Detail Information

Basic Information:


  VIRBase ID:  

VHID00377166

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART19-3p:           AGTR1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART19-3p AGTR1
miRBase
Accession/Entrez ID
MIMAT0003718 185
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - AG2S//AGTR1B//AT1//AT1AR//AT1B//AT1BR//AT1R//AT2R1//HAT1R

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR AGTR1
chr3:148456896(+) A-I      intronic
chr3:148456912(+) A-I      intronic
chr3:148456944(+) A-I      intronic
chr3:148456891(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase AGTR1
chr3:148458958-148458959(+) m6A CDS       24981863
chr3:148459002-148459003(+) m6A CDS       24981863
chr3:148459513-148459514(+) m6A CDS       24981863//27773535
chr3:148459663-148459664(+) m6A CDS       24981863
chr3:148459807-148459808(+) m6A CDS       24981863//27773535
chr3:148459912-148459913(+) m6A 3'UTR       24981863//27773535
chr3:148459953-148459954(+) m6A 3'UTR       24981863//27773535//22608085
chr3:148460030-148460031(+) m6A 3'UTR       24981863//27773535//22608085
chr3:148460035-148460036(+) m6A 3'UTR       24981863//27773535//22608085
chr3:148460057-148460058(+) m6A 3'UTR       24981863//27773535//22608085
chr3:148460087-148460088(+) m6A 3'UTR       24981863//27773535//22608085
chr3:148460114-148460115(+) m6A 3'UTR       24981863//27773535//22608085
chr3:148460136-148460137(+) m6A 3'UTR       24981863//27773535
chr3:148460148-148460149(+) m6A 3'UTR       24981863//27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ebv-miR-BART19-3p
Exosome Primary dendritic cells|T cell line (J77)     21505438
AGTR1
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART19-3p
Interactor2: AGTR1

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

Starting a new search, please wait ...