Basic Information:

  VIRBase ID:  

VHID00383663

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART20-5p:  MIMAT0003719          ADH5:  NM_000671     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART20-5p	ADH5
miRBase Accession/Entrez ID	MIMAT0003719	128
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ADH-3//ADHX//AMEDS//BMFS7//FALDH//FDH//GSH-FDH//GSNOR//HEL-S-60p

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ADH5	chr4:100004007(-) A-I      intronic chr4:100004008(-) A-I      intronic chr4:100004011(-) A-I      intronic chr4:100004603(-) A-I      intronic chr4:100004629(-) A-I      intronic chr4:99999652(-) A-I      intronic chr4:99999732(-) A-I      intronic chr4:99999759(-) A-I      intronic chr4:100004668(-) A-I      intronic chr4:99999809(-) A-I      intronic chr4:99999820(-) A-I      intronic chr4:100004017(-) A-I      intronic chr4:100004737(-) A-I      intronic chr4:99998523(-) A-I      intronic chr4:99998430(-) A-I      intronic chr4:99998596(-) A-I      intronic chr4:100004675(-) A-I      intronic chr4:99999716(-) A-I      intronic chr4:100004102(-) A-I      intronic chr4:99999586(-) A-I      intronic chr4:99999623(-) A-I      intronic chr4:99998438(-) A-I      intronic chr4:100004108(-) A-I      intronic chr4:99998559(-) A-I      intronic chr4:99999700(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ADH5	chr4:99996376(-) C-A intron -    22484847 chr4:99996545(-) C-T intron -    22484847 chr4:99996549(-) A-G intron -    22484847 chr4:99999811(-) A-G intron -    22484847 chr4:100004102(-) A-G intron -    22484847 chr4:100004108(-) A-G intron -    22484847 chr4:100004585(-) A-G intron -    22484847 chr4:100004675(-) A-G intron -    22484847 chr4:100007187(-) G-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ADH5	chr4:100003183-100003184(-) m6A 3'UTR//CDS//exon//intron       24981863//27371828 chr4:100006664-100006665(-) m6A 3'UTR//exon//intron       24981863 chr4:100006689-100006690(-) m6A 3'UTR//exon//intron       24981863 chr4:100006701-100006702(-) m6A 3'UTR//exon//intron       24981863 chr4:100006756-100006757(-) m6A CDS//exon//intron       24981863 chr4:100009852-100009853(-) m6A 5'UTR//exon       24981863 chr4:99996826-99996827(-) m6A exon//intron       27773535 chr4:99996836-99996837(-) m6A exon//intron       27773535 chr4:99996899-99996900(-) m6A exon//intron       27773535 chr4:99996913-99996914(-) m6A exon//intron       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ADH5	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART20-5p
Interactor2: ADH5

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg