Basic Information:

  VIRBase ID:  

VHID00381749

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART19-3p:  MIMAT0003718          PLEKHF2:  NM_024613     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART19-3p	PLEKHF2
miRBase Accession/Entrez ID	MIMAT0003718	79666
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EAPF//PHAFIN2//ZFYVE18

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PLEKHF2	chr8:96157024(+) A-I      intronic chr8:96156821(+) A-I      intronic chr8:96157726(+) A-I      intronic chr8:96154717(+) A-I      intronic chr8:96157732(+) A-I      intronic chr8:96157120(+) A-I      intronic chr8:96157721(+) A-I      intronic chr8:96167873(+) A-I      3'UTR chr8:96157012(+) A-I      intronic chr8:96154718(+) A-I      intronic chr8:96156974(+) A-I      intronic chr8:96151667(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PLEKHF2	chr8:96156975(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PLEKHF2	chr8:96146137-96146138(+) m6A 5'UTR       24981863 chr8:96146212-96146213(+) m6A 5'UTR       24209618//24981863//22608085 chr8:96146319-96146320(+) m6A 5'UTR//intron       22608085 chr8:96166291-96166292(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr8:96166330-96166331(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr8:96166499-96166500(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:96166555-96166556(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr8:96166581-96166582(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr8:96166689-96166690(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:96166703-96166704(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:96166915-96166916(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:96166945-96166946(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:96167024-96167025(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:96167137-96167138(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART19-3p	Exosome Primary dendritic cells|T cell line (J77)     21505438
	PLEKHF2	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART19-3p
Interactor2: PLEKHF2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg