Basic Information:

  VIRBase ID:  

VHID00373099

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART17-3p:  MIMAT0003716          MRPS14:  NM_022100     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART17-3p	MRPS14
miRBase Accession/Entrez ID	MIMAT0003716	63931
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	COXPD38//DJ262D12.2//HSMRPS14//MRP-S14//S14mt

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MRPS14	chr1:174987179(-) A-I      intronic chr1:174981157(-) A-I      intronic chr1:174981092(-) A-I      intronic chr1:174981258(-) A-I      intronic chr1:174986364(-) A-I      intronic chr1:174981096(-) A-I      intronic chr1:174986355(-) A-I      intronic chr1:174987017(-) A-I      intronic chr1:174981022(-) A-I      intronic chr1:174981116(-) A-I      intronic chr1:174986302(-) A-I      intronic chr1:174981076(-) A-I      intronic chr1:174986269(-) A-I      intronic chr1:174984349(-) A-I      intronic chr1:174987184(-) A-I      intronic chr1:174986328(-) A-I      intronic chr1:174986288(-) A-I      intronic chr1:174986323(-) A-I      intronic chr1:174986233(-) A-I      intronic chr1:174986221(-) A-I      intronic chr1:174987088(-) A-I      intronic chr1:174986463(-) A-I      intronic chr1:174987178(-) A-I      intronic chr1:174985211(-) A-I      intronic chr1:174986319(-) A-I      intronic chr1:174986368(-) A-I      intronic chr1:174987036(-) A-I      intronic chr1:174986276(-) A-I      intronic chr1:174986379(-) A-I      intronic chr1:174987112(-) A-I      intronic chr1:174981210(-) A-I      intronic chr1:174986424(-) A-I      intronic chr1:174986245(-) A-I      intronic chr1:174981067(-) A-I      intronic chr1:174984278(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MRPS14	chr1:174984092(-) T-C intron -    22484847 chr1:174984140(-) T-C intron -    22484847 chr1:174985211(-) A-G intron -    22484847 chr1:174985343(-) T-G intron -    22484847 chr1:174985344(-) G-T intron -    22484847 chr1:174986221(-) A-G intron -    22484847 chr1:174986245(-) A-G intron -    22484847 chr1:174986276(-) A-G intron -    22484847 chr1:174986288(-) A-G intron -    22484847 chr1:174986319(-) A-G intron -    22484847 chr1:174986424(-) A-G intron -    22484847 chr1:174986444(-) T-C intron -    22484847 chr1:174987088(-) A-G intron -    22484847 chr1:174987112(-) A-G intron -    22484847 chr1:174987142(-) G-A intron -    22484847 chr1:174987178(-) A-G intron -    22484847 chr1:174987184(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MRPS14	chr1:174982446-174982447(-) m6A 3'UTR//intron       24981863//27773535 chr1:174982461-174982462(-) m6A 3'UTR//intron       24981863//27773535//22608085 chr1:174982577-174982578(-) m6A 3'UTR//intron       24981863//27773535//22608085 chr1:174982586-174982587(-) m6A 3'UTR//intron       24981863//27773535//22608085 chr1:174982624-174982625(-) m6A 3'UTR//intron       24981863//27773535//22608085 chr1:174982656-174982657(-) m6A 3'UTR//intron       24981863//27773535//22608085 chr1:174982705-174982706(-) m6A 3'UTR//intron       27773535//22608085 chr1:174982821-174982822(-) m6A 3'UTR//intron       27773535 chr1:174982870-174982871(-) m6A 3'UTR//intron       27773535 chr1:174982910-174982911(-) m6A 3'UTR//intron       24981863//27773535 chr1:174982952-174982953(-) m6A 3'UTR//intron       24981863//27773535 chr1:174983004-174983005(-) m6A 3'UTR//intron       24981863//27773535 chr1:174983596-174983597(-) m6A 3'UTR//intron       24981863//22608085 chr1:174983605-174983606(-) m6A 3'UTR//intron       24981863//22608085 chr1:174983647-174983648(-) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:174983665-174983666(-) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:174983723-174983724(-) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:174983728-174983729(-) m6A 3'UTR//intron       24284625//24981863//22608085 chr1:174983791-174983792(-) m6A 3'UTR//intron       24981863 chr1:174987665-174987666(-) m6A 3'UTR//CDS       - chr1:174992548-174992549(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MRPS14	Chromatin K562 cells     - Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART17-3p
Interactor2: MRPS14

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg