Basic Information:

  VIRBase ID:  

VHID00369159

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART17-5p:  MIMAT0003715          OXR1:  NM_001198535     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART17-5p	OXR1
miRBase Accession/Entrez ID	MIMAT0003715	55074
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CHEGDD//Nbla00307//TLDC3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	OXR1	chr8:107709406(+) A-I      intronic chr8:107709419(+) A-I      intronic chr8:107732777(+) A-I      intronic chr8:107732789(+) A-I      intronic chr8:107304132(+) A-I      intronic chr8:107594144(+) A-I      intronic chr8:107661358(+) A-I      intronic chr8:107736040(+) A-I      intronic chr8:107760932(+) A-I      intronic chr8:107761362(+) A-I      intronic chr8:107761398(+) A-I      intronic chr8:107762584(+) A-I      intronic chr8:107709349(+) A-I      intronic chr8:107709348(+) A-I      intronic chr8:107709347(+) A-I      intronic chr8:107745879(+) A-I      intronic chr8:107542626(+) A-I      intronic chr8:107548435(+) A-I      intronic chr8:107557970(+) A-I      intronic chr8:107600394(+) A-I      intronic chr8:107607530(+) A-I      intronic chr8:107607568(+) A-I      intronic chr8:107607667(+) A-I      intronic chr8:107617794(+) A-I      intronic chr8:107629530(+) A-I      intronic chr8:107629547(+) A-I      intronic chr8:107629579(+) A-I      intronic chr8:107637043(+) A-I      intronic chr8:107637051(+) A-I      intronic chr8:107645405(+) A-I      intronic chr8:107645420(+) A-I      intronic chr8:107645425(+) A-I      intronic chr8:107661310(+) A-I      intronic chr8:107661318(+) A-I      intronic chr8:107661322(+) A-I      intronic chr8:107661326(+) A-I      intronic chr8:107661412(+) A-I      intronic chr8:107699841(+) A-I      intronic chr8:107730880(+) A-I      intronic chr8:107730907(+) A-I      intronic chr8:107730910(+) A-I      intronic chr8:107730913(+) A-I      intronic chr8:107730973(+) A-I      intronic chr8:107730995(+) A-I      intronic chr8:107731016(+) A-I      intronic chr8:107732055(+) A-I      intronic chr8:107732077(+) A-I      intronic chr8:107732216(+) A-I      intronic chr8:107732256(+) A-I      intronic chr8:107732270(+) A-I      intronic chr8:107732273(+) A-I      intronic chr8:107735356(+) A-I      intronic chr8:107735628(+) A-I      intronic chr8:107735708(+) A-I      intronic chr8:107735806(+) A-I      intronic chr8:107735839(+) A-I      intronic chr8:107736087(+) A-I      intronic chr8:107736117(+) A-I      intronic chr8:107736118(+) A-I      intronic chr8:107736248(+) A-I      intronic chr8:107736276(+) A-I      intronic chr8:107745859(+) A-I      intronic chr8:107745962(+) A-I      intronic chr8:107745969(+) A-I      intronic chr8:107745999(+) A-I      intronic chr8:107760923(+) A-I      intronic chr8:107761383(+) A-I      intronic chr8:107761385(+) A-I      intronic chr8:107761387(+) A-I      intronic chr8:107761414(+) A-I      intronic chr8:107761424(+) A-I      intronic chr8:107761460(+) A-I      intronic chr8:107761472(+) A-I      intronic chr8:107761473(+) A-I      intronic chr8:107761526(+) A-I      intronic chr8:107761536(+) A-I      intronic chr8:107762597(+) A-I      intronic chr8:107762610(+) A-I      intronic chr8:107762617(+) A-I      intronic chr8:107762634(+) A-I      intronic chr8:107351602(+) A-I      intronic chr8:107736279(+) A-I      intronic chr8:107760936(+) A-I      intronic chr8:107746298(+) A-I      intronic chr8:107761297(+) A-I      intronic chr8:107761444(+) A-I      intronic chr8:107699827(+) A-I      intronic chr8:107736041(+) A-I      intronic chr8:107760998(+) A-I      intronic chr8:107745975(+) A-I      intronic chr8:107736203(+) A-I      intronic chr8:107735605(+) A-I      intronic chr8:107735727(+) A-I      intronic chr8:107671438(+) A-I      intronic chr8:107736104(+) A-I      intronic chr8:107400924(+) A-I      intronic chr8:107730812(+) A-I      intronic chr8:107745870(+) A-I      intronic chr8:107402183(+) A-I      intronic chr8:107762832(+) A-I      intronic chr8:107402052(+) A-I      intronic chr8:107755699(+) A-I      intronic chr8:107761456(+) A-I      intronic chr8:107351668(+) A-I      intronic chr8:107760853(+) A-I      intronic chr8:107735465(+) A-I      intronic chr8:107441706(+) A-I      intronic chr8:107684520(+) A-I      intronic chr8:107760981(+) A-I      intronic chr8:107735820(+) A-I      intronic chr8:107732133(+) A-I      intronic chr8:107745873(+) A-I      intronic chr8:107746369(+) A-I      intronic chr8:107760938(+) A-I      intronic chr8:107745877(+) A-I      intronic chr8:107379498(+) A-I      intronic chr8:107684451(+) A-I      intronic chr8:107736179(+) A-I      intronic chr8:107671421(+) A-I      intronic chr8:107735442(+) A-I      intronic chr8:107761421(+) A-I      intronic chr8:107729249(+) A-I      intronic chr8:107729280(+) A-I      intronic chr8:107736147(+) A-I      intronic chr8:107736266(+) A-I      intronic chr8:107736249(+) A-I      intronic chr8:107746293(+) A-I      intronic chr8:107731017(+) A-I      intronic chr8:107683116(+) A-I      intronic chr8:107730813(+) A-I      intronic chr8:107745986(+) A-I      intronic chr8:107729293(+) A-I      intronic chr8:107761521(+) A-I      intronic chr8:107736157(+) A-I      intronic chr8:107760946(+) A-I      intronic chr8:107376697(+) A-I      intronic chr8:107732241(+) A-I      intronic chr8:107735615(+) A-I      intronic chr8:107730987(+) A-I      intronic chr8:107761450(+) A-I      intronic chr8:107760827(+) A-I      intronic chr8:107736120(+) A-I      intronic chr8:107732034(+) A-I      intronic chr8:107739721(+) A-I      intronic chr8:107745876(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	OXR1	chr8:107674207(+) A-G intron -    22484847 chr8:107731017(+) A-G intron -    22484847 chr8:107732034(+) A-G intron -    22484847 chr8:107732241(+) A-G intron -    22484847 chr8:107735605(+) A-G intron -    22484847 chr8:107735615(+) A-G intron -    22484847 chr8:107736041(+) A-G intron -    22484847 chr8:107736069(+) A-G intron -    22484847 chr8:107736074(+) A-G intron -    22484847 chr8:107736120(+) A-G intron -    22484847 chr8:107736147(+) A-G intron -    22484847 chr8:107736157(+) A-G intron -    22484847 chr8:107736159(+) A-G intron -    22484847 chr8:107736163(+) A-G intron -    22484847 chr8:107736179(+) A-G intron -    22484847 chr8:107736197(+) A-G intron -    22484847 chr8:107736203(+) A-G intron -    22484847 chr8:107736242(+) A-G intron -    22484847 chr8:107736249(+) A-G intron -    22484847 chr8:107736266(+) A-G intron -    22484847 chr8:107745870(+) A-G intron -    22484847 chr8:107745872(+) A-G intron -    22484847 chr8:107745873(+) A-G intron -    22484847 chr8:107745876(+) A-G intron -    22484847 chr8:107745915(+) G-A intron -    22484847 chr8:107745975(+) A-G intron -    22484847 chr8:107745982(+) A-G intron -    22484847 chr8:107746230(+) T-A intron -    22484847 chr8:107746293(+) A-G intron -    22484847 chr8:107746298(+) A-G intron -    22484847 chr8:107760827(+) A-G intron -    22484847 chr8:107760853(+) A-G intron -    22484847 chr8:107760936(+) A-G intron -    22484847 chr8:107760981(+) A-G intron -    22484847 chr8:107760987(+) A-G intron -    22484847 chr8:107760998(+) A-G intron -    22484847 chr8:107761293(+) A-G intron -    22484847 chr8:107761297(+) A-G intron -    22484847 chr8:107761421(+) A-G intron -    22484847 chr8:107761440(+) A-G intron -    22484847 chr8:107761444(+) A-G intron -    22484847 chr8:107761450(+) A-G intron -    22484847 chr8:107761456(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	OXR1	chr8:107284210-107284211(+) m6A intron       24284625//25456834//24981863//22608085 chr8:107284259-107284260(+) m6A intron       24284625//24209618//25456834//24981863//22608085 chr8:107284265-107284266(+) m6A intron       24284625//24209618//25456834//24981863//22608085 chr8:107284337-107284338(+) m6A intron       24284625//24209618//24981863//22608085 chr8:107284357-107284358(+) m6A intron       24284625//24209618//24981863//22608085 chr8:107284383-107284384(+) m6A intron       24284625//24209618//24981863//22608085 chr8:107284395-107284396(+) m6A intron       24284625//24209618//24981863//22608085 chr8:107284419-107284420(+) m6A intron       24284625//24209618//24981863//22608085 chr8:107284459-107284460(+) m6A intron       24284625//24209618//25456834//24981863//22608085 chr8:107284464-107284465(+) m6A intron       24284625//24209618//25456834//24981863//22608085 chr8:107284557-107284558(+) m6A intron       24284625//24209618//25456834//24981863//22608085 chr8:107284719-107284720(+) m6A intron       24284625//24209618//25456834//24981863//22575960//22608085 chr8:107284756-107284757(+) m6A intron       24284625//24209618//25456834//24981863//22575960//22608085 chr8:107284762-107284763(+) m6A intron       24284625//24209618//25456834//24981863//22575960//22608085 chr8:107284774-107284775(+) m6A intron       24284625//24209618//25456834//24981863//22575960//22608085 chr8:107284784-107284785(+) m6A intron       24284625//24209618//25456834//24981863//22575960//22608085 chr8:107284831-107284832(+) m6A intron       24284625//24209618//25456834//24981863//22608085 chr8:107284845-107284846(+) m6A intron       24284625//24209618//25456834//24981863//22608085 chr8:107284957-107284958(+) m6A intron       24209618//24981863//22608085 chr8:107284989-107284990(+) m6A intron       - chr8:107371713-107371714(+) m6A 5'UTR       24209618 chr8:107670167-107670168(+) m6A 5'UTR//intron       - chr8:107670218-107670219(+) m6A CDS//intron       - chr8:107670353-107670354(+) m6A CDS//intron       - chr8:107718635-107718636(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//22608085 chr8:107718683-107718684(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//22575960//22608085 chr8:107718777-107718778(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:107718816-107718817(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:107718862-107718863(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:107718945-107718946(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:107718967-107718968(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:107718982-107718983(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr8:107719064-107719065(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr8:107719091-107719092(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085 chr8:107719165-107719166(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:107719179-107719180(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:107719206-107719207(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:107719229-107719230(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:107719237-107719238(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:107719238-107719239(+) Cm CDS//intron       - chr8:107719260-107719261(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:107719270-107719271(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:107719288-107719289(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:107719293-107719294(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:107719362-107719363(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr8:107719511-107719512(+) m6A 3'UTR//intron       24209618//22608085 chr8:107719605-107719606(+) m6A 3'UTR//intron       24209618 chr8:107719891-107719892(+) m6A 3'UTR//intron       24981863 chr8:107719901-107719902(+) m6A 3'UTR//intron       24981863 chr8:107738424-107738425(+) m6A 5'UTR//intron       24981863 chr8:107763206-107763207(+) m6A 3'UTR       24981863 chr8:107763884-107763885(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	OXR1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART17-5p
Interactor2: OXR1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg