Basic Information:

  VIRBase ID:  

VHID00378049

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART19-3p:  MIMAT0003718          NBR1:  NM_005899     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART19-3p	NBR1
miRBase Accession/Entrez ID	MIMAT0003718	4077
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	1A1-3B//IAI3B//M17S2//MIG19

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NBR1	chr17:41360798(+) A-I      intronic chr17:41337431(+) A-I      intronic chr17:41350793(+) A-I      intronic chr17:41350812(+) A-I      intronic chr17:41358080(+) A-I      intronic chr17:41353022(+) A-I      intronic chr17:41360857(+) A-I      intronic chr17:41360871(+) A-I      intronic chr17:41337422(+) A-I      intronic chr17:41325361(+) A-I      intronic chr17:41357663(+) A-I      intronic chr17:41337418(+) A-I      intronic chr17:41360808(+) A-I      intronic chr17:41360778(+) A-I      intronic chr17:41337430(+) A-I      intronic chr17:41358895(+) A-I      intronic chr17:41337475(+) A-I      intronic chr17:41361306(+) A-I      intronic chr17:41361302(+) A-I      intronic chr17:41360892(+) A-I      intronic chr17:41360862(+) A-I      intronic chr17:41360836(+) A-I      intronic chr17:41360825(+) A-I      intronic chr17:41360823(+) A-I      intronic chr17:41360820(+) A-I      intronic chr17:41337439(+) A-I      intronic chr17:41337087(+) A-I      intronic chr17:41336831(+) A-I      intronic chr17:41335863(+) A-I      intronic chr17:41335860(+) A-I      intronic chr17:41335566(+) A-I      intronic chr17:41334860(+) A-I      intronic chr17:41334133(+) A-I      intronic chr17:41333907(+) A-I      intronic chr17:41360789(+) A-I      intronic chr17:41333090(+) A-I      intronic chr17:41360751(+) A-I      intronic chr17:41359653(+) A-I      intronic chr17:41359489(+) A-I      intronic chr17:41359067(+) A-I      intronic chr17:41358862(+) A-I      intronic chr17:41358857(+) A-I      intronic chr17:41358634(+) A-I      intronic chr17:41333001(+) A-I      intronic chr17:41330628(+) A-I      intronic chr17:41330591(+) A-I      intronic chr17:41330530(+) A-I      intronic chr17:41330523(+) A-I      intronic chr17:41326888(+) A-I      intronic chr17:41326884(+) A-I      intronic chr17:41353047(+) A-I      intronic chr17:41353051(+) A-I      intronic chr17:41353064(+) A-I      intronic chr17:41358421(+) A-I      intronic chr17:41352989(+) A-I      intronic chr17:41326556(+) A-I      intronic chr17:41325409(+) A-I      intronic chr17:41325408(+) A-I      intronic chr17:41325404(+) A-I      intronic chr17:41325398(+) A-I      intronic chr17:41353964(+) A-I      intronic chr17:41354076(+) A-I      intronic chr17:41354082(+) A-I      intronic chr17:41354112(+) A-I      intronic chr17:41356059(+) A-I      intronic chr17:41356068(+) A-I      intronic chr17:41356084(+) A-I      intronic chr17:41356112(+) A-I      intronic chr17:41356191(+) A-I      intronic chr17:41356217(+) A-I      intronic chr17:41356561(+) A-I      intronic chr17:41325380(+) A-I      intronic chr17:41325252(+) A-I      intronic chr17:41325230(+) A-I      intronic chr17:41325104(+) A-I      intronic chr17:41325090(+) A-I      intronic chr17:41325086(+) A-I      intronic chr17:41324972(+) A-I      intronic chr17:41356711(+) A-I      intronic chr17:41356717(+) A-I      intronic chr17:41356721(+) A-I      intronic chr17:41356802(+) A-I      intronic chr17:41357253(+) A-I      intronic chr17:41357258(+) A-I      intronic chr17:41357288(+) A-I      intronic chr17:41357676(+) A-I      intronic chr17:41352986(+) A-I      intronic chr17:41352929(+) A-I      intronic chr17:41352917(+) A-I      intronic chr17:41352909(+) A-I      intronic chr17:41351652(+) A-I      intronic chr17:41351628(+) A-I      intronic chr17:41351579(+) A-I      intronic chr17:41357812(+) A-I      intronic chr17:41357829(+) A-I      intronic chr17:41357935(+) A-I      intronic chr17:41357944(+) A-I      intronic chr17:41357950(+) A-I      intronic chr17:41358007(+) A-I      intronic chr17:41358084(+) A-I      intronic chr17:41358088(+) A-I      intronic chr17:41351577(+) A-I      intronic chr17:41351521(+) A-I      intronic chr17:41351496(+) A-I      intronic chr17:41351430(+) A-I      intronic chr17:41356604(+) A-I      intronic chr17:41356679(+) A-I      intronic chr17:41356680(+) A-I      intronic chr17:41356685(+) A-I      intronic chr17:41356701(+) A-I      intronic chr17:41356705(+) A-I      intronic chr17:41351330(+) A-I      intronic chr17:41351221(+) A-I      intronic chr17:41351217(+) A-I      intronic chr17:41350886(+) A-I      intronic chr17:41350869(+) A-I      intronic chr17:41350801(+) A-I      intronic chr17:41350800(+) A-I      intronic chr17:41350791(+) A-I      intronic chr17:41350790(+) A-I      intronic chr17:41350494(+) A-I      intronic chr17:41350483(+) A-I      intronic chr17:41350008(+) A-I      intronic chr17:41350007(+) A-I      intronic chr17:41349985(+) A-I      intronic chr17:41349914(+) A-I      intronic chr17:41349425(+) A-I      intronic chr17:41349379(+) A-I      intronic chr17:41349358(+) A-I      intronic chr17:41349351(+) A-I      intronic chr17:41337758(+) A-I      intronic chr17:41337607(+) A-I      intronic chr17:41337603(+) A-I      intronic chr17:41357710(+) A-I      intronic chr17:41359494(+) A-I      intronic chr17:41326567(+) A-I      intronic chr17:41335794(+) A-I      intronic chr17:41356110(+) A-I      intronic chr17:41334834(+) A-I      intronic chr17:41354177(+) A-I      intronic chr17:41359509(+) A-I      intronic chr17:41358594(+) A-I      intronic chr17:41358097(+) A-I      intronic chr17:41332952(+) A-I      intronic chr17:41358035(+) A-I      intronic chr17:41353072(+) A-I      intronic chr17:41358036(+) A-I      intronic chr17:41354013(+) A-I      intronic chr17:41354154(+) A-I      intronic chr17:41358973(+) A-I      intronic chr17:41335877(+) A-I      intronic chr17:41335260(+) A-I      intronic chr17:41350940(+) A-I      intronic chr17:41337333(+) A-I      intronic chr17:41335866(+) A-I      intronic chr17:41359516(+) A-I      intronic chr17:41360783(+) A-I      intronic chr17:41353157(+) A-I      intronic chr17:41334874(+) A-I      intronic chr17:41356646(+) A-I      intronic chr17:41356617(+) A-I      intronic chr17:41359563(+) A-I      intronic chr17:41350860(+) A-I      intronic chr17:41326565(+) A-I      intronic chr17:41360727(+) A-I      intronic chr17:41324845(+) A-I      intronic chr17:41353025(+) A-I      intronic chr17:41336897(+) A-I      intronic chr17:41336983(+) A-I      intronic chr17:41337898(+) A-I      intronic chr17:41333434(+) A-I      intronic chr17:41325405(+) A-I      intronic chr17:41359394(+) A-I      intronic chr17:41359626(+) A-I      intronic chr17:41325485(+) A-I      intronic chr17:41351485(+) A-I      intronic chr17:41358603(+) A-I      intronic chr17:41359400(+) A-I      intronic chr17:41353086(+) A-I      intronic chr17:41360951(+) A-I      intronic chr17:41353015(+) A-I      intronic chr17:41355053(+) A-I      intronic chr17:41357662(+) A-I      intronic chr17:41333028(+) A-I      intronic chr17:41358848(+) A-I      intronic chr17:41350484(+) A-I      intronic chr17:41353003(+) A-I      intronic chr17:41332953(+) A-I      intronic chr17:41360730(+) A-I      intronic chr17:41353941(+) A-I      intronic chr17:41334908(+) A-I      intronic chr17:41352990(+) A-I      intronic chr17:41350064(+) A-I      intronic chr17:41351493(+) A-I      intronic chr17:41359435(+) A-I      intronic chr17:41352949(+) A-I      intronic chr17:41360943(+) A-I      intronic chr17:41351301(+) A-I      intronic chr17:41325117(+) A-I      intronic chr17:41351204(+) A-I      intronic chr17:41335043(+) A-I      intronic chr17:41359004(+) A-I      intronic chr17:41359631(+) A-I      intronic chr17:41334981(+) A-I      intronic chr17:41361176(+) A-I      intronic chr17:41337461(+) A-I      intronic chr17:41358849(+) A-I      intronic chr17:41337353(+) A-I      intronic chr17:41351126(+) A-I      intronic chr17:41337832(+) A-I      intronic chr17:41360799(+) A-I      intronic chr17:41358525(+) A-I      intronic chr17:41351222(+) A-I      intronic chr17:41335891(+) A-I      intronic chr17:41334881(+) A-I      intronic chr17:41357158(+) A-I      intronic chr17:41336924(+) A-I      intronic chr17:41354077(+) A-I      intronic chr17:41357790(+) A-I      intronic chr17:41351591(+) A-I      intronic chr17:41337968(+) A-I      intronic chr17:41333747(+) A-I      intronic chr17:41354955(+) A-I      intronic chr17:41336847(+) A-I      intronic chr17:41351654(+) A-I      intronic chr17:41360721(+) A-I      intronic chr17:41360707(+) A-I      intronic chr17:41359477(+) A-I      intronic chr17:41326973(+) A-I      intronic chr17:41350536(+) A-I      intronic chr17:41350416(+) A-I      intronic chr17:41349349(+) A-I      intronic chr17:41333881(+) A-I      intronic chr17:41353149(+) A-I      intronic chr17:41359564(+) A-I      intronic chr17:41325479(+) A-I      intronic chr17:41324857(+) A-I      intronic chr17:41350859(+) A-I      intronic chr17:41336566(+) A-I      intronic chr17:41335619(+) A-I      intronic chr17:41336985(+) A-I      intronic chr17:41325565(+) A-I      intronic chr17:41354050(+) A-I      intronic chr17:41350454(+) A-I      intronic chr17:41354118(+) A-I      intronic chr17:41326858(+) A-I      intronic chr17:41323934(+) A-I      intronic chr17:41326964(+) A-I      intronic chr17:41360784(+) A-I      intronic chr17:41356578(+) A-I      intronic chr17:41351666(+) A-I      intronic chr17:41355976(+) A-I      intronic chr17:41359518(+) A-I      intronic chr17:41360941(+) A-I      intronic chr17:41351374(+) A-I      intronic chr17:41359506(+) A-I      intronic chr17:41356019(+) A-I      intronic chr17:41323942(+) A-I      intronic chr17:41333062(+) A-I      intronic chr17:41354103(+) A-I      intronic chr17:41358074(+) A-I      intronic chr17:41353148(+) A-I      intronic chr17:41333073(+) A-I      intronic chr17:41356889(+) A-I      intronic chr17:41357742(+) A-I      intronic chr17:41360712(+) A-I      intronic chr17:41352950(+) A-I      intronic chr17:41325505(+) A-I      intronic chr17:41359480(+) A-I      intronic chr17:41350019(+) A-I      intronic chr17:41335806(+) A-I      intronic chr17:41361079(+) A-I      intronic chr17:41349927(+) A-I      intronic chr17:41356777(+) A-I      intronic chr17:41336181(+) A-I      intronic chr17:41354037(+) A-I      intronic chr17:41357010(+) A-I      intronic chr17:41333032(+) A-I      intronic chr17:41356789(+) A-I      intronic chr17:41353160(+) A-I      intronic chr17:41326835(+) A-I      intronic chr17:41351167(+) A-I      intronic chr17:41334910(+) A-I      intronic chr17:41356162(+) A-I      intronic chr17:41350950(+) A-I      intronic chr17:41337867(+) A-I      intronic chr17:41337530(+) A-I      intronic chr17:41358896(+) A-I      intronic chr17:41360875(+) A-I      intronic chr17:41335124(+) A-I      intronic chr17:41351127(+) A-I      intronic chr17:41350562(+) A-I      intronic chr17:41360852(+) A-I      intronic chr17:41358920(+) A-I      intronic chr17:41324853(+) A-I      intronic chr17:41354117(+) A-I      intronic chr17:41352947(+) A-I      intronic chr17:41358799(+) A-I      intronic chr17:41351574(+) A-I      intronic chr17:41353942(+) A-I      intronic chr17:41358963(+) A-I      intronic chr17:41359433(+) A-I      intronic chr17:41351449(+) A-I      intronic chr17:41354030(+) A-I      intronic chr17:41358011(+) A-I      intronic chr17:41337598(+) A-I      intronic chr17:41350400(+) A-I      intronic chr17:41356207(+) A-I      intronic chr17:41358937(+) A-I      intronic chr17:41356137(+) A-I      intronic chr17:41352998(+) A-I      intronic chr17:41350020(+) A-I      intronic chr17:41337435(+) A-I      intronic chr17:41335055(+) A-I      intronic chr17:41357817(+) A-I      intronic chr17:41356229(+) A-I      intronic chr17:41356766(+) A-I      intronic chr17:41358075(+) A-I      intronic chr17:41325564(+) A-I      intronic chr17:41356154(+) A-I      intronic chr17:41356010(+) A-I      intronic chr17:41326849(+) A-I      intronic chr17:41356140(+) A-I      intronic chr17:41360786(+) A-I      intronic chr17:41335178(+) A-I      intronic chr17:41360809(+) A-I      intronic chr17:41337076(+) A-I      intronic chr17:41356622(+) A-I      intronic chr17:41358044(+) A-I      intronic chr17:41351147(+) A-I      intronic chr17:41359542(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NBR1	chr17:41325565(+) A-G intron -    22484847 chr17:41333028(+) A-G intron -    22484847 chr17:41352998(+) A-G intron -    22484847 chr17:41356207(+) A-G intron -    22484847 chr17:41356789(+) A-G intron -    22484847 chr17:41357817(+) A-G intron -    22484847 chr17:41358075(+) A-G intron -    22484847 chr17:41359394(+) A-G intron -    22484847 chr17:41359477(+) A-G intron -    22484847 chr17:41359480(+) A-G intron -    22484847 chr17:41359506(+) A-G intron -    22484847 chr17:41359516(+) A-G intron -    22484847 chr17:41359563(+) A-G intron -    22484847 chr17:41360712(+) A-G intron -    22484847 chr17:41360721(+) A-G intron -    22484847 chr17:41360783(+) A-G intron -    22484847 chr17:41360799(+) A-G intron -    22484847 chr17:41360842(+) C-A intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NBR1	chr17:41322910-41322911(+) m6A 5'UTR//intron       24981863 chr17:41327821-41327822(+) m6A CDS//exon       24284625//25456834//24981863//22608085 chr17:41338277-41338278(+) m6A CDS       24981863 chr17:41338285-41338286(+) m6A CDS       24981863 chr17:41345534-41345535(+) Y CDS//exon       25219674 chr17:41352205-41352206(+) m6A CDS       24981863 chr17:41352481-41352482(+) m6A CDS       24284625//25456834//24981863//22575960 chr17:41352502-41352503(+) m6A CDS       24284625//25456834//24981863//22575960 chr17:41352519-41352520(+) m6A CDS       24284625//25456834//24981863//22575960 chr17:41352566-41352567(+) m6A CDS       24284625//25456834//24981863//22575960 chr17:41352575-41352576(+) m6A CDS       24284625//25456834//24981863//22575960 chr17:41354702-41354703(+) Cm CDS//intron       - chr17:41361940-41361941(+) m6A 3'UTR//CDS       24284625 chr17:41361995-41361996(+) m6A 3'UTR//CDS       24284625 chr17:41362014-41362015(+) m6A CDS       24284625//24981863 chr17:41362047-41362048(+) m6A CDS       24284625//24981863 chr17:41362061-41362062(+) m6A CDS       24284625//24981863//22608085 chr17:41362226-41362227(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr17:41362257-41362258(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr17:41362264-41362265(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr17:41362270-41362271(+) m6A 3'UTR       24284625//24981863//22608085 chr17:41362289-41362290(+) m6A 3'UTR       24284625//24981863//22608085 chr17:41362311-41362312(+) m6A 3'UTR       24981863 chr17:41362337-41362338(+) m6A 3'UTR       - chr17:41362966-41362967(+) m6A 3'UTR       24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ebv-miR-BART19-3p	Exosome Primary dendritic cells|T cell line (J77)     21505438
	NBR1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|HeLa-S3 cells     - Exosome Blood     - Membrane K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART19-3p
Interactor2: NBR1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg