Basic Information:

  VIRBase ID:  

VHID00373659

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART17-3p:  MIMAT0003716          PRIMA1:  NM_178013     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART17-3p	PRIMA1
miRBase Accession/Entrez ID	MIMAT0003716	145270
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PRIMA

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PRIMA1	chr14:94224869(-) A-I      intronic chr14:94243791(-) A-I      intronic chr14:94191495(-) A-I      intronic chr14:94193785(-) A-I      intronic chr14:94243820(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PRIMA1	chr14:94186976-94186977(-) m6A 3'UTR       25456834//24981863 chr14:94187004-94187005(-) m6A 3'UTR       25456834//24981863 chr14:94187058-94187059(-) m6A 3'UTR       25456834//24981863 chr14:94187122-94187123(-) m6A 3'UTR       25456834//24981863 chr14:94187595-94187596(-) m6A 3'UTR       25456834//24981863//27773536 chr14:94187649-94187650(-) m6A 3'UTR       25456834//24981863 chr14:94187689-94187690(-) m6A 3'UTR       25456834//24981863//22608085 chr14:94187717-94187718(-) m6A 3'UTR       25456834//24981863//22608085 chr14:94187735-94187736(-) m6A 3'UTR       25456834//24981863//22608085 chr14:94187756-94187757(-) m6A 3'UTR       25456834//24981863//22608085 chr14:94187773-94187774(-) m6A 3'UTR       25456834//24981863//22608085 chr14:94187805-94187806(-) m6A 3'UTR//CDS       25456834//24981863//22608085 chr14:94187888-94187889(-) m6A 3'UTR//CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PRIMA1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART17-3p
Interactor2: PRIMA1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg