Basic Information:

  VIRBase ID:  

VHID00383064

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART19-3p:  MIMAT0003718          ZNRF2:  NM_147128     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART19-3p	ZNRF2
miRBase Accession/Entrez ID	MIMAT0003718	223082
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	RNF202

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNRF2	chr7:30338915(+) A-I      intronic chr7:30354619(+) A-I      intronic chr7:30358464(+) A-I      intronic chr7:30351722(+) A-I      intronic chr7:30382908(+) A-I      intronic chr7:30339820(+) A-I      intronic chr7:30339797(+) A-I      intronic chr7:30338987(+) A-I      intronic chr7:30355861(+) A-I      intronic chr7:30355849(+) A-I      intronic chr7:30339864(+) A-I      intronic chr7:30354550(+) A-I      intronic chr7:30332965(+) A-I      intronic chr7:30332886(+) A-I      intronic chr7:30351693(+) A-I      intronic chr7:30351732(+) A-I      intronic chr7:30351740(+) A-I      intronic chr7:30333079(+) A-I      intronic chr7:30355749(+) A-I      intronic chr7:30355757(+) A-I      intronic chr7:30355793(+) A-I      intronic chr7:30355744(+) A-I      intronic chr7:30334184(+) A-I      intronic chr7:30355825(+) A-I      intronic chr7:30355824(+) A-I      intronic chr7:30342741(+) A-I      intronic chr7:30355833(+) A-I      intronic chr7:30351827(+) A-I      intronic chr7:30334166(+) A-I      intronic chr7:30340025(+) A-I      intronic chr7:30382683(+) A-I      intronic chr7:30340836(+) A-I      intronic chr7:30340979(+) A-I      intronic chr7:30334237(+) A-I      intronic chr7:30339828(+) A-I      intronic chr7:30351835(+) A-I      intronic chr7:30400079(+) A-I      intronic chr7:30340949(+) A-I      intronic chr7:30342711(+) A-I      intronic chr7:30340913(+) A-I      intronic chr7:30332923(+) A-I      intronic chr7:30400210(+) A-I      intronic chr7:30355650(+) A-I      intronic chr7:30339865(+) A-I      intronic chr7:30355718(+) A-I      intronic chr7:30400150(+) A-I      intronic chr7:30339930(+) A-I      intronic chr7:30355655(+) A-I      intronic chr7:30355810(+) A-I      intronic chr7:30358825(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNRF2	chr7:30360009(+) A-I intron -    21960545 chr7:30359971(+) A-G intron -    22484847 chr7:30359972(+) A-G intron -    22484847 chr7:30332923(+) A-G intron -    22484847 chr7:30333030(+) A-G intron -    22484847 chr7:30339607(+) A-G intron -    22484847 chr7:30339826(+) A-G intron -    22484847 chr7:30339828(+) A-G intron -    22484847 chr7:30339865(+) A-G intron -    22484847 chr7:30339904(+) A-G intron -    22484847 chr7:30358825(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNRF2	chr7:30324006-30324007(+) m6A 5'UTR       - chr7:30324043-30324044(+) m6A 5'UTR       - chr7:30324649-30324650(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828 chr7:30324655-30324656(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828 chr7:30324727-30324728(+) m6A 5'UTR       24284625//24209618//25456834//24981863 chr7:30324971-30324972(+) m6A 5'UTR       24209618//25456834//24981863//22575960 chr7:30324984-30324985(+) m6A CDS       24209618//25456834//24981863//22575960 chr7:30325072-30325073(+) m6A CDS       25456834//24981863 chr7:30325286-30325287(+) m6A CDS//exon       - chr7:30325316-30325317(+) m6A CDS//exon       24209618 chr7:30325358-30325359(+) m6A CDS//exon       24209618 chr7:30405680-30405681(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr7:30405713-30405714(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr7:30405757-30405758(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr7:30405777-30405778(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr7:30405799-30405800(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr7:30405816-30405817(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr7:30405830-30405831(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr7:30405844-30405845(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr7:30405859-30405860(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr7:30405924-30405925(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART19-3p	Exosome Primary dendritic cells|T cell line (J77)     21505438
	ZNRF2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART19-3p
Interactor2: ZNRF2

Evidence Support:

Prediction-Evidence	miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg