Detail Information

Basic Information:


  VIRBase ID:  

VHID00388744

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-3p:           PLIN1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART20-3p PLIN1
miRBase
Accession/Entrez ID		 MIMAT0003720 5346
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - FPLD4//PERI//PLIN

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PLIN1
chr15:90217665(-) A-I      intronic
chr15:90217571(-) A-I      intronic
chr15:90221300(-) A-I      intronic
chr15:90221325(-) A-I      intronic
chr15:90218290(-) A-I      intronic
chr15:90218219(-) A-I      intronic
chr15:90221293(-) A-I      intronic
chr15:90221292(-) A-I      intronic
chr15:90221361(-) A-I      intronic
chr15:90222297(-) A-I      intronic
chr15:90221988(-) A-I      intronic
chr15:90221697(-) A-I      intronic
chr15:90221678(-) A-I      intronic
chr15:90221672(-) A-I      intronic
chr15:90221665(-) A-I      intronic
chr15:90221593(-) A-I      intronic
chr15:90221578(-) A-I      intronic
chr15:90221524(-) A-I      intronic
chr15:90221396(-) A-I      intronic
chr15:90221391(-) A-I      intronic
chr15:90221150(-) A-I      intronic
chr15:90221337(-) A-I      intronic
chr15:90221327(-) A-I      intronic
chr15:90221322(-) A-I      intronic
chr15:90221319(-) A-I      intronic
chr15:90221318(-) A-I      intronic
chr15:90221303(-) A-I      intronic
chr15:90221302(-) A-I      intronic
chr15:90221301(-) A-I      intronic
chr15:90221263(-) A-I      intronic
chr15:90221262(-) A-I      intronic
chr15:90221203(-) A-I      intronic
chr15:90221632(-) A-I      intronic
chr15:90221146(-) A-I      intronic
chr15:90221079(-) A-I      intronic
chr15:90221049(-) A-I      intronic
chr15:90219698(-) A-I      intronic
chr15:90219696(-) A-I      intronic
chr15:90219683(-) A-I      intronic
chr15:90219611(-) A-I      intronic
chr15:90219576(-) A-I      intronic
chr15:90219571(-) A-I      intronic
chr15:90219568(-) A-I      intronic
chr15:90219555(-) A-I      intronic
chr15:90219546(-) A-I      intronic
chr15:90218838(-) A-I      intronic
chr15:90218830(-) A-I      intronic
chr15:90218786(-) A-I      intronic
chr15:90218781(-) A-I      intronic
chr15:90218756(-) A-I      intronic
chr15:90218594(-) A-I      intronic
chr15:90218581(-) A-I      intronic
chr15:90218333(-) A-I      intronic
chr15:90218277(-) A-I      intronic
chr15:90218247(-) A-I      intronic
chr15:90218180(-) A-I      intronic
chr15:90217747(-) A-I      intronic
chr15:90217745(-) A-I      intronic
chr15:90217652(-) A-I      intronic
chr15:90217649(-) A-I      intronic
chr15:90217644(-) A-I      intronic
chr15:90217620(-) A-I      intronic
chr15:90217580(-) A-I      intronic
chr15:90217577(-) A-I      intronic
chr15:90217499(-) A-I      intronic
chr15:90221619(-) A-I      intronic
chr15:90221484(-) A-I      intronic
chr15:90219492(-) A-I      intronic
chr15:90218128(-) A-I      intronic
chr15:90218832(-) A-I      intronic
chr15:90221119(-) A-I      intronic
chr15:90221306(-) A-I      intronic
chr15:90217585(-) A-I      intronic
chr15:90217566(-) A-I      intronic
chr15:90218225(-) A-I      intronic
chr15:90221036(-) A-I      intronic
chr15:90221658(-) A-I      intronic
chr15:90219590(-) A-I      intronic
chr15:90218238(-) A-I      intronic
chr15:90218776(-) A-I      intronic
chr15:90221198(-) A-I      intronic
chr15:90217668(-) A-I      intronic
chr15:90221496(-) A-I      intronic
chr15:90221980(-) A-I      intronic
chr15:90221629(-) A-I      intronic
chr15:90221374(-) A-I      intronic
chr15:90218816(-) A-I      intronic
chr15:90217648(-) A-I      intronic
chr15:90221536(-) A-I      intronic
chr15:90221172(-) A-I      intronic
chr15:90221735(-) A-I      intronic
chr15:90221575(-) A-I      intronic
chr15:90221397(-) A-I      intronic
chr15:90221312(-) A-I      intronic
chr15:90218285(-) A-I      intronic
chr15:90217564(-) A-I      intronic
chr15:90217690(-) A-I      intronic
chr15:90217691(-) A-I      intronic
chr15:90221388(-) A-I      intronic
chr15:90221317(-) A-I      intronic
chr15:90221689(-) A-I      intronic
chr15:90218235(-) A-I      intronic
chr15:90217626(-) A-I      intronic
chr15:90221078(-) A-I      intronic
chr15:90221978(-) A-I      intronic
chr15:90222192(-) A-I      intronic
chr15:90218287(-) A-I      intronic
chr15:90221120(-) A-I      intronic
chr15:90221549(-) A-I      intronic
chr15:90222215(-) A-I      intronic
chr15:90221214(-) A-I      intronic
chr15:90219617(-) A-I      intronic
chr15:90221497(-) A-I      intronic
chr15:90218311(-) A-I      intronic
chr15:90222298(-) A-I      intronic
chr15:90219607(-) A-I      intronic
chr15:90221739(-) A-I      intronic
chr15:90217612(-) A-I      intronic
chr15:90221193(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PLIN1
chr15:90221198(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PLIN1
chr15:90210900-90210901(-) m6A CDS       24981863//27773536
chr15:90210905-90210906(-) m6A CDS       24981863//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PLIN1
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug ebv-miR-BART20-3p
Crizotinib       11626560

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART20-3p
Interactor2: PLIN1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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