Detail Information

Basic Information:


  VIRBase ID:  

VHID00388604

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-3p:           MPV17:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART20-3p MPV17
miRBase
Accession/Entrez ID		 MIMAT0003720 4358
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - CMT2EE//MTDPS6//SYM1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MPV17
chr2:27537026(-) A-I      intronic
chr2:27533142(-) A-I      intronic
chr2:27541021(-) A-I      intronic
chr2:27537041(-) A-I      intronic
chr2:27537078(-) A-I      intronic
chr2:27542923(-) A-I      intronic
chr2:27541905(-) A-I      intronic
chr2:27541033(-) A-I      intronic
chr2:27541935(-) A-I      intronic
chr2:27536919(-) A-I      intronic
chr2:27538464(-) A-I      intronic
chr2:27537135(-) A-I      intronic
chr2:27541353(-) A-I      intronic
chr2:27541426(-) A-I      intronic
chr2:27536975(-) A-I      intronic
chr2:27541665(-) A-I      intronic
chr2:27541708(-) A-I      intronic
chr2:27541453(-) A-I      intronic
chr2:27541739(-) A-I      intronic
chr2:27541467(-) A-I      intronic
chr2:27533188(-) A-I      intronic
chr2:27533243(-) A-I      intronic
chr2:27536647(-) A-I      intronic
chr2:27536676(-) A-I      intronic
chr2:27536694(-) A-I      intronic
chr2:27536700(-) A-I      intronic
chr2:27536949(-) A-I      intronic
chr2:27541349(-) A-I      intronic
chr2:27541697(-) A-I      intronic
chr2:27542935(-) A-I      intronic
chr2:27542883(-) A-I      intronic
chr2:27542879(-) A-I      intronic
chr2:27542791(-) A-I      intronic
chr2:27542940(-) A-I      intronic
chr2:27542786(-) A-I      intronic
chr2:27538553(-) A-I      intronic
chr2:27542960(-) A-I      intronic
chr2:27542982(-) A-I      intronic
chr2:27542741(-) A-I      intronic
chr2:27542681(-) A-I      intronic
chr2:27542668(-) A-I      intronic
chr2:27543231(-) A-I      intronic
chr2:27543242(-) A-I      intronic
chr2:27543289(-) A-I      intronic
chr2:27542635(-) A-I      intronic
chr2:27543480(-) A-I      intronic
chr2:27543468(-) A-I      intronic
chr2:27543451(-) A-I      intronic
chr2:27543443(-) A-I      intronic
chr2:27543438(-) A-I      intronic
chr2:27543416(-) A-I      intronic
chr2:27543415(-) A-I      intronic
chr2:27543397(-) A-I      intronic
chr2:27543396(-) A-I      intronic
chr2:27541788(-) A-I      intronic
chr2:27543385(-) A-I      intronic
chr2:27542624(-) A-I      intronic
chr2:27542570(-) A-I      intronic
chr2:27542246(-) A-I      intronic
chr2:27542195(-) A-I      intronic
chr2:27543382(-) A-I      intronic
chr2:27543381(-) A-I      intronic
chr2:27543360(-) A-I      intronic
chr2:27543300(-) A-I      intronic
chr2:27541904(-) A-I      intronic
chr2:27543306(-) A-I      intronic
chr2:27541814(-) A-I      intronic
chr2:27541796(-) A-I      intronic
chr2:27541471(-) A-I      intronic
chr2:27541640(-) A-I      intronic
chr2:27541643(-) A-I      intronic
chr2:27538589(-) A-I      3'UTR
chr2:27538647(-) A-I      3'UTR
chr2:27538617(-) A-I      3'UTR
chr2:27538611(-) A-I      3'UTR
chr2:27538675(-) A-I      3'UTR
chr2:27538622(-) A-I      3'UTR
chr2:27536988(-) A-I      intronic
chr2:27541729(-) A-I      intronic
chr2:27537102(-) A-I      intronic
chr2:27536711(-) A-I      intronic
chr2:27536834(-) A-I      intronic
chr2:27537053(-) A-I      intronic
chr2:27537115(-) A-I      intronic
chr2:27536837(-) A-I      intronic
chr2:27542707(-) A-I      intronic
chr2:27536797(-) A-I      intronic
chr2:27542629(-) A-I      intronic
chr2:27537069(-) A-I      intronic
chr2:27542746(-) A-I      intronic
chr2:27542787(-) A-I      intronic
chr2:27543341(-) A-I      intronic
chr2:27543430(-) A-I      intronic
chr2:27541452(-) A-I      intronic
chr2:27541826(-) A-I      intronic
chr2:27542861(-) A-I      intronic
chr2:27536868(-) A-I      intronic
chr2:27536707(-) A-I      intronic
chr2:27536735(-) A-I      intronic
chr2:27536675(-) A-I      intronic
chr2:27536987(-) A-I      intronic
chr2:27536971(-) A-I      intronic
chr2:27538566(-) A-I      intronic
chr2:27542730(-) A-I      intronic
chr2:27536970(-) A-I      intronic
chr2:27536780(-) A-I      intronic
chr2:27537111(-) A-I      intronic
chr2:27538540(-) A-I      intronic
chr2:27536989(-) A-I      intronic
chr2:27541654(-) A-I      intronic
chr2:27536851(-) A-I      intronic
chr2:27538696(-) A-I      3'UTR
chr2:27538630(-) A-I      3'UTR
chr2:27538701(-) A-I      3'UTR
chr2:27538704(-) A-I      3'UTR
chr2:27538695(-) A-I      3'UTR
chr2:27542992(-) A-I      intronic
chr2:27542920(-) A-I      intronic
chr2:27536846(-) A-I      intronic
chr2:27536957(-) A-I      intronic
chr2:27543332(-) A-I      intronic
chr2:27542609(-) A-I      intronic
chr2:27537184(-) A-I      intronic
chr2:27536852(-) A-I      intronic
chr2:27541362(-) A-I      intronic
chr2:27536798(-) A-I      intronic
chr2:27536816(-) A-I      intronic
chr2:27543473(-) A-I      intronic
chr2:27541769(-) A-I      intronic
chr2:27536935(-) A-I      intronic
chr2:27542706(-) A-I      intronic
chr2:27542544(-) A-I      intronic
chr2:27542846(-) A-I      intronic
chr2:27537097(-) A-I      intronic
chr2:27538567(-) A-I      intronic
chr2:27536717(-) A-I      intronic
chr2:27543022(-) A-I      intronic
chr2:27542575(-) A-I      intronic
chr2:27542693(-) A-I      intronic
chr2:27543041(-) A-I      intronic
chr2:27543368(-) A-I      intronic
chr2:27542736(-) A-I      intronic
chr2:27537007(-) A-I      intronic
chr2:27542626(-) A-I      intronic
chr2:27542222(-) A-I      intronic
chr2:27541689(-) A-I      intronic
chr2:27537000(-) A-I      intronic
chr2:27542937(-) A-I      intronic
chr2:27542710(-) A-I      intronic
chr2:27542779(-) A-I      intronic
chr2:27542671(-) A-I      intronic
chr2:27541135(-) A-I      intronic
chr2:27537114(-) A-I      intronic
chr2:27536739(-) A-I      intronic
chr2:27541764(-) A-I      intronic
chr2:27542703(-) A-I      intronic
chr2:27536690(-) A-I      intronic
chr2:27536974(-) A-I      intronic
chr2:27537075(-) A-I      intronic
chr2:27537023(-) A-I      intronic
chr2:27542653(-) A-I      intronic
chr2:27542574(-) A-I      intronic
chr2:27537085(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED MPV17
chr2:27536717(-) A-I intron -    22028664   //22327324
chr2:27536739(-) A-I intron -    22028664   //22327324
chr2:27536798(-) A-I intron -    22028664   //22327324
chr2:27536834(-) A-I intron -    22028664   //22327324
chr2:27536852(-) A-I intron -    22028664   //22327324
chr2:27536957(-) A-I intron -    22028664   //22327324
chr2:27537007(-) A-I intron -    22028664   //22327324
chr2:27537023(-) A-I intron -    22028664   //21960545   //22327324
chr2:27537075(-) A-I intron -    22028664   //22327324
chr2:27537184(-) A-I intron -    22028664   //22327324
chr2:27542541(-) A-I intron -    22327324
chr2:27542544(-) A-I intron -    22327324
chr2:27542693(-) A-I intron -    22327324
chr2:27542730(-) A-I intron -    22327324
chr2:27536675(-) A-I intron -    22028664
chr2:27536690(-) A-I intron -    22028664
chr2:27536707(-) A-I intron -    22028664
chr2:27536711(-) A-I intron -    22028664
chr2:27536735(-) A-I intron -    22028664
chr2:27536780(-) A-I intron -    22028664
chr2:27536797(-) A-I intron -    22028664
chr2:27536816(-) A-I intron -    22028664
chr2:27536837(-) A-I intron -    22028664
chr2:27536846(-) A-I intron -    22028664
chr2:27536868(-) A-I intron -    22028664
chr2:27536935(-) A-I intron -    22028664
chr2:27536970(-) A-I intron -    22028664
chr2:27536971(-) A-I intron -    22028664
chr2:27536974(-) A-I intron -    22028664
chr2:27536987(-) A-I intron -    22028664
chr2:27536988(-) A-I intron -    22028664
chr2:27536989(-) A-I intron -    22028664
chr2:27537000(-) A-I intron -    22028664
chr2:27537053(-) A-I intron -    22028664
chr2:27537069(-) A-I intron -    22028664
chr2:27537085(-) A-I intron -    22028664
chr2:27537097(-) A-I intron -    22028664
chr2:27537102(-) A-I intron -    22028664
chr2:27537111(-) A-I intron -    22028664
chr2:27537113(-) A-I intron -    22028664
chr2:27537114(-) A-I intron -    22028664
chr2:27537115(-) A-I intron -    22028664
chr2:27537151(-) A-I intron -    22028664   //21960545
chr2:27538701(-) A-I intron -    21960545

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MPV17
chr2:27532409-27532410(-) m6A 3'UTR//exon       24284625//24981863//28052920//27773535//22608085
chr2:27532418-27532419(-) m6A 3'UTR//exon       24284625//24981863//28052920//27773535//22608085
chr2:27532473-27532474(-) m6A 3'UTR//exon       24284625//24981863//28052920//27773535//22608085
chr2:27532540-27532541(-) m6A 3'UTR//exon       24284625//24981863//28052920//27773535//22608085
chr2:27532653-27532654(-) m6A 3'UTR//exon       24284625//24981863//28052920//27773535//22608085
chr2:27532718-27532719(-) m6A 3'UTR//exon       24284625
chr2:27535200-27535201(-) m6A exon//intron       27773535
chr2:27535895-27535896(-) m6A CDS//exon//intron       27371828
chr2:27535911-27535912(-) m6A CDS//exon//intron       27371828
chr2:27538621-27538622(-) m6A 3'UTR//intron       24981863//27371828
chr2:27538644-27538645(-) m6A 3'UTR//intron       27371828
chr2:27545275-27545276(-) m6A exon//intron       24284625//24981863
chr2:27545285-27545286(-) m6A exon//intron       24284625//24981863
chr2:27545296-27545297(-) m6A exon//intron       24284625//24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MPV17
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -
Ribosome Colon cancer cells     24393600

Related Drug Information:


Resource Symbol Drug Name PubChem ID
RNAactDrug ebv-miR-BART20-3p
Crizotinib       11626560

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART20-3p
Interactor2: MPV17

Evidence Support:


Prediction-Evidence miRanda//Rep//Targetscan
Support Database RepTar//VmiReg

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