Basic Information:

  VIRBase ID:  

VHID00373793

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART17-3p:  MIMAT0003716          AMER3:  NM_001105195     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART17-3p	AMER3
miRBase Accession/Entrez ID	MIMAT0003716	205147
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FAM123C

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AMER3	chr2:131515816(+) A-I      intronic chr2:131524254(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AMER3	chr2:131519862-131519863(+) m6A CDS       - chr2:131519875-131519876(+) m6A CDS       - chr2:131519905-131519906(+) m6A CDS       - chr2:131519924-131519925(+) m6A CDS       - chr2:131520129-131520130(+) m6A CDS       - chr2:131520150-131520151(+) m6A CDS       - chr2:131520155-131520156(+) m6A CDS       - chr2:131520162-131520163(+) m6A CDS       - chr2:131520210-131520211(+) m6A CDS       - chr2:131520219-131520220(+) m6A CDS       - chr2:131520291-131520292(+) m6A CDS       - chr2:131520300-131520301(+) m6A CDS       - chr2:131520576-131520577(+) m6A CDS       - chr2:131520647-131520648(+) m6A CDS       22575960 chr2:131520657-131520658(+) m6A CDS       22575960 chr2:131520672-131520673(+) m6A CDS       22575960 chr2:131520714-131520715(+) m6A CDS       22575960 chr2:131520826-131520827(+) m6A CDS       - chr2:131520837-131520838(+) m6A CDS       - chr2:131520888-131520889(+) m6A CDS       - chr2:131521418-131521419(+) m6A CDS       - chr2:131521457-131521458(+) m6A CDS       - chr2:131521711-131521712(+) m6A CDS       - chr2:131521743-131521744(+) m6A CDS       25456834 chr2:131521804-131521805(+) m6A CDS       25456834 chr2:131521869-131521870(+) m6A CDS       - chr2:131521896-131521897(+) m6A CDS       - chr2:131521959-131521960(+) m6A CDS       - chr2:131522019-131522020(+) m6A CDS       - chr2:131522097-131522098(+) m6A CDS       - chr2:131522232-131522233(+) m6A 3'UTR       - chr2:131522253-131522254(+) m6A 3'UTR       - chr2:131522293-131522294(+) m6A 3'UTR       - chr2:131522327-131522328(+) m6A 3'UTR       - chr2:131522354-131522355(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AMER3	Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART17-3p
Interactor2: AMER3

Evidence Support:

Prediction-Evidence	cRep//PITA
Support Database	RepTar//VmiReg