Detail Information

Basic Information:


  VIRBase ID:  

VHID00383371

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART19-3p:           KCTD8:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART19-3p KCTD8
miRBase
Accession/Entrez ID		 MIMAT0003718 386617
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KCTD8
chr4:44346294(-) A-I      intronic
chr4:44342476(-) A-I      intronic
chr4:44342472(-) A-I      intronic
chr4:44319461(-) A-I      intronic
chr4:44319345(-) A-I      intronic
chr4:44409532(-) A-I      intronic
chr4:44392521(-) A-I      intronic
chr4:44219582(-) A-I      intronic
chr4:44410773(-) A-I      intronic
chr4:44223434(-) A-I      intronic
chr4:44412768(-) A-I      intronic
chr4:44409606(-) A-I      intronic
chr4:44409597(-) A-I      intronic
chr4:44409550(-) A-I      intronic
chr4:44412750(-) A-I      intronic
chr4:44409541(-) A-I      intronic
chr4:44392499(-) A-I      intronic
chr4:44392518(-) A-I      intronic
chr4:44403097(-) A-I      intronic
chr4:44402633(-) A-I      intronic
chr4:44346340(-) A-I      intronic
chr4:44301907(-) A-I      intronic
chr4:44411138(-) A-I      intronic
chr4:44318778(-) A-I      intronic
chr4:44411182(-) A-I      intronic
chr4:44403142(-) A-I      intronic
chr4:44411205(-) A-I      intronic
chr4:44318951(-) A-I      intronic
chr4:44403017(-) A-I      intronic
chr4:44402634(-) A-I      intronic
chr4:44411197(-) A-I      intronic
chr4:44345941(-) A-I      intronic
chr4:44402914(-) A-I      intronic
chr4:44318918(-) A-I      intronic
chr4:44407399(-) A-I      intronic
chr4:44403078(-) A-I      intronic
chr4:44360765(-) A-I      intronic
chr4:44403143(-) A-I      intronic
chr4:44410800(-) A-I      intronic
chr4:44410854(-) A-I      intronic
chr4:44409568(-) A-I      intronic
chr4:44311191(-) A-I      intronic
chr4:44318709(-) A-I      intronic
chr4:44402975(-) A-I      intronic
chr4:44320376(-) A-I      intronic
chr4:44409464(-) A-I      intronic
chr4:44339498(-) A-I      intronic
chr4:44346448(-) A-I      intronic
chr4:44297261(-) A-I      intronic
chr4:44345961(-) A-I      intronic
chr4:44318711(-) A-I      intronic
chr4:44319528(-) A-I      intronic
chr4:44371702(-) A-I      intronic
chr4:44318887(-) A-I      intronic
chr4:44319537(-) A-I      intronic
chr4:44318774(-) A-I      intronic
chr4:44360766(-) A-I      intronic
chr4:44402982(-) A-I      intronic
chr4:44339436(-) A-I      intronic
chr4:44411220(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KCTD8
chr4:44176346-44176347(-) m6A 3'UTR       27773535
chr4:44176384-44176385(-) m6A 3'UTR       27773535
chr4:44176463-44176464(-) m6A 3'UTR       27773535
chr4:44176508-44176509(-) m6A 3'UTR       27773535
chr4:44176568-44176569(-) m6A 3'UTR       27773535
chr4:44176634-44176635(-) m6A 3'UTR       27773535
chr4:44176676-44176677(-) m6A 3'UTR       27773535
chr4:44176690-44176691(-) m6A 3'UTR       27773535
chr4:44176830-44176831(-) m6A CDS       27773535
chr4:44176961-44176962(-) m6A CDS       25456834//24981863//27773535
chr4:44176985-44176986(-) m6A CDS       25456834//24981863//27773535
chr4:44176995-44176996(-) m6A CDS       25456834//24981863//27773535
chr4:44177002-44177003(-) m6A CDS       25456834//24981863//27773535
chr4:44177014-44177015(-) m6A CDS       25456834//24981863//27773535
chr4:44177116-44177117(-) m6A CDS       24981863//27773535
chr4:44177180-44177181(-) m6A CDS       24981863//27773535
chr4:44177217-44177218(-) m6A CDS       24981863//27773535
chr4:44177232-44177233(-) m6A CDS       27773535
chr4:44177238-44177239(-) m6A CDS       27773535
chr4:44295444-44295445(-) m6A CDS//intron       27773535
chr4:44449791-44449792(-) m6A CDS       27773536
chr4:44449932-44449933(-) m6A CDS       27773536
chr4:44450040-44450041(-) m6A CDS       25456834//24981863//27773536
chr4:44450079-44450080(-) m6A CDS       25456834//24981863//27773536
chr4:44450196-44450197(-) m6A CDS       25456834//27773536
chr4:44450265-44450266(-) m6A CDS       25456834
chr4:44450340-44450341(-) m6A CDS       25456834//24981863
chr4:44450526-44450527(-) m6A CDS       25456834//24981863//27773536
chr4:44450542-44450543(-) m6A 5'UTR       25456834//24981863//27773536
chr4:44450686-44450687(-) m6A 5'UTR       24981863//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ebv-miR-BART19-3p
Exosome Primary dendritic cells|T cell line (J77)     21505438
KCTD8
Cytosol K562 cells     -
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART19-3p
Interactor2: KCTD8

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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