Basic Information:

  VIRBase ID:  

VHID00369031

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART17-5p:  MIMAT0003715          C21orf91:  NM_001100420     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART17-5p	C21orf91
miRBase Accession/Entrez ID	MIMAT0003715	54149
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C21orf14//C21orf38//CSSG1//EURL//YG81

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	C21orf91	chr21:19178991(-) A-I      intronic chr21:19178911(-) A-I      intronic chr21:19178899(-) A-I      intronic chr21:19167141(-) A-I      intronic chr21:19167201(-) A-I      intronic chr21:19173867(-) A-I      intronic chr21:19173846(-) A-I      intronic chr21:19167220(-) A-I      intronic chr21:19167218(-) A-I      intronic chr21:19188070(-) A-I      intronic chr21:19178994(-) A-I      intronic chr21:19167192(-) A-I      intronic chr21:19167139(-) A-I      intronic chr21:19188159(-) A-I      intronic chr21:19188116(-) A-I      intronic chr21:19188243(-) A-I      intronic chr21:19188180(-) A-I      intronic chr21:19188250(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C21orf91	chr21:19165615-19165616(-) m6A 3'UTR       22608085 chr21:19165675-19165676(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr21:19165683-19165684(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr21:19165725-19165726(-) m6A 3'UTR       24284625//24981863//26404942//27773535//22608085 chr21:19165738-19165739(-) m6A 3'UTR//CDS       24284625//24981863//26404942//27773535//22608085 chr21:19165766-19165767(-) m6A 3'UTR//CDS       24284625//24981863//26404942//27773535//22608085 chr21:19165801-19165802(-) m6A 3'UTR//CDS       24284625//24981863//26404942//27773535//22608085 chr21:19165815-19165816(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr21:19168928-19168929(-) m6A CDS       24284625//24209618//27773535//22608085 chr21:19168958-19168959(-) m6A CDS       24284625//24209618//24981863//26404942//27773535//22608085 chr21:19169049-19169050(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr21:19169056-19169057(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//22608085 chr21:19169218-19169219(-) m6A CDS//exon       24284625//26404942//27773535//22608085 chr21:19169278-19169279(-) m6A CDS//exon       24209618//24981863//26404942//27773535//22608085 chr21:19169300-19169301(-) m6A CDS//exon       24209618//24981863//26404942//27773535//22608085 chr21:19169353-19169354(-) m6A CDS//exon       24209618//24981863//26404942//27773535//22608085 chr21:19169383-19169384(-) m6A CDS//exon       24209618//24981863//27773535//22608085 chr21:19183720-19183721(-) m6A exon//intron       27773535//22608085 chr21:19183780-19183781(-) m6A exon//intron       27773535 chr21:19190501-19190502(-) m6A exon//intron       22608085 chr21:19190550-19190551(-) m6A CDS//exon       24981863//27371828//22608085 chr21:19190562-19190563(-) m6A CDS//exon       25456834//24981863//27371828//22608085 chr21:19190569-19190570(-) m6A CDS//exon       25456834//24981863//27371828//22608085 chr21:19190609-19190610(-) m6A CDS//exon       25456834//24981863//27371828//22608085 chr21:19191196-19191197(-) m6A 5'UTR//intron       25456834//24981863//27371828//22608085 chr21:19191663-19191664(-) m6A 5'UTR//exon       25456834 chr21:19191677-19191678(-) m6A 5'UTR//exon       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C21orf91	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART17-5p
Interactor2: C21orf91

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg