Basic Information:

  VIRBase ID:  

VHID00378261

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART19-3p:  MIMAT0003718          PAWR:  NM_002583     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART19-3p	PAWR
miRBase Accession/Entrez ID	MIMAT0003718	5074
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Par-4//PAR4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PAWR	chr12:80009796(-) A-I      intronic chr12:80009586(-) A-I      intronic chr12:79988710(-) A-I      intronic chr12:79994394(-) A-I      intronic chr12:79994487(-) A-I      intronic chr12:79989447(-) A-I      intronic chr12:79992609(-) A-I      intronic chr12:79992787(-) A-I      intronic chr12:79994370(-) A-I      intronic chr12:79994425(-) A-I      intronic chr12:79994431(-) A-I      intronic chr12:79994434(-) A-I      intronic chr12:79994435(-) A-I      intronic chr12:79994472(-) A-I      intronic chr12:79996599(-) A-I      intronic chr12:80069107(-) A-I      intronic chr12:80019488(-) A-I      intronic chr12:79996569(-) A-I      intronic chr12:80032866(-) A-I      intronic chr12:79997014(-) A-I      intronic chr12:79996890(-) A-I      intronic chr12:79996828(-) A-I      intronic chr12:80002102(-) A-I      intronic chr12:80011032(-) A-I      intronic chr12:80032830(-) A-I      intronic chr12:80032760(-) A-I      intronic chr12:80026421(-) A-I      intronic chr12:80026416(-) A-I      intronic chr12:80026369(-) A-I      intronic chr12:80026368(-) A-I      intronic chr12:80057535(-) A-I      intronic chr12:80054946(-) A-I      intronic chr12:80054943(-) A-I      intronic chr12:80054942(-) A-I      intronic chr12:80054559(-) A-I      intronic chr12:80026250(-) A-I      intronic chr12:80026199(-) A-I      intronic chr12:80054466(-) A-I      intronic chr12:80025789(-) A-I      intronic chr12:80020178(-) A-I      intronic chr12:80012087(-) A-I      intronic chr12:80012086(-) A-I      intronic chr12:80011985(-) A-I      intronic chr12:80011971(-) A-I      intronic chr12:80011085(-) A-I      intronic chr12:80011050(-) A-I      intronic chr12:80011046(-) A-I      intronic chr12:80010966(-) A-I      intronic chr12:80010960(-) A-I      intronic chr12:80054546(-) A-I      intronic chr12:80009602(-) A-I      intronic chr12:79996852(-) A-I      intronic chr12:80054432(-) A-I      intronic chr12:80052617(-) A-I      intronic chr12:79996848(-) A-I      intronic chr12:79996564(-) A-I      intronic chr12:79996555(-) A-I      intronic chr12:80052605(-) A-I      intronic chr12:80052581(-) A-I      intronic chr12:79996544(-) A-I      intronic chr12:80043488(-) A-I      intronic chr12:79995231(-) A-I      intronic chr12:79994450(-) A-I      intronic chr12:80043476(-) A-I      intronic chr12:80043446(-) A-I      intronic chr12:79994329(-) A-I      intronic chr12:80035518(-) A-I      intronic chr12:80034413(-) A-I      intronic chr12:80034399(-) A-I      intronic chr12:79988747(-) A-I      intronic chr12:79988739(-) A-I      intronic chr12:80032896(-) A-I      intronic chr12:80032841(-) A-I      intronic chr12:80032831(-) A-I      intronic chr12:79988700(-) A-I      intronic chr12:80032825(-) A-I      intronic chr12:79987511(-) A-I      intronic chr12:80032817(-) A-I      intronic chr12:80032804(-) A-I      intronic chr12:80032776(-) A-I      intronic chr12:80034303(-) A-I      intronic chr12:79992641(-) A-I      intronic chr12:79997025(-) A-I      intronic chr12:80019943(-) A-I      intronic chr12:80009620(-) A-I      intronic chr12:79996967(-) A-I      intronic chr12:79990921(-) A-I      intronic chr12:79988691(-) A-I      intronic chr12:79996589(-) A-I      intronic chr12:79994440(-) A-I      intronic chr12:79991077(-) A-I      intronic chr12:80002808(-) A-I      intronic chr12:79988724(-) A-I      intronic chr12:79997005(-) A-I      intronic chr12:79994501(-) A-I      intronic chr12:79995111(-) A-I      intronic chr12:79996804(-) A-I      intronic chr12:80054947(-) A-I      intronic chr12:79996551(-) A-I      intronic chr12:79997557(-) A-I      intronic chr12:79992681(-) A-I      intronic chr12:80019930(-) A-I      intronic chr12:80026277(-) A-I      intronic chr12:79994421(-) A-I      intronic chr12:79996952(-) A-I      intronic chr12:79988692(-) A-I      intronic chr12:79996880(-) A-I      intronic chr12:80009657(-) A-I      intronic chr12:79995271(-) A-I      intronic chr12:80011976(-) A-I      intronic chr12:79991132(-) A-I      intronic chr12:79994493(-) A-I      intronic chr12:79996548(-) A-I      intronic chr12:80019822(-) A-I      intronic chr12:80026424(-) A-I      intronic chr12:79996568(-) A-I      intronic chr12:79996978(-) A-I      intronic chr12:80002568(-) A-I      intronic chr12:79997692(-) A-I      intronic chr12:79994383(-) A-I      intronic chr12:79996872(-) A-I      intronic chr12:79991095(-) A-I      intronic chr12:80019777(-) A-I      intronic chr12:79989510(-) A-I      intronic chr12:80019726(-) A-I      intronic chr12:80019844(-) A-I      intronic chr12:80054558(-) A-I      intronic chr12:79996893(-) A-I      intronic chr12:79994408(-) A-I      intronic chr12:80035519(-) A-I      intronic chr12:79997027(-) A-I      intronic chr12:80001664(-) A-I      intronic chr12:80052833(-) A-I      intronic chr12:80032906(-) A-I      intronic chr12:80009672(-) A-I      intronic chr12:79995227(-) A-I      intronic chr12:80033809(-) A-I      intronic chr12:79996777(-) A-I      intronic chr12:80019942(-) A-I      intronic chr12:80068974(-) A-I      intronic chr12:79996801(-) A-I      intronic chr12:79991071(-) A-I      intronic chr12:80033863(-) A-I      intronic chr12:80009666(-) A-I      intronic chr12:79996900(-) A-I      intronic chr12:79990954(-) A-I      intronic chr12:79994437(-) A-I      intronic chr12:79996940(-) A-I      intronic chr12:80002608(-) A-I      intronic chr12:79989556(-) A-I      intronic chr12:79996610(-) A-I      intronic chr12:79999823(-) A-I      intronic chr12:80024218(-) A-I      intronic chr12:79996554(-) A-I      intronic chr12:79987551(-) A-I      intronic chr12:79989520(-) A-I      intronic chr12:79994496(-) A-I      intronic chr12:79995124(-) A-I      intronic chr12:79988693(-) A-I      intronic chr12:79989461(-) A-I      intronic chr12:79987588(-) A-I      intronic chr12:79987575(-) A-I      intronic chr12:80012047(-) A-I      intronic chr12:79991117(-) A-I      intronic chr12:79996553(-) A-I      intronic chr12:80032857(-) A-I      intronic chr12:79994997(-) A-I      intronic chr12:79990917(-) A-I      intronic chr12:79996562(-) A-I      intronic chr12:79995228(-) A-I      intronic chr12:79996973(-) A-I      intronic chr12:79994283(-) A-I      intronic chr12:80034426(-) A-I      intronic chr12:80034338(-) A-I      intronic chr12:79996765(-) A-I      intronic chr12:79994468(-) A-I      intronic chr12:79995076(-) A-I      intronic chr12:80061901(-) A-I      intronic chr12:79994442(-) A-I      intronic chr12:79997009(-) A-I      intronic chr12:79991101(-) A-I      intronic chr12:79996948(-) A-I      intronic chr12:79996557(-) A-I      intronic chr12:79996830(-) A-I      intronic chr12:80026709(-) A-I      intronic chr12:79991135(-) A-I      intronic chr12:79996558(-) A-I      intronic chr12:79996953(-) A-I      intronic chr12:79994441(-) A-I      intronic chr12:80026395(-) A-I      intronic chr12:80061856(-) A-I      intronic chr12:79988534(-) A-I      intronic chr12:80061939(-) A-I      intronic chr12:80012127(-) A-I      intronic chr12:79994482(-) A-I      intronic chr12:79996805(-) A-I      intronic chr12:80052708(-) A-I      intronic chr12:79994515(-) A-I      intronic chr12:79990959(-) A-I      intronic chr12:80069153(-) A-I      intronic chr12:79996842(-) A-I      intronic chr12:79996613(-) A-I      intronic chr12:79996770(-) A-I      intronic chr12:79996904(-) A-I      intronic chr12:79990936(-) A-I      intronic chr12:79991118(-) A-I      intronic chr12:79994532(-) A-I      intronic chr12:79994531(-) A-I      intronic chr12:80019832(-) A-I      intronic chr12:80054557(-) A-I      intronic chr12:80052888(-) A-I      intronic chr12:79996856(-) A-I      intronic chr12:79994359(-) A-I      intronic chr12:79989550(-) A-I      intronic chr12:80026861(-) A-I      intronic chr12:80052576(-) A-I      intronic chr12:79995070(-) A-I      intronic chr12:80032886(-) A-I      intronic chr12:79994439(-) A-I      intronic chr12:79988698(-) A-I      intronic chr12:80011969(-) A-I      intronic chr12:79994500(-) A-I      intronic chr12:79988635(-) A-I      intronic chr12:79992613(-) A-I      intronic chr12:79996898(-) A-I      intronic chr12:79989519(-) A-I      intronic chr12:79997017(-) A-I      intronic chr12:80034438(-) A-I      intronic chr12:80012046(-) A-I      intronic chr12:80034412(-) A-I      intronic chr12:79994378(-) A-I      intronic chr12:79988589(-) A-I      intronic chr12:79994364(-) A-I      intronic chr12:80012011(-) A-I      intronic chr12:79996949(-) A-I      intronic chr12:79996919(-) A-I      intronic chr12:80012097(-) A-I      intronic chr12:79996561(-) A-I      intronic chr12:79988625(-) A-I      intronic chr12:79989523(-) A-I      intronic chr12:79996585(-) A-I      intronic chr12:79996530(-) A-I      intronic chr12:80032962(-) A-I      intronic chr12:80054977(-) A-I      intronic chr12:80026347(-) A-I      intronic chr12:80042345(-) A-I      intronic chr12:79995252(-) A-I      intronic chr12:79994446(-) A-I      intronic chr12:79989605(-) A-I      intronic chr12:79996850(-) A-I      intronic chr12:80009831(-) A-I      intronic chr12:79996935(-) A-I      intronic chr12:79996560(-) A-I      intronic chr12:79990927(-) A-I      intronic chr12:79996839(-) A-I      intronic chr12:80063640(-) A-I      intronic chr12:80033796(-) A-I      intronic chr12:79995204(-) A-I      intronic chr12:79996552(-) A-I      intronic chr12:79994443(-) A-I      intronic chr12:79994485(-) A-I      intronic chr12:79987438(-) A-I      intronic chr12:80020318(-) A-I      intronic chr12:79996556(-) A-I      intronic chr12:79996559(-) A-I      intronic chr12:80011088(-) A-I      intronic chr12:80009774(-) A-I      intronic chr12:79995119(-) A-I      intronic chr12:79994465(-) A-I      intronic chr12:79994438(-) A-I      intronic chr12:79994377(-) A-I      intronic chr12:79996858(-) A-I      intronic chr12:80026869(-) A-I      intronic chr12:80026340(-) A-I      intronic chr12:79991039(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PAWR	chr12:79995070(-) A-I intron -    15342557 chr12:79995227(-) A-I intron -    15342557 chr12:79996557(-) A-I intron -    15342557 chr12:79996558(-) A-I intron -    15342557 chr12:79996562(-) A-I intron -    15342557 chr12:79996804(-) A-I intron -    15342557 chr12:79996973(-) A-I intron -    15342557   //21960545 chr12:79994364(-) A-I intron -    21960545   //22327324 chr12:79994377(-) A-I intron -    22327324 chr12:79994378(-) A-I intron -    22327324 chr12:79994468(-) A-I intron -    21960545   //22327324 chr12:79996568(-) A-I intron -    22327324 chr12:79996610(-) A-I intron -    21960545   //22327324 chr12:79996858(-) A-I intron -    22327324 chr12:80019675(-) A-I intron -    22028664 chr12:80019726(-) A-I intron -    22028664 chr12:80019777(-) A-I intron -    22028664 chr12:80019822(-) A-I intron -    22028664 chr12:80019832(-) A-I intron -    22028664 chr12:80019844(-) A-I intron -    22028664 chr12:80019930(-) A-I intron -    22028664 chr12:80019942(-) A-I intron -    22028664 chr12:80019943(-) A-I intron -    22028664 chr12:79996530(-) A-I intron -    21960545 chr12:79996839(-) A-I intron -    21960545 chr12:79996904(-) A-I intron -    21960545 chr12:79997017(-) A-I intron -    21960545 chr12:79988589(-) A-G intron -    22484847 chr12:79988635(-) A-G intron -    22484847 chr12:79990921(-) A-G intron -    22484847 chr12:79990927(-) A-G intron -    22484847 chr12:79990959(-) A-G intron -    22484847 chr12:79991071(-) A-G intron -    22484847 chr12:79992613(-) A-G intron -    22484847 chr12:79992681(-) A-G intron -    22484847 chr12:79994359(-) A-G intron -    22484847 chr12:79994364(-) A-G intron -    22484847 chr12:79994377(-) A-G intron -    22484847 chr12:79994378(-) A-G intron -    22484847 chr12:79994408(-) A-G intron -    22484847 chr12:79994437(-) A-G intron -    22484847 chr12:79994440(-) A-G intron -    22484847 chr12:79994441(-) A-G intron -    22484847 chr12:79994465(-) A-G intron -    22484847 chr12:79994468(-) A-G intron -    22484847 chr12:79994485(-) A-G intron -    22484847 chr12:79994496(-) A-G intron -    22484847 chr12:79994531(-) A-G intron -    22484847 chr12:79995227(-) A-G intron -    22484847 chr12:79996548(-) A-G intron -    22484847 chr12:79996551(-) A-G intron -    22484847 chr12:79996552(-) A-G intron -    22484847 chr12:79996553(-) A-G intron -    22484847 chr12:79996554(-) A-G intron -    22484847 chr12:79996557(-) A-G intron -    22484847 chr12:79996558(-) A-G intron -    22484847 chr12:79996559(-) A-G intron -    22484847 chr12:79996560(-) A-G intron -    22484847 chr12:79996561(-) A-G intron -    22484847 chr12:79996568(-) A-G intron -    22484847 chr12:79996585(-) A-G intron -    22484847 chr12:79996610(-) A-G intron -    22484847 chr12:79996613(-) A-G intron -    22484847 chr12:79996839(-) A-G intron -    22484847 chr12:79996856(-) A-G intron -    22484847 chr12:79996858(-) A-G intron -    22484847 chr12:79996872(-) A-G intron -    22484847 chr12:79996880(-) A-G intron -    22484847 chr12:79996935(-) A-G intron -    22484847 chr12:79996948(-) A-G intron -    22484847 chr12:79996949(-) A-G intron -    22484847 chr12:79996952(-) A-G intron -    22484847 chr12:79996953(-) A-G intron -    22484847 chr12:79996973(-) A-G intron -    22484847 chr12:79997017(-) A-G intron -    22484847 chr12:79988625(-) A-G intron -    22484847 chr12:79988692(-) A-G intron -    22484847 chr12:79988693(-) A-G intron -    22484847 chr12:79988698(-) A-G intron -    22484847 chr12:79989519(-) A-G intron -    22484847 chr12:79990856(-) C-A intron -    22484847 chr12:79991095(-) A-G intron -    22484847 chr12:79991101(-) A-G intron -    22484847 chr12:79991132(-) A-G intron -    22484847 chr12:79992641(-) A-G intron -    22484847 chr12:79995204(-) A-G intron -    22484847 chr12:79996765(-) A-G intron -    22484847 chr12:79996804(-) A-G intron -    22484847 chr12:79996967(-) A-G intron -    22484847 chr12:79996978(-) A-G intron -    22484847 chr12:79997005(-) A-G intron -    22484847 chr12:80009666(-) A-G intron -    22484847 chr12:80009672(-) A-G intron -    22484847 chr12:80019832(-) A-G intron -    22484847 chr12:80034338(-) A-G intron -    22484847 chr12:80034426(-) A-G intron -    22484847 chr12:80052576(-) A-G intron -    22484847 chr12:80052708(-) A-G intron -    22484847 chr12:80052833(-) A-G intron -    22484847 chr12:80054558(-) A-G intron -    22484847 chr12:80054947(-) A-G intron -    22484847 chr12:80068974(-) A-G intron -    22484847 chr12:80069089(-) C-T intron -    22484847 chr12:80069153(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PAWR	chr12:79978695-79978696(-) m6A 3'UTR//intron       27773535 chr12:79978704-79978705(-) m6A 3'UTR//intron       27773535 chr12:79978735-79978736(-) m6A 3'UTR//intron       27773535 chr12:79978794-79978795(-) m6A 3'UTR//intron       27773535 chr12:79978821-79978822(-) m6A 3'UTR//intron       27773535 chr12:79978869-79978870(-) m6A 3'UTR//intron       27773535 chr12:79980805-79980806(-) m6A 3'UTR//intron       27773535 chr12:79980885-79980886(-) m6A 3'UTR//intron       27773535 chr12:79980895-79980896(-) m6A 3'UTR//intron       27773535 chr12:79980909-79980910(-) m6A 3'UTR//intron       27773535 chr12:79984173-79984174(-) m6A 3'UTR//intron       - chr12:79984196-79984197(-) m6A 3'UTR//intron       24981863 chr12:79986257-79986258(-) m6A 3'UTR//intron       27773535//22608085 chr12:79986350-79986351(-) m6A 3'UTR//exon//intron       24981863//27773535//22608085 chr12:79986375-79986376(-) m6A 3'UTR//exon//intron       24981863//27773535//22608085 chr12:79986421-79986422(-) m6A CDS//exon//intron       24981863//27773535//22608085 chr12:79986443-79986444(-) m6A CDS//exon//intron       24981863//27773535//22608085 chr12:79988138-79988139(-) m6A CDS//exon//intron       24981863//27773535//22575960//22608085 chr12:79988171-79988172(-) m6A CDS//exon//intron       24981863//27773535//22575960//22608085 chr12:79988180-79988181(-) m6A CDS//exon//intron       24981863//27773535//22575960//22608085 chr12:79988187-79988188(-) m6A CDS//exon//intron       24981863//27773535//22575960//22608085 chr12:79988195-79988196(-) m6A CDS//exon//intron       24981863//27773535//22575960//22608085 chr12:79990391-79990392(-) m6A CDS//exon//intron       24981863//27773535 chr12:79991615-79991616(-) m6A exon//intron       27773535 chr12:79991680-79991681(-) m6A exon//intron       27773535 chr12:79997483-79997484(-) m6A 3'UTR//intron       27773535 chr12:79998488-79998489(-) m6A CDS//intron       27773535 chr12:80007376-80007377(-) m6A CDS//intron       27773535 chr12:80014883-80014884(-) Tm CDS//intron       - chr12:80014889-80014890(-) m6A CDS//intron       24981863//27773535 chr12:80014913-80014914(-) m6A CDS//exon//intron       24209618//24981863//27773535 chr12:80025908-80025909(-) m6A exon//intron       24209618//24981863//27773535//22575960 chr12:80061770-80061771(-) m6A exon//intron       24209618 chr12:80061779-80061780(-) m6A exon//intron       24209618 chr12:80061875-80061876(-) m6A exon//intron       24209618 chr12:80061898-80061899(-) m6A exon//intron       24209618 chr12:80062114-80062115(-) m6A exon//intron       24209618 chr12:80062148-80062149(-) m6A exon//intron       24209618 chr12:80062155-80062156(-) m6A exon//intron       24209618 chr12:80082212-80082213(-) m6A exon//intron       24209618//24981863//22575960 chr12:80083576-80083577(-) Cm CDS//exon       - chr12:80083755-80083756(-) m6A CDS//exon       24209618//24981863//27371828//27773536//22575960 chr12:80083920-80083921(-) m6A CDS       24284625//24209618//25456834//27371828//27773536 chr12:80083971-80083972(-) m6A CDS       24284625//24209618//25456834//27773536 chr12:80084002-80084003(-) m6A CDS       24284625//24209618//25456834//27773536 chr12:80084520-80084521(-) m6A 5'UTR//intron       - chr12:80084527-80084528(-) m6A 5'UTR//intron       - chr12:80084580-80084581(-) m6A 5'UTR//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART19-3p	Exosome Primary dendritic cells|T cell line (J77)     21505438
	PAWR	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART19-3p
Interactor2: PAWR

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg