Basic Information:

  VIRBase ID:  

VHID00388084

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-3p:  MIMAT0003720          CARS1:  NR_036542     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART20-3p	CARS1
miRBase Accession/Entrez ID	MIMAT0003720	833
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CARS//CYSRS//MCDDBH//MDBH//MGC:11246

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CARS1	chr11:3066627(-) A-I      intronic chr11:3027454(-) A-I      intronic chr11:3066669(-) A-I      intronic chr11:3063717(-) A-I      intronic chr11:3063690(-) A-I      intronic chr11:3066672(-) A-I      intronic chr11:3066766(-) A-I      intronic chr11:3027471(-) A-I      intronic chr11:3068248(-) A-I      intronic chr11:3040756(-) A-I      intronic chr11:3027035(-) A-I      intronic chr11:3066745(-) A-I      intronic chr11:3034320(-) A-I      intronic chr11:3066648(-) A-I      intronic chr11:3066723(-) A-I      intronic chr11:3027050(-) A-I      intronic chr11:3037965(-) A-I      intronic chr11:3035037(-) A-I      intronic chr11:3034971(-) A-I      intronic chr11:3034964(-) A-I      intronic chr11:3034589(-) A-I      intronic chr11:3034586(-) A-I      intronic chr11:3034585(-) A-I      intronic chr11:3034576(-) A-I      intronic chr11:3034494(-) A-I      intronic chr11:3034121(-) A-I      intronic chr11:3027613(-) A-I      intronic chr11:3027594(-) A-I      intronic chr11:3027459(-) A-I      intronic chr11:3026948(-) A-I      intronic chr11:3034882(-) A-I      intronic chr11:3027069(-) A-I      intronic chr11:3027479(-) A-I      intronic chr11:3034961(-) A-I      intronic chr11:3026939(-) A-I      intronic chr11:3027458(-) A-I      intronic chr11:3035001(-) A-I      intronic chr11:3065884(-) A-I      intronic chr11:3026947(-) A-I      intronic chr11:3027013(-) A-I      intronic chr11:3027513(-) A-I      intronic chr11:3027593(-) A-I      intronic chr11:3066530(-) A-I      intronic chr11:3027640(-) A-I      intronic chr11:3066659(-) A-I      intronic chr11:3035042(-) A-I      intronic chr11:3034257(-) A-I      intronic chr11:3066699(-) A-I      intronic chr11:3035000(-) A-I      intronic chr11:3027055(-) A-I      intronic chr11:3027021(-) A-I      intronic chr11:3027484(-) A-I      intronic chr11:3034914(-) A-I      intronic chr11:3026946(-) A-I      intronic chr11:3034681(-) A-I      intronic chr11:3027510(-) A-I      intronic chr11:3065775(-) A-I      intronic chr11:3040822(-) A-I      intronic chr11:3034248(-) A-I      intronic chr11:3045877(-) A-I      intronic chr11:3038761(-) A-I      intronic chr11:3027638(-) A-I      intronic chr11:3034520(-) A-I      intronic chr11:3034369(-) A-I      intronic chr11:3034654(-) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CARS1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	ebv-miR-BART20-3p	Crizotinib       11626560

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART20-3p
Interactor2: CARS1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg