Basic Information:

  VIRBase ID:  

VHID00388996

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-3p:  MIMAT0003720          STYX:  NM_001130701     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART20-3p	STYX
miRBase Accession/Entrez ID	MIMAT0003720	6815
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	STYX	chr14:53240752(+) A-I      3'UTR chr14:53240746(+) A-I      3'UTR chr14:53240731(+) A-I      3'UTR chr14:53240716(+) A-I      3'UTR chr14:53240723(+) A-I      3'UTR chr14:53200519(+) A-I      intronic chr14:53222851(+) A-I      intronic chr14:53222805(+) A-I      intronic chr14:53222807(+) A-I      intronic chr14:53222812(+) A-I      intronic chr14:53240761(+) A-I      3'UTR chr14:53222830(+) A-I      intronic chr14:53210088(+) A-I      intronic chr14:53210120(+) A-I      intronic chr14:53210184(+) A-I      intronic chr14:53210188(+) A-I      intronic chr14:53210561(+) A-I      intronic chr14:53214551(+) A-I      intronic chr14:53214630(+) A-I      intronic chr14:53218780(+) A-I      intronic chr14:53218803(+) A-I      intronic chr14:53218805(+) A-I      intronic chr14:53218866(+) A-I      intronic chr14:53218925(+) A-I      intronic chr14:53219085(+) A-I      intronic chr14:53219098(+) A-I      intronic chr14:53219869(+) A-I      intronic chr14:53222764(+) A-I      intronic chr14:53222876(+) A-I      intronic chr14:53227804(+) A-I      intronic chr14:53227939(+) A-I      intronic chr14:53228032(+) A-I      intronic chr14:53228036(+) A-I      intronic chr14:53228837(+) A-I      intronic chr14:53223657(+) A-I      intronic chr14:53199440(+) A-I      intronic chr14:53218799(+) A-I      intronic chr14:53222115(+) A-I      intronic chr14:53206383(+) A-I      intronic chr14:53228787(+) A-I      intronic chr14:53222969(+) A-I      intronic chr14:53226658(+) A-I      intronic chr14:53199390(+) A-I      intronic chr14:53206439(+) A-I      intronic chr14:53222815(+) A-I      intronic chr14:53210045(+) A-I      intronic chr14:53199589(+) A-I      intronic chr14:53199624(+) A-I      intronic chr14:53201576(+) A-I      intronic chr14:53210679(+) A-I      intronic chr14:53201625(+) A-I      intronic chr14:53201628(+) A-I      intronic chr14:53210609(+) A-I      intronic chr14:53204555(+) A-I      intronic chr14:53204564(+) A-I      intronic chr14:53204574(+) A-I      intronic chr14:53204633(+) A-I      intronic chr14:53206486(+) A-I      intronic chr14:53223019(+) A-I      intronic chr14:53206612(+) A-I      intronic chr14:53206621(+) A-I      intronic chr14:53206622(+) A-I      intronic chr14:53206800(+) A-I      intronic chr14:53206811(+) A-I      intronic chr14:53206888(+) A-I      intronic chr14:53210044(+) A-I      intronic chr14:53206454(+) A-I      intronic chr14:53226654(+) A-I      intronic chr14:53199518(+) A-I      intronic chr14:53214524(+) A-I      intronic chr14:53206564(+) A-I      intronic chr14:53222968(+) A-I      intronic chr14:53208285(+) A-I      intronic chr14:53198753(+) A-I      intronic chr14:53215080(+) A-I      intronic chr14:53222846(+) A-I      intronic chr14:53219954(+) A-I      intronic chr14:53206477(+) A-I      intronic chr14:53218695(+) A-I      intronic chr14:53204659(+) A-I      intronic chr14:53214590(+) A-I      intronic chr14:53210031(+) A-I      intronic chr14:53210669(+) A-I      intronic chr14:53219193(+) A-I      intronic chr14:53206914(+) A-I      intronic chr14:53198767(+) A-I      intronic chr14:53206552(+) A-I      intronic chr14:53204563(+) A-I      intronic chr14:53222873(+) A-I      intronic chr14:53218940(+) A-I      intronic chr14:53210178(+) A-I      intronic chr14:53219001(+) A-I      intronic chr14:53226777(+) A-I      intronic chr14:53218758(+) A-I      intronic chr14:53222910(+) A-I      intronic chr14:53231570(+) A-I      intronic chr14:53228035(+) A-I      intronic chr14:53232840(+) A-I      intronic chr14:53227966(+) A-I      intronic chr14:53218719(+) A-I      intronic chr14:53206923(+) A-I      intronic chr14:53210685(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	STYX	chr14:53240231(+) G-T intron -    21725310 chr14:53214590(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	STYX	chr14:53197036-53197037(+) m6A 5'UTR//intron       24284625 chr14:53237764-53237765(+) m6A CDS//intron       24981863//22575960 chr14:53237791-53237792(+) m6A CDS//intron       24981863 chr14:53237907-53237908(+) m6A 3'UTR//intron       24284625//24981863 chr14:53237946-53237947(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr14:53237990-53237991(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr14:53238036-53238037(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr14:53238081-53238082(+) m6A 3'UTR//intron       24284625//24981863//22608085 chr14:53238095-53238096(+) m6A 3'UTR//intron       24284625//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	STYX	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART20-3p	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART20-3p
Interactor2: STYX

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg