Detail Information

Basic Information:


  VIRBase ID:  

VHID00371766

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART17-3p:           OPCML:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART17-3p OPCML
miRBase
Accession/Entrez ID		 MIMAT0003716 4978
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - IGLON1//OBCAM//OPCM

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR OPCML
chr11:132564298(-) A-I      intronic
chr11:132564342(-) A-I      intronic
chr11:132564312(-) A-I      intronic
chr11:132564313(-) A-I      intronic
chr11:132564316(-) A-I      intronic
chr11:132564276(-) A-I      intronic
chr11:132564317(-) A-I      intronic
chr11:132564321(-) A-I      intronic
chr11:132564334(-) A-I      intronic
chr11:132519703(-) A-I      intronic
chr11:132519711(-) A-I      intronic
chr11:132564297(-) A-I      intronic
chr11:132972475(-) A-I      intronic
chr11:132970989(-) A-I      intronic
chr11:132970925(-) A-I      intronic
chr11:133310182(-) A-I      intronic
chr11:132804791(-) A-I      intronic
chr11:133309527(-) A-I      intronic
chr11:132793823(-) A-I      intronic
chr11:132804902(-) A-I      intronic
chr11:132793731(-) A-I      intronic
chr11:132970948(-) A-I      intronic
chr11:132970935(-) A-I      intronic
chr11:132970916(-) A-I      intronic
chr11:133157282(-) A-I      intronic
chr11:132970912(-) A-I      intronic
chr11:132792733(-) A-I      intronic
chr11:132835495(-) A-I      intronic
chr11:133309392(-) A-I      intronic
chr11:133309519(-) A-I      intronic
chr11:132575229(-) A-I      intronic
chr11:132970964(-) A-I      intronic
chr11:132793770(-) A-I      intronic
chr11:132745562(-) A-I      intronic
chr11:132970882(-) A-I      intronic
chr11:132895797(-) A-I      intronic
chr11:132777334(-) A-I      intronic
chr11:132969416(-) A-I      intronic
chr11:132970971(-) A-I      intronic
chr11:132970931(-) A-I      intronic
chr11:132970958(-) A-I      intronic
chr11:133164681(-) A-I      intronic
chr11:132970995(-) A-I      intronic
chr11:133369905(-) A-I      intronic
chr11:132711661(-) A-I      intronic
chr11:133310109(-) A-I      intronic
chr11:132970987(-) A-I      intronic
chr11:132745471(-) A-I      intronic
chr11:132909757(-) A-I      intronic
chr11:133369895(-) A-I      intronic
chr11:133309613(-) A-I      intronic
chr11:132970988(-) A-I      intronic
chr11:133309435(-) A-I      intronic
chr11:132793865(-) A-I      intronic
chr11:132970892(-) A-I      intronic
chr11:132745524(-) A-I      intronic
chr11:132909902(-) A-I      intronic
chr11:133327312(-) A-I      intronic
chr11:132538927(-) A-I      intronic
chr11:132668094(-) A-I      intronic
chr11:132775194(-) A-I      intronic
chr11:132895745(-) A-I      intronic
chr11:132867785(-) A-I      intronic
chr11:132519772(-) A-I      intronic
chr11:132291942(-) A-I      intronic
chr11:132971060(-) A-I      intronic
chr11:132519764(-) A-I      intronic
chr11:132488315(-) A-I      intronic
chr11:132680474(-) A-I      intronic
chr11:132745488(-) A-I      intronic
chr11:132793930(-) A-I      intronic
chr11:132793787(-) A-I      intronic
chr11:132767853(-) A-I      intronic
chr11:132488281(-) A-I      intronic
chr11:132519757(-) A-I      intronic
chr11:133123480(-) A-I      intronic
chr11:132745538(-) A-I      intronic
chr11:132747888(-) A-I      intronic
chr11:132731667(-) A-I      intronic
chr11:133164714(-) A-I      intronic
chr11:132367248(-) A-I      intronic
chr11:132971013(-) A-I      intronic
chr11:133310102(-) A-I      intronic
chr11:132794310(-) A-I      intronic
chr11:133012888(-) A-I      intronic
chr11:132936645(-) A-I      intronic
chr11:132645953(-) A-I      intronic
chr11:132519866(-) A-I      intronic
chr11:132986134(-) A-I      intronic
chr11:133260246(-) A-I      intronic
chr11:132766817(-) A-I      intronic
chr11:133119178(-) A-I      intronic
chr11:133064378(-) A-I      intronic
chr11:132518928(-) A-I      intronic
chr11:132518937(-) A-I      intronic
chr11:132713154(-) A-I      intronic
chr11:132567734(-) A-I      intronic
chr11:132519924(-) A-I      intronic
chr11:132391531(-) A-I      intronic
chr11:133260311(-) A-I      intronic
chr11:132792909(-) A-I      intronic
chr11:133157257(-) A-I      intronic
chr11:132952834(-) A-I      intronic
chr11:132391495(-) A-I      intronic
chr11:132865883(-) A-I      intronic
chr11:133119164(-) A-I      intronic
chr11:132680016(-) A-I      intronic
chr11:133119136(-) A-I      intronic
chr11:132792711(-) A-I      intronic
chr11:133327932(-) A-I      intronic
chr11:132792874(-) A-I      intronic
chr11:133236994(-) A-I      intronic
chr11:132826854(-) A-I      intronic
chr11:132518922(-) A-I      intronic
chr11:133309501(-) A-I      intronic
chr11:133204822(-) A-I      intronic
chr11:133123499(-) A-I      intronic
chr11:133309634(-) A-I      intronic
chr11:132792750(-) A-I      intronic
chr11:132793804(-) A-I      intronic
chr11:132867770(-) A-I      intronic
chr11:132392877(-) A-I      intronic
chr11:132793852(-) A-I      intronic
chr11:132972454(-) A-I      intronic
chr11:132969286(-) A-I      intronic
chr11:132367115(-) A-I      intronic
chr11:132519879(-) A-I      intronic
chr11:132359716(-) A-I      intronic
chr11:133309439(-) A-I      intronic
chr11:132804778(-) A-I      intronic
chr11:133028354(-) A-I      intronic
chr11:132975713(-) A-I      intronic
chr11:132990661(-) A-I      intronic
chr11:132793813(-) A-I      intronic
chr11:132538931(-) A-I      intronic
chr11:132971097(-) A-I      intronic
chr11:132564367(-) A-I      intronic
chr11:132793755(-) A-I      intronic
chr11:132804864(-) A-I      intronic
chr11:132865877(-) A-I      intronic
chr11:132794296(-) A-I      intronic
chr11:132518901(-) A-I      intronic
chr11:133248703(-) A-I      intronic
chr11:132969417(-) A-I      intronic
chr11:132713057(-) A-I      intronic
chr11:132867776(-) A-I      intronic
chr11:132804872(-) A-I      intronic
chr11:132599909(-) A-I      intronic
chr11:133156156(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED OPCML
chr11:132970882(-) A-I intron -    22028664
chr11:132970892(-) A-I intron -    22028664
chr11:132970912(-) A-I intron -    22028664
chr11:132970916(-) A-I intron -    22028664
chr11:132970925(-) A-I intron -    22028664
chr11:132970931(-) A-I intron -    22028664
chr11:132970935(-) A-I intron -    22028664
chr11:132970948(-) A-I intron -    22028664
chr11:132970958(-) A-I intron -    22028664
chr11:132970964(-) A-I intron -    22028664
chr11:132970971(-) A-I intron -    22028664
chr11:132970987(-) A-I intron -    22028664
chr11:132970988(-) A-I intron -    22028664
chr11:132970989(-) A-I intron -    22028664
chr11:132970995(-) A-I intron -    22028664
chr11:132971013(-) A-I intron -    22028664

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase OPCML
chr11:132287447-132287448(-) m6A 3'UTR       22575960
chr11:132287496-132287497(-) m6A 3'UTR       25456834//22575960
chr11:132287515-132287516(-) m6A 3'UTR       25456834//22575960
chr11:132287524-132287525(-) m6A 3'UTR       25456834//22575960
chr11:132287542-132287543(-) m6A 3'UTR       22575960
chr11:132287555-132287556(-) m6A 3'UTR       22575960
chr11:132288124-132288125(-) m6A 3'UTR       25456834
chr11:132288147-132288148(-) m6A 3'UTR       25456834//24981863
chr11:132288188-132288189(-) m6A 3'UTR       25456834//24981863
chr11:132288210-132288211(-) m6A 3'UTR       25456834//24981863
chr11:132288256-132288257(-) m6A 3'UTR       25456834//24981863
chr11:132288416-132288417(-) m6A 3'UTR       24981863//22575960
chr11:132288560-132288561(-) m6A 3'UTR       24981863
chr11:132288913-132288914(-) m6A 3'UTR       24981863
chr11:132288950-132288951(-) m6A 3'UTR       24981863
chr11:132813029-132813030(-) m6A 5'UTR//intron       25456834
chr11:132813035-132813036(-) m6A 5'UTR//intron       25456834
chr11:132813096-132813097(-) m6A 5'UTR//intron       25456834
chr11:132813130-132813131(-) m6A 5'UTR//intron       25456834
chr11:132813146-132813147(-) m6A 5'UTR//intron       25456834
chr11:132813388-132813389(-) m6A 5'UTR//intron       24981863
chr11:132813415-132813416(-) m6A 5'UTR//intron       24981863
chr11:133230824-133230825(-) m6A intron       25456834
chr11:133230868-133230869(-) m6A intron       25456834
chr11:133230877-133230878(-) m6A intron       25456834
chr11:133230962-133230963(-) m6A intron       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate OPCML
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART17-3p
Interactor2: OPCML

Evidence Support:


Prediction-Evidence cRep//PITA//Targetscan
Support Database RepTar//VmiReg

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