Detail Information

Basic Information:


  VIRBase ID:  

VHID00387091

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-5p:           TRIM9:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART20-5p TRIM9
miRBase
Accession/Entrez ID		 MIMAT0003719 114088
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - RNF91//SPRING

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TRIM9
chr14:51454723(-) A-I      intronic
chr14:51454725(-) A-I      intronic
chr14:51454714(-) A-I      intronic
chr14:51482760(-) A-I      intronic
chr14:51454738(-) A-I      intronic
chr14:51483362(-) A-I      intronic
chr14:51483378(-) A-I      intronic
chr14:51482771(-) A-I      intronic
chr14:51483380(-) A-I      intronic
chr14:51454686(-) A-I      intronic
chr14:51454687(-) A-I      intronic
chr14:51460100(-) A-I      intronic
chr14:51459182(-) A-I      intronic
chr14:51460254(-) A-I      intronic
chr14:51456896(-) A-I      intronic
chr14:51459124(-) A-I      intronic
chr14:51456851(-) A-I      intronic
chr14:51461748(-) A-I      intronic
chr14:51456769(-) A-I      intronic
chr14:51460147(-) A-I      intronic
chr14:51461837(-) A-I      intronic
chr14:51461842(-) A-I      intronic
chr14:51459276(-) A-I      intronic
chr14:51456792(-) A-I      intronic
chr14:51461081(-) A-I      intronic
chr14:51460189(-) A-I      intronic
chr14:51456768(-) A-I      intronic
chr14:51497790(-) A-I      intronic
chr14:51521452(-) A-I      intronic
chr14:51460876(-) A-I      intronic
chr14:51456868(-) A-I      intronic
chr14:51459282(-) A-I      intronic
chr14:51461118(-) A-I      intronic
chr14:51515590(-) A-I      intronic
chr14:51459258(-) A-I      intronic
chr14:51459209(-) A-I      intronic
chr14:51461826(-) A-I      intronic
chr14:51520920(-) A-I      intronic
chr14:51520918(-) A-I      intronic
chr14:51461043(-) A-I      intronic
chr14:51519844(-) A-I      intronic
chr14:51457001(-) A-I      intronic
chr14:51515521(-) A-I      intronic
chr14:51506550(-) A-I      intronic
chr14:51506548(-) A-I      intronic
chr14:51456860(-) A-I      intronic
chr14:51456828(-) A-I      intronic
chr14:51461865(-) A-I      intronic
chr14:51461773(-) A-I      intronic
chr14:51461771(-) A-I      intronic
chr14:51461813(-) A-I      intronic
chr14:51460997(-) A-I      intronic
chr14:51460976(-) A-I      intronic
chr14:51461843(-) A-I      intronic
chr14:51459113(-) A-I      intronic
chr14:51454549(-) A-I      intronic
chr14:51460268(-) A-I      intronic
chr14:51461119(-) A-I      intronic
chr14:51460198(-) A-I      intronic
chr14:51460313(-) A-I      intronic
chr14:51461856(-) A-I      intronic
chr14:51460318(-) A-I      intronic
chr14:51459178(-) A-I      intronic
chr14:51460215(-) A-I      intronic
chr14:51459284(-) A-I      intronic
chr14:51460183(-) A-I      intronic
chr14:51459130(-) A-I      intronic
chr14:51500431(-) A-I      intronic
chr14:51483423(-) A-I      intronic
chr14:51461794(-) A-I      intronic
chr14:51460919(-) A-I      intronic
chr14:51527959(-) A-I      intronic
chr14:51460932(-) A-I      intronic
chr14:51461003(-) A-I      intronic
chr14:51518598(-) A-I      intronic
chr14:51460969(-) A-I      intronic
chr14:51482782(-) A-I      intronic
chr14:51557480(-) A-I      intronic
chr14:51483384(-) A-I      intronic
chr14:51460172(-) A-I      intronic
chr14:51461818(-) A-I      intronic
chr14:51460958(-) A-I      intronic
chr14:51521327(-) A-I      intronic
chr14:51458537(-) A-I      intronic
chr14:51456864(-) A-I      intronic
chr14:51459074(-) A-I      intronic
chr14:51461797(-) A-I      intronic
chr14:51482825(-) A-I      intronic
chr14:51456819(-) A-I      intronic
chr14:51459222(-) A-I      intronic
chr14:51461247(-) A-I      intronic
chr14:51459026(-) A-I      intronic
chr14:51456968(-) A-I      intronic
chr14:51456939(-) A-I      intronic
chr14:51515987(-) A-I      intronic
chr14:51461787(-) A-I      intronic
chr14:51515988(-) A-I      intronic
chr14:51460968(-) A-I      intronic
chr14:51459179(-) A-I      intronic
chr14:51459078(-) A-I      intronic
chr14:51460921(-) A-I      intronic
chr14:51461009(-) A-I      intronic
chr14:51456916(-) A-I      intronic
chr14:51459093(-) A-I      intronic
chr14:51482815(-) A-I      intronic
chr14:51482820(-) A-I      intronic
chr14:51457023(-) A-I      intronic
chr14:51456934(-) A-I      intronic
chr14:51461042(-) A-I      intronic
chr14:51460977(-) A-I      intronic
chr14:51460920(-) A-I      intronic
chr14:51515918(-) A-I      intronic
chr14:51456949(-) A-I      intronic
chr14:51456847(-) A-I      intronic
chr14:51454657(-) A-I      intronic
chr14:51461258(-) A-I      intronic
chr14:51459208(-) A-I      intronic
chr14:51456874(-) A-I      intronic
chr14:51537197(-) A-I      intronic
chr14:51454683(-) A-I      intronic
chr14:51461123(-) A-I      intronic
chr14:51459092(-) A-I      intronic
chr14:51457007(-) A-I      intronic
chr14:51459104(-) A-I      intronic
chr14:51460289(-) A-I      intronic
chr14:51460299(-) A-I      intronic
chr14:51460312(-) A-I      intronic
chr14:51459247(-) A-I      intronic
chr14:51461285(-) A-I      intronic
chr14:51459163(-) A-I      intronic
chr14:51454722(-) A-I      intronic
chr14:51459234(-) A-I      intronic
chr14:51456789(-) A-I      intronic
chr14:51458504(-) A-I      intronic
chr14:51460411(-) A-I      intronic
chr14:51456833(-) A-I      intronic
chr14:51459039(-) A-I      intronic
chr14:51460906(-) A-I      intronic
chr14:51461851(-) A-I      intronic
chr14:51454806(-) A-I      intronic
chr14:51456890(-) A-I      intronic
chr14:51461198(-) A-I      intronic
chr14:51459228(-) A-I      intronic
chr14:51461025(-) A-I      intronic
chr14:51456963(-) A-I      intronic
chr14:51459091(-) A-I      intronic
chr14:51518557(-) A-I      intronic
chr14:51527951(-) A-I      intronic
chr14:51461820(-) A-I      intronic
chr14:51521088(-) A-I      intronic
chr14:51482813(-) A-I      intronic
chr14:51461238(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TRIM9
chr14:51442439-51442440(-) m6A 3'UTR       24981863
chr14:51442507-51442508(-) m6A 3'UTR       24981863
chr14:51443060-51443061(-) m6A 3'UTR       24981863
chr14:51443296-51443297(-) m6A 3'UTR       -
chr14:51443304-51443305(-) m6A 3'UTR       -
chr14:51443314-51443315(-) m6A 3'UTR       -
chr14:51443350-51443351(-) m6A 3'UTR       -
chr14:51443649-51443650(-) m6A 3'UTR       -
chr14:51446179-51446180(-) m6A CDS       24981863
chr14:51446204-51446205(-) m6A CDS       24981863
chr14:51448562-51448563(-) m6A CDS//exon       25456834//24981863//22608085
chr14:51448710-51448711(-) m6A CDS//exon       22608085
chr14:51448781-51448782(-) m6A CDS//exon       -
chr14:51464456-51464457(-) m6A 3'UTR//intron       24981863
chr14:51560950-51560951(-) m6A CDS       27773536
chr14:51560965-51560966(-) m6A CDS       27773536
chr14:51561108-51561109(-) m6A CDS       -
chr14:51561433-51561434(-) m6A CDS       24209618
chr14:51561460-51561461(-) m6A CDS       24209618
chr14:51561466-51561467(-) m6A CDS       -
chr14:51561536-51561537(-) m6A CDS       -
chr14:51561666-51561667(-) m6A 5'UTR       27773536
chr14:51561734-51561735(-) m6A 5'UTR       27773536
chr14:51561887-51561888(-) m6A 5'UTR       -
chr14:51561995-51561996(-) m6A 5'UTR       -
chr14:51562005-51562006(-) m6A 5'UTR       -
chr14:51562021-51562022(-) m6A 5'UTR       -
chr14:51562142-51562143(-) m6A 5'UTR       -
chr14:51562731-51562732(-) m6A 5'UTR       25456834//22608085
chr14:51562755-51562756(-) m6A 5'UTR       22608085
chr14:51562776-51562777(-) m6A 5'UTR       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TRIM9
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART20-5p
Interactor2: TRIM9

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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