Detail Information

Basic Information:


  VIRBase ID:  

VHID00379786

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART19-3p:           CPLX1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART19-3p CPLX1
miRBase
Accession/Entrez ID		 MIMAT0003718 10815
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - CPX-I//CPX1//DEE63//EIEE63

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CPLX1
chr4:794644(-) A-I      intronic
chr4:794642(-) A-I      intronic
chr4:790243(-) A-I      intronic
chr4:790242(-) A-I      intronic
chr4:791221(-) A-I      intronic
chr4:790244(-) A-I      intronic
chr4:794610(-) A-I      intronic
chr4:794626(-) A-I      intronic
chr4:794636(-) A-I      intronic
chr4:792292(-) A-I      intronic
chr4:810515(-) A-I      intronic
chr4:806887(-) A-I      intronic
chr4:808139(-) A-I      intronic
chr4:792344(-) A-I      intronic
chr4:806841(-) A-I      intronic
chr4:806909(-) A-I      intronic
chr4:790198(-) A-I      intronic
chr4:796652(-) A-I      intronic
chr4:792360(-) A-I      intronic
chr4:791253(-) A-I      intronic
chr4:801401(-) A-I      intronic
chr4:794683(-) A-I      intronic
chr4:806798(-) A-I      intronic
chr4:806966(-) A-I      intronic
chr4:806941(-) A-I      intronic
chr4:791254(-) A-I      intronic
chr4:806833(-) A-I      intronic
chr4:803867(-) A-I      intronic
chr4:801856(-) A-I      intronic
chr4:794722(-) A-I      intronic
chr4:797606(-) A-I      intronic
chr4:806890(-) A-I      intronic
chr4:804879(-) A-I      intronic
chr4:808942(-) A-I      intronic
chr4:793468(-) A-I      intronic
chr4:796656(-) A-I      intronic
chr4:794774(-) A-I      intronic
chr4:792426(-) A-I      intronic
chr4:791815(-) A-I      intronic
chr4:792397(-) A-I      intronic
chr4:790184(-) A-I      intronic
chr4:801810(-) A-I      intronic
chr4:808133(-) A-I      intronic
chr4:794693(-) A-I      intronic
chr4:791880(-) A-I      intronic
chr4:794418(-) A-I      intronic
chr4:791806(-) A-I      intronic
chr4:804664(-) A-I      intronic
chr4:794240(-) A-I      intronic
chr4:793568(-) A-I      intronic
chr4:806929(-) A-I      intronic
chr4:791661(-) A-I      intronic
chr4:790247(-) A-I      intronic
chr4:796725(-) A-I      intronic
chr4:810118(-) A-I      intronic
chr4:791599(-) A-I      intronic
chr4:806970(-) A-I      intronic
chr4:792431(-) A-I      intronic
chr4:792288(-) A-I      intronic
chr4:796590(-) A-I      intronic
chr4:791976(-) A-I      intronic
chr4:792384(-) A-I      intronic
chr4:810558(-) A-I      intronic
chr4:796481(-) A-I      intronic
chr4:797732(-) A-I      intronic
chr4:791342(-) A-I      intronic
chr4:797307(-) A-I      intronic
chr4:806967(-) A-I      intronic
chr4:806971(-) A-I      intronic
chr4:805955(-) A-I      intronic
chr4:797709(-) A-I      intronic
chr4:804757(-) A-I      intronic
chr4:797317(-) A-I      intronic
chr4:806925(-) A-I      intronic
chr4:806137(-) A-I      intronic
chr4:806497(-) A-I      intronic
chr4:797446(-) A-I      intronic
chr4:794166(-) A-I      intronic
chr4:792457(-) A-I      intronic
chr4:810528(-) A-I      intronic
chr4:791871(-) A-I      intronic
chr4:794982(-) A-I      intronic
chr4:806990(-) A-I      intronic
chr4:801836(-) A-I      intronic
chr4:794457(-) A-I      intronic
chr4:797350(-) A-I      intronic
chr4:804497(-) A-I      intronic
chr4:797343(-) A-I      intronic
chr4:810548(-) A-I      intronic
chr4:806931(-) A-I      intronic
chr4:807006(-) A-I      intronic
chr4:790212(-) A-I      intronic
chr4:794846(-) A-I      intronic
chr4:791319(-) A-I      intronic
chr4:806111(-) A-I      intronic
chr4:796493(-) A-I      intronic
chr4:797325(-) A-I      intronic
chr4:810202(-) A-I      intronic
chr4:792238(-) A-I      intronic
chr4:790266(-) A-I      intronic
chr4:797636(-) A-I      intronic
chr4:794761(-) A-I      intronic
chr4:796595(-) A-I      intronic
chr4:791532(-) A-I      intronic
chr4:810185(-) A-I      intronic
chr4:804663(-) A-I      intronic
chr4:796553(-) A-I      intronic
chr4:790330(-) A-I      intronic
chr4:810175(-) A-I      intronic
chr4:791980(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CPLX1
chr4:804663(-) A-I intron -    15342557
chr4:804664(-) A-I intron -    15342557
chr4:804757(-) A-I intron -    15342557
chr4:804758(-) A-I intron -    15342557
chr4:805327(-) A-I intron -    15342557
chr4:805955(-) A-I intron -    15342557
chr4:805974(-) A-I intron -    15342557
chr4:806031(-) A-I intron -    15342557
chr4:806111(-) A-I intron -    15342557
chr4:806497(-) A-I intron -    15342557
chr4:806798(-) A-I intron -    15342557
chr4:806833(-) A-I intron -    15342557
chr4:806836(-) A-I intron -    15342557
chr4:806841(-) A-I intron -    15342557
chr4:806861(-) A-I intron -    15342557
chr4:806887(-) A-I intron -    15342557
chr4:806890(-) A-I intron -    15342557
chr4:806905(-) A-I intron -    15342557
chr4:806909(-) A-I intron -    15342557
chr4:806925(-) A-I intron -    15342557
chr4:806929(-) A-I intron -    15342557
chr4:806931(-) A-I intron -    15342557
chr4:806941(-) A-I intron -    15342557
chr4:806945(-) A-I intron -    15342557
chr4:806966(-) A-I intron -    15342557
chr4:806967(-) A-I intron -    15342557
chr4:806970(-) A-I intron -    15342557
chr4:806971(-) A-I intron -    15342557
chr4:806977(-) A-I intron -    15342557
chr4:806990(-) A-I intron -    15342557
chr4:807006(-) A-I intron -    15342557
chr4:807009(-) A-I intron -    15342557

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CPLX1
chr4:779468-779469(-) m6A 3'UTR       27371828
chr4:779520-779521(-) m6A 3'UTR       27371828
chr4:779541-779542(-) m6A 3'UTR       27371828
chr4:780111-780112(-) m6A 3'UTR       27371828
chr4:780276-780277(-) m6A 3'UTR//exon       24284625//25456834//27371828//27773536
chr4:780304-780305(-) m6A CDS//exon       24284625//25456834//27371828//27773536
chr4:780340-780341(-) m6A CDS//exon       24284625//25456834//27371828//27773536
chr4:780470-780471(-) m1A CDS//exon       26863196
chr4:786224-786225(-) m6A CDS//exon       24284625//24209618//27371828//27773536
chr4:786347-786348(-) m6A CDS//exon       24284625//24981863//27371828//27773536
chr4:786383-786384(-) m6A 5'UTR//CDS//exon       24284625//27371828
chr4:786437-786438(-) m6A exon//intron       24284625//27371828
chr4:786455-786456(-) m6A exon//intron       24284625//27371828
chr4:798573-798574(-) m6A 5'UTR//intron       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ebv-miR-BART19-3p
Exosome Primary dendritic cells|T cell line (J77)     21505438
CPLX1
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART19-3p
Interactor2: CPLX1

Evidence Support:


Prediction-Evidence miRanda//Rep//Targetscan
Support Database RepTar//VmiReg

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