Basic Information:

  VIRBase ID:  

VHID00387423

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-5p:  MIMAT0003719          RETREG3:  NR_026697     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART20-5p	RETREG3
miRBase Accession/Entrez ID	MIMAT0003719	162427
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FAM134C

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RETREG3	chr17:40740848(-) A-I      intronic chr17:40749046(-) A-I      intronic chr17:40749108(-) A-I      intronic chr17:40740852(-) A-I      intronic chr17:40740851(-) A-I      intronic chr17:40740850(-) A-I      intronic chr17:40740813(-) A-I      intronic chr17:40740840(-) A-I      intronic chr17:40740879(-) A-I      intronic chr17:40740888(-) A-I      intronic chr17:40740870(-) A-I      intronic chr17:40742566(-) A-I      intronic chr17:40742595(-) A-I      intronic chr17:40742857(-) A-I      intronic chr17:40740876(-) A-I      intronic chr17:40747112(-) A-I      intronic chr17:40749029(-) A-I      intronic chr17:40742621(-) A-I      intronic chr17:40740836(-) A-I      intronic chr17:40740857(-) A-I      intronic chr17:40740824(-) A-I      intronic chr17:40740816(-) A-I      intronic chr17:40740894(-) A-I      intronic chr17:40742604(-) A-I      intronic chr17:40745477(-) A-I      intronic chr17:40748195(-) A-I      intronic chr17:40748294(-) A-I      intronic chr17:40748333(-) A-I      intronic chr17:40748976(-) A-I      intronic chr17:40748988(-) A-I      intronic chr17:40749095(-) A-I      intronic chr17:40755802(-) A-I      intronic chr17:40758976(-) A-I      intronic chr17:40758963(-) A-I      intronic chr17:40756496(-) A-I      intronic chr17:40755959(-) A-I      intronic chr17:40755806(-) A-I      intronic chr17:40754790(-) A-I      intronic chr17:40740457(-) A-I      intronic chr17:40740420(-) A-I      intronic chr17:40740375(-) A-I      intronic chr17:40736758(-) A-I      intronic chr17:40736623(-) A-I      intronic chr17:40749105(-) A-I      intronic chr17:40749275(-) A-I      intronic chr17:40749292(-) A-I      intronic chr17:40745478(-) A-I      intronic chr17:40749345(-) A-I      intronic chr17:40745568(-) A-I      intronic chr17:40746026(-) A-I      intronic chr17:40746329(-) A-I      intronic chr17:40746344(-) A-I      intronic chr17:40746363(-) A-I      intronic chr17:40746520(-) A-I      intronic chr17:40746692(-) A-I      intronic chr17:40743651(-) A-I      intronic chr17:40749384(-) A-I      intronic chr17:40749371(-) A-I      intronic chr17:40749361(-) A-I      intronic chr17:40746750(-) A-I      intronic chr17:40740458(-) A-I      intronic chr17:40740558(-) A-I      intronic chr17:40740559(-) A-I      intronic chr17:40740743(-) A-I      intronic chr17:40740868(-) A-I      intronic chr17:40741486(-) A-I      intronic chr17:40741703(-) A-I      intronic chr17:40741949(-) A-I      intronic chr17:40742265(-) A-I      intronic chr17:40742326(-) A-I      intronic chr17:40742327(-) A-I      intronic chr17:40742345(-) A-I      intronic chr17:40743644(-) A-I      intronic chr17:40743527(-) A-I      intronic chr17:40754734(-) A-I      intronic chr17:40754291(-) A-I      intronic chr17:40743523(-) A-I      intronic chr17:40743505(-) A-I      intronic chr17:40742876(-) A-I      intronic chr17:40754226(-) A-I      intronic chr17:40754076(-) A-I      intronic chr17:40753898(-) A-I      intronic chr17:40753871(-) A-I      intronic chr17:40753855(-) A-I      intronic chr17:40741974(-) A-I      intronic chr17:40742802(-) A-I      intronic chr17:40753828(-) A-I      intronic chr17:40742793(-) A-I      intronic chr17:40742768(-) A-I      intronic chr17:40742578(-) A-I      intronic chr17:40742442(-) A-I      intronic chr17:40742377(-) A-I      intronic chr17:40746817(-) A-I      intronic chr17:40746823(-) A-I      intronic chr17:40746982(-) A-I      intronic chr17:40747160(-) A-I      intronic chr17:40747164(-) A-I      intronic chr17:40747190(-) A-I      intronic chr17:40753784(-) A-I      intronic chr17:40753708(-) A-I      intronic chr17:40753479(-) A-I      intronic chr17:40753346(-) A-I      intronic chr17:40753251(-) A-I      intronic chr17:40753132(-) A-I      intronic chr17:40753059(-) A-I      intronic chr17:40752973(-) A-I      intronic chr17:40752964(-) A-I      intronic chr17:40752373(-) A-I      intronic chr17:40751638(-) A-I      intronic chr17:40751590(-) A-I      intronic chr17:40751560(-) A-I      intronic chr17:40751550(-) A-I      intronic chr17:40751416(-) A-I      intronic chr17:40750280(-) A-I      intronic chr17:40750249(-) A-I      intronic chr17:40750164(-) A-I      intronic chr17:40750132(-) A-I      intronic chr17:40749792(-) A-I      intronic chr17:40749477(-) A-I      intronic chr17:40747257(-) A-I      intronic chr17:40747343(-) A-I      intronic chr17:40733212(-) A-I      3'UTR chr17:40733310(-) A-I      3'UTR chr17:40733215(-) A-I      3'UTR chr17:40733218(-) A-I      3'UTR chr17:40746747(-) A-I      intronic chr17:40742873(-) A-I      intronic chr17:40754213(-) A-I      intronic chr17:40749059(-) A-I      intronic chr17:40747344(-) A-I      intronic chr17:40741069(-) A-I      intronic chr17:40754755(-) A-I      intronic chr17:40751589(-) A-I      intronic chr17:40753846(-) A-I      intronic chr17:40754788(-) A-I      intronic chr17:40749700(-) A-I      intronic chr17:40742682(-) A-I      intronic chr17:40740582(-) A-I      intronic chr17:40740392(-) A-I      intronic chr17:40747871(-) A-I      intronic chr17:40745974(-) A-I      intronic chr17:40736610(-) A-I      intronic chr17:40754203(-) A-I      intronic chr17:40749389(-) A-I      intronic chr17:40735839(-) A-I      intronic chr17:40746536(-) A-I      intronic chr17:40749787(-) A-I      intronic chr17:40740402(-) A-I      intronic chr17:40753789(-) A-I      intronic chr17:40746569(-) A-I      intronic chr17:40740843(-) A-I      intronic chr17:40754108(-) A-I      intronic chr17:40740935(-) A-I      intronic chr17:40741026(-) A-I      intronic chr17:40752208(-) A-I      intronic chr17:40749054(-) A-I      intronic chr17:40744922(-) A-I      intronic chr17:40749751(-) A-I      intronic chr17:40746402(-) A-I      intronic chr17:40750209(-) A-I      intronic chr17:40742533(-) A-I      intronic chr17:40741572(-) A-I      intronic chr17:40740844(-) A-I      intronic chr17:40747575(-) A-I      intronic chr17:40746831(-) A-I      intronic chr17:40751438(-) A-I      intronic chr17:40741624(-) A-I      intronic chr17:40754768(-) A-I      intronic chr17:40753334(-) A-I      intronic chr17:40741645(-) A-I      intronic chr17:40741007(-) A-I      intronic chr17:40740342(-) A-I      intronic chr17:40740955(-) A-I      intronic chr17:40742977(-) A-I      intronic chr17:40741702(-) A-I      intronic chr17:40748959(-) A-I      intronic chr17:40751509(-) A-I      intronic chr17:40740437(-) A-I      intronic chr17:40754716(-) A-I      intronic chr17:40757933(-) A-I      intronic chr17:40742306(-) A-I      intronic chr17:40746672(-) A-I      intronic chr17:40757940(-) A-I      intronic chr17:40742568(-) A-I      intronic chr17:40753212(-) A-I      intronic chr17:40740312(-) A-I      intronic chr17:40741029(-) A-I      intronic chr17:40741724(-) A-I      intronic chr17:40754141(-) A-I      intronic chr17:40747467(-) A-I      intronic chr17:40742863(-) A-I      intronic chr17:40747393(-) A-I      intronic chr17:40748122(-) A-I      intronic chr17:40754116(-) A-I      intronic chr17:40749745(-) A-I      intronic chr17:40754168(-) A-I      intronic chr17:40741503(-) A-I      intronic chr17:40741698(-) A-I      intronic chr17:40747333(-) A-I      intronic chr17:40754730(-) A-I      intronic chr17:40749035(-) A-I      intronic chr17:40754780(-) A-I      intronic chr17:40740652(-) A-I      intronic chr17:40749100(-) A-I      intronic chr17:40748215(-) A-I      intronic chr17:40742245(-) A-I      intronic chr17:40736063(-) A-I      intronic chr17:40751555(-) A-I      intronic chr17:40747552(-) A-I      intronic chr17:40754739(-) A-I      intronic chr17:40746460(-) A-I      intronic chr17:40754875(-) A-I      intronic chr17:40749069(-) A-I      intronic chr17:40736704(-) A-I      intronic chr17:40753884(-) A-I      intronic chr17:40742603(-) A-I      intronic chr17:40746043(-) A-I      intronic chr17:40754791(-) A-I      intronic chr17:40740490(-) A-I      intronic chr17:40754715(-) A-I      intronic chr17:40758955(-) A-I      intronic chr17:40740874(-) A-I      intronic chr17:40753919(-) A-I      intronic chr17:40749086(-) A-I      intronic chr17:40754703(-) A-I      intronic chr17:40740657(-) A-I      intronic chr17:40742922(-) A-I      intronic chr17:40754171(-) A-I      intronic chr17:40754259(-) A-I      intronic chr17:40753426(-) A-I      intronic chr17:40741579(-) A-I      intronic chr17:40758823(-) A-I      intronic chr17:40740871(-) A-I      intronic chr17:40749274(-) A-I      intronic chr17:40741741(-) A-I      intronic chr17:40740526(-) A-I      intronic chr17:40740948(-) A-I      intronic chr17:40753076(-) A-I      intronic chr17:40746122(-) A-I      intronic chr17:40753183(-) A-I      intronic chr17:40741558(-) A-I      intronic chr17:40742098(-) A-I      intronic chr17:40743533(-) A-I      intronic chr17:40751507(-) A-I      intronic chr17:40754787(-) A-I      intronic chr17:40742050(-) A-I      intronic chr17:40749773(-) A-I      intronic chr17:40746828(-) A-I      intronic chr17:40742353(-) A-I      intronic chr17:40742001(-) A-I      intronic chr17:40754117(-) A-I      intronic chr17:40742100(-) A-I      intronic chr17:40753925(-) A-I      intronic chr17:40754112(-) A-I      intronic chr17:40740804(-) A-I      intronic chr17:40742909(-) A-I      intronic chr17:40754321(-) A-I      intronic chr17:40748987(-) A-I      intronic chr17:40753928(-) A-I      intronic chr17:40749067(-) A-I      intronic chr17:40750272(-) A-I      intronic chr17:40741493(-) A-I      intronic chr17:40742208(-) A-I      intronic chr17:40742337(-) A-I      intronic chr17:40748268(-) A-I      intronic chr17:40749921(-) A-I      intronic chr17:40741583(-) A-I      intronic chr17:40752276(-) A-I      intronic chr17:40753401(-) A-I      intronic chr17:40752315(-) A-I      intronic chr17:40743431(-) A-I      intronic chr17:40750271(-) A-I      intronic chr17:40742828(-) A-I      intronic chr17:40756507(-) A-I      intronic chr17:40747052(-) A-I      intronic chr17:40747543(-) A-I      intronic chr17:40736682(-) A-I      intronic chr17:40740388(-) A-I      intronic chr17:40753885(-) A-I      intronic chr17:40756619(-) A-I      intronic chr17:40747053(-) A-I      intronic chr17:40754090(-) A-I      intronic chr17:40740527(-) A-I      intronic chr17:40754756(-) A-I      intronic chr17:40740940(-) A-I      intronic chr17:40753248(-) A-I      intronic chr17:40753816(-) A-I      intronic chr17:40749068(-) A-I      intronic chr17:40752394(-) A-I      intronic chr17:40753243(-) A-I      intronic chr17:40742479(-) A-I      intronic chr17:40749070(-) A-I      intronic chr17:40733888(-) A-I      Syn:Glu->Glu chr17:40753397(-) A-I      intronic chr17:40748925(-) A-I      intronic chr17:40753718(-) A-I      intronic chr17:40748202(-) A-I      intronic chr17:40741042(-) A-I      intronic chr17:40748958(-) A-I      intronic chr17:40756588(-) A-I      intronic chr17:40742110(-) A-I      intronic chr17:40740592(-) A-I      intronic chr17:40736671(-) A-I      intronic chr17:40743538(-) A-I      intronic chr17:40746126(-) A-I      intronic chr17:40747122(-) A-I      intronic chr17:40742433(-) A-I      intronic chr17:40740428(-) A-I      intronic chr17:40746721(-) A-I      intronic chr17:40756566(-) A-I      intronic chr17:40747763(-) A-I      intronic chr17:40741621(-) A-I      intronic chr17:40754249(-) A-I      intronic chr17:40740985(-) A-I      intronic chr17:40753173(-) A-I      intronic chr17:40754803(-) A-I      intronic chr17:40743455(-) A-I      intronic chr17:40751443(-) A-I      intronic chr17:40742546(-) A-I      intronic chr17:40741068(-) A-I      intronic chr17:40741565(-) A-I      intronic chr17:40754089(-) A-I      intronic chr17:40742590(-) A-I      intronic chr17:40746186(-) A-I      intronic chr17:40748956(-) A-I      intronic chr17:40756437(-) A-I      intronic chr17:40742277(-) A-I      intronic chr17:40742971(-) A-I      intronic chr17:40754223(-) A-I      intronic chr17:40742468(-) A-I      intronic chr17:40758841(-) A-I      intronic chr17:40742728(-) A-I      intronic chr17:40749374(-) A-I      intronic chr17:40749920(-) A-I      intronic chr17:40747559(-) A-I      intronic chr17:40740605(-) A-I      intronic chr17:40751485(-) A-I      intronic chr17:40746138(-) A-I      intronic chr17:40752197(-) A-I      intronic chr17:40743515(-) A-I      intronic chr17:40741619(-) A-I      intronic chr17:40740553(-) A-I      intronic chr17:40747274(-) A-I      intronic chr17:40749007(-) A-I      intronic chr17:40748372(-) A-I      intronic chr17:40753894(-) A-I      intronic chr17:40743535(-) A-I      intronic chr17:40746199(-) A-I      intronic chr17:40741708(-) A-I      intronic chr17:40742780(-) A-I      intronic chr17:40754283(-) A-I      intronic chr17:40753356(-) A-I      intronic chr17:40749183(-) A-I      intronic chr17:40749019(-) A-I      intronic chr17:40743551(-) A-I      intronic chr17:40742446(-) A-I      intronic chr17:40741675(-) A-I      intronic chr17:40751510(-) A-I      intronic chr17:40749028(-) A-I      intronic chr17:40748983(-) A-I      intronic chr17:40741120(-) A-I      intronic chr17:40756505(-) A-I      intronic chr17:40747361(-) A-I      intronic chr17:40750228(-) A-I      intronic chr17:40753049(-) A-I      intronic chr17:40753790(-) A-I      intronic chr17:40751544(-) A-I      intronic chr17:40749818(-) A-I      intronic chr17:40754850(-) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RETREG3	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol HCC cell line (HepG2)|K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART20-5p
Interactor2: RETREG3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg