Basic Information:

  VIRBase ID:  

VHID00388719

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-3p:  MIMAT0003720          PHKA2:  NM_000292     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART20-3p	PHKA2
miRBase Accession/Entrez ID	MIMAT0003720	5256
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GSD9A//PHK//PYK//PYKL//XLG//XLG2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PHKA2	chrX:18934425(-) A-I      intronic chrX:18994231(-) A-I      intronic chrX:18931113(-) A-I      intronic chrX:18921013(-) A-I      intronic chrX:18920827(-) A-I      intronic chrX:18994262(-) A-I      intronic chrX:18994272(-) A-I      intronic chrX:18994178(-) A-I      intronic chrX:18934521(-) A-I      intronic chrX:18934549(-) A-I      intronic chrX:18935057(-) A-I      intronic chrX:18935501(-) A-I      intronic chrX:18939461(-) A-I      intronic chrX:18940148(-) A-I      intronic chrX:18940236(-) A-I      intronic chrX:18940320(-) A-I      intronic chrX:18941230(-) A-I      intronic chrX:18996749(-) A-I      intronic chrX:18996748(-) A-I      intronic chrX:18941437(-) A-I      intronic chrX:18994208(-) A-I      intronic chrX:18994198(-) A-I      intronic chrX:18941383(-) A-I      intronic chrX:18933742(-) A-I      intronic chrX:18953849(-) A-I      intronic chrX:18953927(-) A-I      intronic chrX:18933699(-) A-I      intronic chrX:18933692(-) A-I      intronic chrX:18933675(-) A-I      intronic chrX:18933654(-) A-I      intronic chrX:18931114(-) A-I      intronic chrX:18929394(-) A-I      intronic chrX:18920966(-) A-I      intronic chrX:18920951(-) A-I      intronic chrX:18953930(-) A-I      intronic chrX:18941324(-) A-I      intronic chrX:18960726(-) A-I      intronic chrX:18974435(-) A-I      intronic chrX:18975204(-) A-I      intronic chrX:18934289(-) A-I      intronic chrX:18941432(-) A-I      intronic chrX:18941391(-) A-I      intronic chrX:18941386(-) A-I      intronic chrX:18941338(-) A-I      intronic chrX:18941337(-) A-I      intronic chrX:18941265(-) A-I      intronic chrX:18941264(-) A-I      intronic chrX:18941253(-) A-I      intronic chrX:18941240(-) A-I      intronic chrX:18941236(-) A-I      intronic chrX:18940301(-) A-I      intronic chrX:18940256(-) A-I      intronic chrX:18940216(-) A-I      intronic chrX:18940215(-) A-I      intronic chrX:18939487(-) A-I      intronic chrX:18939399(-) A-I      intronic chrX:18935632(-) A-I      intronic chrX:18935515(-) A-I      intronic chrX:18935248(-) A-I      intronic chrX:18934433(-) A-I      intronic chrX:18934385(-) A-I      intronic chrX:18934367(-) A-I      intronic chrX:18934353(-) A-I      intronic chrX:18933791(-) A-I      intronic chrX:18933777(-) A-I      intronic chrX:18933763(-) A-I      intronic chrX:18994230(-) A-I      intronic chrX:18934514(-) A-I      intronic chrX:18939508(-) A-I      intronic chrX:18941396(-) A-I      intronic chrX:18933278(-) A-I      intronic chrX:18920939(-) A-I      intronic chrX:18941344(-) A-I      intronic chrX:18934409(-) A-I      intronic chrX:18933771(-) A-I      intronic chrX:18940282(-) A-I      intronic chrX:18935090(-) A-I      intronic chrX:18933385(-) A-I      intronic chrX:18920840(-) A-I      intronic chrX:18939497(-) A-I      intronic chrX:18920421(-) A-I      intronic chrX:18920346(-) A-I      intronic chrX:18933691(-) A-I      intronic chrX:18940281(-) A-I      intronic chrX:18935537(-) A-I      intronic chrX:18939475(-) A-I      intronic chrX:18940252(-) A-I      intronic chrX:18941401(-) A-I      intronic chrX:18939322(-) A-I      intronic chrX:18939384(-) A-I      intronic chrX:18933722(-) A-I      intronic chrX:18933662(-) A-I      intronic chrX:18935570(-) A-I      intronic chrX:18934424(-) A-I      intronic chrX:18935054(-) A-I      intronic chrX:18939331(-) A-I      intronic chrX:18933213(-) A-I      intronic chrX:18935268(-) A-I      intronic chrX:18994344(-) A-I      intronic chrX:18920796(-) A-I      intronic chrX:18933650(-) A-I      intronic chrX:18935196(-) A-I      intronic chrX:18939468(-) A-I      intronic chrX:18933337(-) A-I      intronic chrX:18941434(-) A-I      intronic chrX:18939425(-) A-I      intronic chrX:18920398(-) A-I      intronic chrX:18996664(-) A-I      intronic chrX:18941306(-) A-I      intronic chrX:18929364(-) A-I      intronic chrX:18941260(-) A-I      intronic chrX:18920414(-) A-I      intronic chrX:18953758(-) A-I      intronic chrX:18939438(-) A-I      intronic chrX:18960744(-) A-I      intronic chrX:18933587(-) A-I      intronic chrX:18920368(-) A-I      intronic chrX:18939481(-) A-I      intronic chrX:18931652(-) A-I      intronic chrX:18996642(-) A-I      intronic chrX:18940130(-) A-I      intronic chrX:18957520(-) A-I      intronic chrX:18960743(-) A-I      intronic chrX:18920082(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PHKA2	chrX:18941260(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PHKA2	chrX:18911125-18911126(-) m6A 3'UTR//exon       24284625//24981863 chrX:18911278-18911279(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//22608085 chrX:18911324-18911325(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//22608085 chrX:18911352-18911353(-) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//22608085 chrX:18911449-18911450(-) m6A 3'UTR//exon       24284625//25456834//24981863//22608085 chrX:18911485-18911486(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chrX:18911539-18911540(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chrX:18911587-18911588(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chrX:18911738-18911739(-) m6A CDS//exon       24284625//24981863//22608085 chrX:18911753-18911754(-) m6A CDS//exon       24284625//24981863//22608085 chrX:18912234-18912235(-) m6A exon//intron       24284625//24981863 chrX:18915581-18915582(-) m6A exon//intron       - chrX:18915590-18915591(-) m6A exon//intron       - chrX:18915603-18915604(-) m6A exon//intron       - chrX:18918790-18918791(-) m6A CDS//exon//intron       - chrX:18919605-18919606(-) m6A CDS//exon       - chrX:18919623-18919624(-) m6A CDS//exon       - chrX:18919646-18919647(-) m6A CDS//exon       - chrX:18920990-18920991(-) m6A exon//intron       - chrX:18926120-18926121(-) m6A CDS       - chrX:18926143-18926144(-) m6A CDS       - chrX:18926159-18926160(-) m6A CDS       - chrX:18926945-18926946(-) m6A CDS       - chrX:18926954-18926955(-) m6A CDS       - chrX:18926963-18926964(-) m6A CDS       - chrX:18927002-18927003(-) m6A CDS       - chrX:18943810-18943811(-) m6A CDS//exon       - chrX:18943827-18943828(-) m6A CDS//exon       - chrX:18943835-18943836(-) m6A CDS//exon       - chrX:18944629-18944630(-) m6A CDS       - chrX:18944658-18944659(-) m6A CDS       - chrX:18944671-18944672(-) m6A CDS       - chrX:18969346-18969347(-) m6A CDS       27773535 chrX:18969366-18969367(-) m6A CDS       27773535 chrX:18970614-18970615(-) m6A CDS       27773535 chrX:18972399-18972400(-) m6A CDS       27773535 chrX:18972411-18972412(-) m6A CDS       27773535 chrX:19001989-19001990(-) m6A CDS       27773536 chrX:19002127-19002128(-) m6A 5'UTR       27773536 chrX:19002132-19002133(-) m6A 5'UTR       27773536 chrX:19002159-19002160(-) m6A 5'UTR       27773536 chrX:19002218-19002219(-) m6A 5'UTR       27773536 chrX:19002298-19002299(-) m6A 5'UTR       27773536 chrX:19002357-19002358(-) m6A 5'UTR       27773536 chrX:19002421-19002422(-) m6A 5'UTR       27371828//27773536 chrX:19002621-19002622(-) m6A 5'UTR       25456834//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PHKA2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART20-3p	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART20-3p
Interactor2: PHKA2

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg