Detail Information

Basic Information:


  VIRBase ID:  

VHID00375078

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.9523

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART18-5p:           KIF3B:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART18-5p KIF3B
miRBase
Accession/Entrez ID
MIMAT0003717 9371
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - FLA8//HH0048//KLP-11//RP89

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KIF3B
chr20:30913267(+) A-I      intronic
chr20:30921240(+) A-I      3'UTR
chr20:30921282(+) A-I      3'UTR
chr20:30921381(+) A-I      3'UTR
chr20:30911630(+) A-I      intronic
chr20:30906864(+) A-I      intronic
chr20:30913258(+) A-I      intronic
chr20:30911837(+) A-I      intronic
chr20:30911832(+) A-I      intronic
chr20:30906850(+) A-I      intronic
chr20:30906789(+) A-I      intronic
chr20:30881338(+) A-I      intronic
chr20:30881306(+) A-I      intronic
chr20:30921226(+) A-I      3'UTR
chr20:30906785(+) A-I      intronic
chr20:30896168(+) A-I      intronic
chr20:30866988(+) A-I      intronic
chr20:30868262(+) A-I      intronic
chr20:30868285(+) A-I      intronic
chr20:30871542(+) A-I      intronic
chr20:30870862(+) A-I      intronic
chr20:30870976(+) A-I      intronic
chr20:30871411(+) A-I      intronic
chr20:30871515(+) A-I      intronic
chr20:30871534(+) A-I      intronic
chr20:30871563(+) A-I      intronic
chr20:30871671(+) A-I      intronic
chr20:30871697(+) A-I      intronic
chr20:30871831(+) A-I      intronic
chr20:30872022(+) A-I      intronic
chr20:30866750(+) A-I      intronic
chr20:30872320(+) A-I      intronic
chr20:30894456(+) A-I      intronic
chr20:30895908(+) A-I      intronic
chr20:30895900(+) A-I      intronic
chr20:30895515(+) A-I      intronic
chr20:30894658(+) A-I      intronic
chr20:30894581(+) A-I      intronic
chr20:30894572(+) A-I      intronic
chr20:30895918(+) A-I      intronic
chr20:30895928(+) A-I      intronic
chr20:30895945(+) A-I      intronic
chr20:30895988(+) A-I      intronic
chr20:30895996(+) A-I      intronic
chr20:30911882(+) A-I      intronic
chr20:30896838(+) A-I      intronic
chr20:30896839(+) A-I      intronic
chr20:30900001(+) A-I      intronic
chr20:30900007(+) A-I      intronic
chr20:30900091(+) A-I      intronic
chr20:30901590(+) A-I      intronic
chr20:30901779(+) A-I      intronic
chr20:30902196(+) A-I      intronic
chr20:30902212(+) A-I      intronic
chr20:30903307(+) A-I      intronic
chr20:30905664(+) A-I      intronic
chr20:30906025(+) A-I      intronic
chr20:30906838(+) A-I      intronic
chr20:30906930(+) A-I      intronic
chr20:30879536(+) A-I      intronic
chr20:30879560(+) A-I      intronic
chr20:30879609(+) A-I      intronic
chr20:30894433(+) A-I      intronic
chr20:30894149(+) A-I      intronic
chr20:30910198(+) A-I      intronic
chr20:30894101(+) A-I      intronic
chr20:30892876(+) A-I      intronic
chr20:30879620(+) A-I      intronic
chr20:30879659(+) A-I      intronic
chr20:30879682(+) A-I      intronic
chr20:30879703(+) A-I      intronic
chr20:30879884(+) A-I      intronic
chr20:30910249(+) A-I      intronic
chr20:30910318(+) A-I      intronic
chr20:30911302(+) A-I      intronic
chr20:30911453(+) A-I      intronic
chr20:30911592(+) A-I      intronic
chr20:30911601(+) A-I      intronic
chr20:30911853(+) A-I      intronic
chr20:30911861(+) A-I      intronic
chr20:30911867(+) A-I      intronic
chr20:30911872(+) A-I      intronic
chr20:30912585(+) A-I      intronic
chr20:30912608(+) A-I      intronic
chr20:30912630(+) A-I      intronic
chr20:30913072(+) A-I      intronic
chr20:30913091(+) A-I      intronic
chr20:30913092(+) A-I      intronic
chr20:30913102(+) A-I      intronic
chr20:30913117(+) A-I      intronic
chr20:30913202(+) A-I      intronic
chr20:30913227(+) A-I      intronic
chr20:30913526(+) A-I      intronic
chr20:30913660(+) A-I      intronic
chr20:30915705(+) A-I      intronic
chr20:30916985(+) A-I      intronic
chr20:30916991(+) A-I      intronic
chr20:30879915(+) A-I      intronic
chr20:30879925(+) A-I      intronic
chr20:30880331(+) A-I      intronic
chr20:30881176(+) A-I      intronic
chr20:30881358(+) A-I      intronic
chr20:30883151(+) A-I      intronic
chr20:30883165(+) A-I      intronic
chr20:30883223(+) A-I      intronic
chr20:30878141(+) A-I      intronic
chr20:30878689(+) A-I      intronic
chr20:30878024(+) A-I      intronic
chr20:30879522(+) A-I      intronic
chr20:30879523(+) A-I      intronic
chr20:30883729(+) A-I      intronic
chr20:30883737(+) A-I      intronic
chr20:30883748(+) A-I      intronic
chr20:30883834(+) A-I      intronic
chr20:30883940(+) A-I      intronic
chr20:30884181(+) A-I      intronic
chr20:30868306(+) A-I      intronic
chr20:30892804(+) A-I      intronic
chr20:30889129(+) A-I      intronic
chr20:30888006(+) A-I      intronic
chr20:30887964(+) A-I      intronic
chr20:30887709(+) A-I      intronic
chr20:30887695(+) A-I      intronic
chr20:30887677(+) A-I      intronic
chr20:30887671(+) A-I      intronic
chr20:30886074(+) A-I      intronic
chr20:30884351(+) A-I      intronic
chr20:30884292(+) A-I      intronic
chr20:30878010(+) A-I      intronic
chr20:30877136(+) A-I      intronic
chr20:30877059(+) A-I      intronic
chr20:30876156(+) A-I      intronic
chr20:30876121(+) A-I      intronic
chr20:30875786(+) A-I      intronic
chr20:30875755(+) A-I      intronic
chr20:30875401(+) A-I      intronic
chr20:30875039(+) A-I      intronic
chr20:30872372(+) A-I      intronic
chr20:30872358(+) A-I      intronic
chr20:30866796(+) A-I      intronic
chr20:30866801(+) A-I      intronic
chr20:30921237(+) A-I      3'UTR
chr20:30921252(+) A-I      3'UTR
chr20:30921249(+) A-I      3'UTR
chr20:30921250(+) A-I      3'UTR
chr20:30921276(+) A-I      3'UTR
chr20:30913494(+) A-I      intronic
chr20:30905679(+) A-I      intronic
chr20:30878419(+) A-I      intronic
chr20:30911561(+) A-I      intronic
chr20:30878575(+) A-I      intronic
chr20:30878418(+) A-I      intronic
chr20:30877202(+) A-I      intronic
chr20:30911303(+) A-I      intronic
chr20:30916850(+) A-I      intronic
chr20:30913109(+) A-I      intronic
chr20:30912755(+) A-I      intronic
chr20:30884242(+) A-I      intronic
chr20:30869368(+) A-I      intronic
chr20:30913637(+) A-I      intronic
chr20:30900034(+) A-I      intronic
chr20:30878577(+) A-I      intronic
chr20:30912667(+) A-I      intronic
chr20:30883865(+) A-I      intronic
chr20:30896127(+) A-I      intronic
chr20:30872382(+) A-I      intronic
chr20:30883225(+) A-I      intronic
chr20:30894498(+) A-I      intronic
chr20:30916366(+) A-I      intronic
chr20:30906876(+) A-I      intronic
chr20:30909111(+) A-I      intronic
chr20:30879694(+) A-I      intronic
chr20:30916856(+) A-I      intronic
chr20:30900128(+) A-I      intronic
chr20:30878441(+) A-I      intronic
chr20:30871187(+) A-I      intronic
chr20:30878467(+) A-I      intronic
chr20:30887929(+) A-I      intronic
chr20:30878066(+) A-I      intronic
chr20:30878473(+) A-I      intronic
chr20:30896004(+) A-I      intronic
chr20:30878039(+) A-I      intronic
chr20:30880547(+) A-I      intronic
chr20:30878627(+) A-I      intronic
chr20:30878561(+) A-I      intronic
chr20:30880450(+) A-I      intronic
chr20:30894540(+) A-I      intronic
chr20:30871735(+) A-I      intronic
chr20:30906999(+) A-I      intronic
chr20:30886696(+) A-I      intronic
chr20:30876037(+) A-I      intronic
chr20:30868268(+) A-I      intronic
chr20:30900041(+) A-I      intronic
chr20:30869470(+) A-I      intronic
chr20:30893044(+) A-I      intronic
chr20:30911609(+) A-I      intronic
chr20:30913085(+) A-I      intronic
chr20:30878576(+) A-I      intronic
chr20:30878492(+) A-I      intronic
chr20:30870906(+) A-I      intronic
chr20:30913131(+) A-I      intronic
chr20:30872359(+) A-I      intronic
chr20:30875386(+) A-I      intronic
chr20:30911677(+) A-I      intronic
chr20:30913133(+) A-I      intronic
chr20:30871053(+) A-I      intronic
chr20:30885653(+) A-I      intronic
chr20:30901542(+) A-I      intronic
chr20:30913236(+) A-I      intronic
chr20:30897159(+) A-I      intronic
chr20:30915854(+) A-I      intronic
chr20:30876036(+) A-I      intronic
chr20:30907878(+) A-I      intronic
chr20:30881146(+) A-I      intronic
chr20:30868334(+) A-I      intronic
chr20:30878578(+) A-I      intronic
chr20:30905958(+) A-I      intronic
chr20:30878543(+) A-I      intronic
chr20:30896953(+) A-I      intronic
chr20:30921277(+) A-I      3'UTR
chr20:30921357(+) A-I      3'UTR
chr20:30921286(+) A-I      3'UTR
chr20:30921274(+) A-I      3'UTR
chr20:30921351(+) A-I      3'UTR
chr20:30921390(+) A-I      3'UTR
chr20:30921180(+) A-I      3'UTR
chr20:30921189(+) A-I      3'UTR
chr20:30921258(+) A-I      3'UTR
chr20:30921265(+) A-I      3'UTR
chr20:30921234(+) A-I      3'UTR
chr20:30921391(+) A-I      3'UTR
chr20:30921285(+) A-I      3'UTR
chr20:30921283(+) A-I      3'UTR
chr20:30921315(+) A-I      3'UTR
chr20:30921325(+) A-I      3'UTR
chr20:30921364(+) A-I      3'UTR
chr20:30921321(+) A-I      3'UTR
chr20:30921348(+) A-I      3'UTR
chr20:30921278(+) A-I      3'UTR
chr20:30909153(+) A-I      intronic
chr20:30911534(+) A-I      intronic
chr20:30905654(+) A-I      intronic
chr20:30906947(+) A-I      intronic
chr20:30903302(+) A-I      intronic
chr20:30894079(+) A-I      intronic
chr20:30911342(+) A-I      intronic
chr20:30878121(+) A-I      intronic
chr20:30913053(+) A-I      intronic
chr20:30871858(+) A-I      intronic
chr20:30905653(+) A-I      intronic
chr20:30880802(+) A-I      intronic
chr20:30894515(+) A-I      intronic
chr20:30877944(+) A-I      intronic
chr20:30869429(+) A-I      intronic
chr20:30880440(+) A-I      intronic
chr20:30893042(+) A-I      intronic
chr20:30895575(+) A-I      intronic
chr20:30876225(+) A-I      intronic
chr20:30901746(+) A-I      intronic
chr20:30903395(+) A-I      intronic
chr20:30906844(+) A-I      intronic
chr20:30880258(+) A-I      intronic
chr20:30912687(+) A-I      intronic
chr20:30911591(+) A-I      intronic
chr20:30878149(+) A-I      intronic
chr20:30907041(+) A-I      intronic
chr20:30872337(+) A-I      intronic
chr20:30911791(+) A-I      intronic
chr20:30880221(+) A-I      intronic
chr20:30879839(+) A-I      intronic
chr20:30880967(+) A-I      intronic
chr20:30866994(+) A-I      intronic
chr20:30911809(+) A-I      intronic
chr20:30903306(+) A-I      intronic
chr20:30881328(+) A-I      intronic
chr20:30894185(+) A-I      intronic
chr20:30869464(+) A-I      intronic
chr20:30905464(+) A-I      intronic
chr20:30910250(+) A-I      intronic
chr20:30911520(+) A-I      intronic
chr20:30880190(+) A-I      intronic
chr20:30907038(+) A-I      intronic
chr20:30877926(+) A-I      intronic
chr20:30886650(+) A-I      intronic
chr20:30916161(+) A-I      intronic
chr20:30906984(+) A-I      intronic
chr20:30911427(+) A-I      intronic
chr20:30917029(+) A-I      intronic
chr20:30867541(+) A-I      intronic
chr20:30913165(+) A-I      intronic
chr20:30901773(+) A-I      intronic
chr20:30875398(+) A-I      intronic
chr20:30906893(+) A-I      intronic
chr20:30888485(+) A-I      intronic
chr20:30871698(+) A-I      intronic
chr20:30880504(+) A-I      intronic
chr20:30866856(+) A-I      intronic
chr20:30879952(+) A-I      intronic
chr20:30893447(+) A-I      intronic
chr20:30911602(+) A-I      intronic
chr20:30904888(+) A-I      intronic
chr20:30884204(+) A-I      intronic
chr20:30881400(+) A-I      intronic
chr20:30911277(+) A-I      intronic
chr20:30881292(+) A-I      intronic
chr20:30901772(+) A-I      intronic
chr20:30900025(+) A-I      intronic
chr20:30911235(+) A-I      intronic
chr20:30906833(+) A-I      intronic
chr20:30880882(+) A-I      intronic
chr20:30913680(+) A-I      intronic
chr20:30904889(+) A-I      intronic
chr20:30893460(+) A-I      intronic
chr20:30896523(+) A-I      intronic
chr20:30871845(+) A-I      intronic
chr20:30911227(+) A-I      intronic
chr20:30888289(+) A-I      intronic
chr20:30868340(+) A-I      intronic
chr20:30908452(+) A-I      intronic
chr20:30904887(+) A-I      intronic
chr20:30894501(+) A-I      intronic
chr20:30878065(+) A-I      intronic
chr20:30899970(+) A-I      intronic
chr20:30881002(+) A-I      intronic
chr20:30917222(+) A-I      intronic
chr20:30900009(+) A-I      intronic
chr20:30881323(+) A-I      intronic
chr20:30880355(+) A-I      intronic
chr20:30879519(+) A-I      intronic
chr20:30877098(+) A-I      intronic
chr20:30879681(+) A-I      intronic
chr20:30884353(+) A-I      intronic
chr20:30908346(+) A-I      intronic
chr20:30913015(+) A-I      intronic
chr20:30896694(+) A-I      intronic
chr20:30875194(+) A-I      intronic
chr20:30905985(+) A-I      intronic
chr20:30903251(+) A-I      intronic
chr20:30911426(+) A-I      intronic
chr20:30886507(+) A-I      intronic
chr20:30886038(+) A-I      intronic
chr20:30871860(+) A-I      intronic
chr20:30913158(+) A-I      intronic
chr20:30894670(+) A-I      intronic
chr20:30867532(+) A-I      intronic
chr20:30871956(+) A-I      intronic
chr20:30912764(+) A-I      intronic
chr20:30888210(+) A-I      intronic
chr20:30880982(+) A-I      intronic
chr20:30905580(+) A-I      intronic
chr20:30912713(+) A-I      intronic
chr20:30881231(+) A-I      intronic
chr20:30913519(+) A-I      intronic
chr20:30883295(+) A-I      intronic
chr20:30871853(+) A-I      intronic
chr20:30895599(+) A-I      intronic
chr20:30901739(+) A-I      intronic
chr20:30880424(+) A-I      intronic
chr20:30884283(+) A-I      intronic
chr20:30866866(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED KIF3B
chr20:30919183(+) A-I exon 3'UTR    15342557
chr20:30921186(+) A-I exon 3'UTR    15342557
chr20:30921234(+) A-I exon 3'UTR    15342557
chr20:30921258(+) A-I exon 3'UTR    15342557
chr20:30921265(+) A-I exon 3'UTR    15342557
chr20:30921278(+) A-I exon 3'UTR    15342557
chr20:30921280(+) A-I exon 3'UTR    15342557
chr20:30921285(+) A-I exon 3'UTR    15342557
chr20:30921286(+) A-I exon 3'UTR    15342557
chr20:30921321(+) A-I exon 3'UTR    15342557
chr20:30921351(+) A-I exon 3'UTR    15342557
chr20:30921356(+) A-I exon 3'UTR    15342557
chr20:30921357(+) A-I exon 3'UTR    15342557
chr20:30878418(+) A-I intron -    22028664
chr20:30878419(+) A-I intron -    22028664
chr20:30878440(+) A-I intron -    22028664
chr20:30878441(+) A-I intron -    22028664
chr20:30878467(+) A-I intron -    22028664
chr20:30878473(+) A-I intron -    22028664
chr20:30878492(+) A-I intron -    22028664
chr20:30878543(+) A-I intron -    22028664
chr20:30878561(+) A-I intron -    22028664
chr20:30878575(+) A-I intron -    22028664
chr20:30878576(+) A-I intron -    22028664
chr20:30878577(+) A-I intron -    22028664
chr20:30878578(+) A-I intron -    22028664
chr20:30878627(+) A-I intron -    22028664
chr20:30921315(+) A-I intron -    21960545
chr20:30880440(+) A-G intron -    22484847
chr20:30886711(+) A-G intron -    22484847
chr20:30904961(+) A-G intron -    22484847
chr20:30911427(+) A-G intron -    22484847
chr20:30912711(+) A-G intron -    22484847
chr20:30912713(+) A-G intron -    22484847
chr20:30921235(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KIF3B
chr20:30897532-30897533(+) m6A 5'UTR       24284625
chr20:30897713-30897714(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr20:30897745-30897746(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:30897792-30897793(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:30897850-30897851(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:30897867-30897868(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:30897877-30897878(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:30897886-30897887(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr20:30898060-30898061(+) m6A CDS       24284625//24209618//24981863//26404942//22608085
chr20:30898112-30898113(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr20:30898172-30898173(+) m6A CDS       24284625//24209618//24981863//22608085
chr20:30898178-30898179(+) m6A CDS       24284625//24209618//24981863//22608085
chr20:30898280-30898281(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr20:30898304-30898305(+) m6A CDS       24284625//24209618//24981863//22575960//22608085
chr20:30898342-30898343(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085
chr20:30898460-30898461(+) m6A CDS       24284625//24209618//24981863//26404942//22575960//22608085
chr20:30898510-30898511(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:30898558-30898559(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:30898595-30898596(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:30898604-30898605(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:30898625-30898626(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:30898827-30898828(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085
chr20:30898839-30898840(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085
chr20:30898934-30898935(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22608085
chr20:30904076-30904077(+) m6A CDS       24209618//24981863//22608085
chr20:30904380-30904381(+) m6A CDS       24981863
chr20:30904388-30904389(+) m6A CDS       24981863
chr20:30904398-30904399(+) m6A CDS       24981863
chr20:30904426-30904427(+) m6A CDS       24981863
chr20:30904434-30904435(+) m6A CDS       24981863
chr20:30904442-30904443(+) m6A CDS       24981863
chr20:30904611-30904612(+) m6A CDS       24981863
chr20:30904642-30904643(+) m6A CDS       24981863
chr20:30904671-30904672(+) m6A CDS       24981863
chr20:30914590-30914591(+) m6A CDS       24981863
chr20:30914681-30914682(+) m6A CDS       24981863
chr20:30915360-30915361(+) m6A CDS       24981863
chr20:30915406-30915407(+) m6A CDS       24981863
chr20:30917950-30917951(+) m6A CDS       24981863//22608085
chr20:30917971-30917972(+) m6A CDS       24284625//24981863//22608085
chr20:30917985-30917986(+) m6A CDS       24284625//24981863//22608085
chr20:30917995-30917996(+) m6A CDS       24284625//24981863//22608085
chr20:30919071-30919072(+) m6A CDS       24284625//24981863//22608085
chr20:30919150-30919151(+) m6A 3'UTR       24284625//25456834//24981863//26404942//22608085
chr20:30919176-30919177(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22608085
chr20:30919210-30919211(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22608085
chr20:30919217-30919218(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22608085
chr20:30919316-30919317(+) m6A 3'UTR       24284625//24981863//22608085
chr20:30919505-30919506(+) m6A 3'UTR       24284625//24981863
chr20:30919539-30919540(+) m6A 3'UTR       24284625//24981863
chr20:30919591-30919592(+) m6A 3'UTR       24284625//24981863
chr20:30919599-30919600(+) m6A 3'UTR       24284625//24981863
chr20:30919723-30919724(+) m6A 3'UTR       -
chr20:30920057-30920058(+) m6A 3'UTR       24284625
chr20:30920080-30920081(+) Y 3'UTR       26075521
chr20:30920163-30920164(+) m6A 3'UTR       24284625//22608085
chr20:30920170-30920171(+) m6A 3'UTR       24284625//22608085
chr20:30920193-30920194(+) m6A 3'UTR       24284625//24981863//22608085
chr20:30920199-30920200(+) Cm 3'UTR       -
chr20:30920256-30920257(+) m6A 3'UTR       24981863//22608085
chr20:30921140-30921141(+) m6A 3'UTR       24981863//22608085
chr20:30921212-30921213(+) m6A 3'UTR       24981863//22608085
chr20:30921228-30921229(+) m6A 3'UTR       24981863//22608085
chr20:30921236-30921237(+) m6A 3'UTR       24981863//22608085
chr20:30921259-30921260(+) m6A 3'UTR       24981863//22608085
chr20:30921356-30921357(+) m6A 3'UTR       24284625//22608085
chr20:30921425-30921426(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr20:30921460-30921461(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr20:30921481-30921482(+) m6A 3'UTR       24284625//24981863//27773535//22608085
chr20:30921559-30921560(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085
chr20:30921575-30921576(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085
chr20:30921644-30921645(+) m6A 3'UTR       24284625//24209618//24981863//22608085
chr20:30921799-30921800(+) Y 3'UTR       26075521
chr20:30921805-30921806(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960//22608085
chr20:30921826-30921827(+) m6A 3'UTR       24284625//24209618//24981863//26404942//22575960//22608085
chr20:30921960-30921961(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr20:30921983-30921984(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085
chr20:30922048-30922049(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085
chr20:30922063-30922064(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22608085
chr20:30922104-30922105(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22608085
chr20:30922362-30922363(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:30922374-30922375(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:30922383-30922384(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr20:30922452-30922453(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate KIF3B
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART18-5p
Interactor2: KIF3B

Evidence Support:


Strong-Evidence RT-PCR//Western blot
Weak-Evidence Microarray
Prediction-Evidence cRep//miRanda//Targetscan
Support Database RepTar//VIRmiRNA//VmiReg

References:


PMID 25012295 Target region 3'UTR
Source RepTar//VIRmiRNA//VmiReg Interactor1 expression None
Tissue or cell line BL2 cells//BJAB cells Interactor2 expression None
Description BART 18-5p is one of the miRNAs that are abundantly expressed in latently infected resting memory B cells in vivo, with 300 copies per cell. Because EBV does not express any proteins in latently infected memory B cells, high levels of 18-5p expression may suggest a role for this miRNA in maintenance of viral latency. In this paper, we report on the identification of a target gene for 18-5p that implicates it in maintaining latency by suppressing viral replication.

Starting a new search, please wait ...