:160169495-160169496(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:160169501-160169502(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr6:160169563-160169564(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr6:160169576-160169577(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr6:160169638-160169639(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//22608085 chr6:160169683-160169684(+) m6A 3'UTR//intron       24981863//22608085 chr6:160169691-160169692(+) m6A 3'UTR//intron       24981863//22608085 chr6:160169733-160169734(+) m6A 3'UTR//intron       24981863//22608085 chr6:160169770-160169771(+) m6A 3'UTR//intron       24981863//22608085 chr6:160169789-160169790(+) m6A 3'UTR//intron       24981863//22608085 chr6:160169816-160169817(+) m6A 3'UTR//intron       24981863//22608085 chr6:160169888-160169889(+) m6A 3'UTR//intron       24209618//24981863//27773535//22608085 chr6:160169915-160169916(+) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//22608085 chr6:160169922-160169923(+) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//22608085 chr6:160169941-160169942(+) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//22608085 chr6:160169955-160169956(+) m6A 3'UTR//intron       24209618//25456834//24981863//27773535//22608085 chr6:160170001-160170002(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr6:160170154-160170155(+) m6A 3'UTR//intron       27773535 chr6:160170176-160170177(+) m6A 3'UTR//intron       27773535 chr6:160170185-160170186(+) m6A 3'UTR//intron       27773535 chr6:160170205-160170206(+) m6A 3'UTR//intron       27773535 chr6:160170218-160170219(+) m6A 3'UTR//intron       27773535 chr6:160170237-160170238(+) m6A 3'UTR//intron       27773535 chr6:160170284-160170285(+) m6A 3'UTR//intron       27773535 chr6:160174495-160174496(+) m6A CDS       25456834//24981863//22608085 chr6:160176145-160176146(+) m6A CDS       24284625//24209618//24981863//27773535//22608085 chr6:160176211-160176212(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr6:160176225-160176226(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:160176234-160176235(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:160176257-160176258(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:160176279-160176280(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:160176412-160176413(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:160176470-160176471(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:160176491-160176492(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:160176521-160176522(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:160176574-160176575(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr6:160176608-160176609(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr6:160176885-160176886(+) m6A 3'UTR       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	WTAP	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleoplasm K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART20-3p	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART20-3p
Interactor2: WTAP

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg