Detail Information

Basic Information:


  VIRBase ID:  

VHID00376747

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART18-5p:           PRSS35:      

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Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART18-5p PRSS35
miRBase
Accession/Entrez ID
MIMAT0003717 167681
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - C6orf158//dJ223E3.1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PRSS35
chr6:84225633(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PRSS35
chr6:84222395-84222396(+) m6A 5'UTR       -
chr6:84222400-84222401(+) m6A 5'UTR       -
chr6:84233205-84233206(+) m6A CDS       22608085
chr6:84233283-84233284(+) m6A CDS       22608085
chr6:84233366-84233367(+) m6A CDS       24981863//22608085
chr6:84233415-84233416(+) m6A CDS       24981863//22608085
chr6:84233439-84233440(+) m6A CDS       24981863//22608085
chr6:84233525-84233526(+) m6A CDS       24981863//22608085
chr6:84233563-84233564(+) m6A CDS       25456834//24981863//22608085
chr6:84233686-84233687(+) m6A CDS       24981863//22608085
chr6:84233913-84233914(+) m6A CDS       25456834//24981863//22608085
chr6:84233980-84233981(+) m6A CDS       25456834//24981863//22608085
chr6:84234035-84234036(+) m6A CDS       24209618//25456834//24981863//22608085
chr6:84234310-84234311(+) m6A CDS       22608085
chr6:84234407-84234408(+) m6A 3'UTR       24981863//22608085
chr6:84234414-84234415(+) m6A 3'UTR       24981863//22608085
chr6:84234447-84234448(+) m6A 3'UTR       24981863//22608085
chr6:84234494-84234495(+) m6A 3'UTR       24981863//22608085
chr6:84234500-84234501(+) m6A 3'UTR       25456834//24981863//22608085
chr6:84234581-84234582(+) m6A 3'UTR       25456834//22608085
chr6:84234675-84234676(+) m6A 3'UTR       22608085
chr6:84234686-84234687(+) m6A 3'UTR       22608085
chr6:84234694-84234695(+) m6A 3'UTR       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PRSS35
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART18-5p
Interactor2: PRSS35

Evidence Support:


Prediction-Evidence cRep//miRanda
Support Database RepTar//VmiReg

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