Basic Information:

  VIRBase ID:  

VHID00368063

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART17-5p:  MIMAT0003715          MRPL19:  NM_014763     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART17-5p	MRPL19
miRBase Accession/Entrez ID	MIMAT0003715	9801
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	L19mt//MRP-L15//MRP-L19//MRPL15//RLX1//RPML15

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MRPL19	chr2:75883983(+) A-I      3'UTR chr2:75877041(+) A-I      intronic chr2:75875874(+) A-I      intronic chr2:75888901(+) A-I      3'UTR chr2:75895234(+) A-I      intronic chr2:75894046(+) A-I      intronic chr2:75895273(+) A-I      intronic chr2:75894214(+) A-I      intronic chr2:75890760(+) A-I      intronic chr2:75890826(+) A-I      intronic chr2:75895145(+) A-I      intronic chr2:75895275(+) A-I      intronic chr2:75895205(+) A-I      intronic chr2:75896977(+) A-I      intronic chr2:75875736(+) A-I      intronic chr2:75895277(+) A-I      intronic chr2:75895322(+) A-I      intronic chr2:75895163(+) A-I      intronic chr2:75890863(+) A-I      intronic chr2:75895263(+) A-I      intronic chr2:75894261(+) A-I      intronic chr2:75895246(+) A-I      intronic chr2:75895340(+) A-I      intronic chr2:75895328(+) A-I      intronic chr2:75894255(+) A-I      intronic chr2:75894295(+) A-I      intronic chr2:75876895(+) A-I      intronic chr2:75895321(+) A-I      intronic chr2:75895214(+) A-I      intronic chr2:75895155(+) A-I      intronic chr2:75895432(+) A-I      intronic chr2:75877002(+) A-I      intronic chr2:75895167(+) A-I      intronic chr2:75895332(+) A-I      intronic chr2:75895292(+) A-I      intronic chr2:75895278(+) A-I      intronic chr2:75895176(+) A-I      intronic chr2:75895188(+) A-I      intronic chr2:75895208(+) A-I      intronic chr2:75894191(+) A-I      intronic chr2:75895202(+) A-I      intronic chr2:75895213(+) A-I      intronic chr2:75894252(+) A-I      intronic chr2:75895221(+) A-I      intronic chr2:75895175(+) A-I      intronic chr2:75895270(+) A-I      intronic chr2:75895435(+) A-I      intronic chr2:75894244(+) A-I      intronic chr2:75894237(+) A-I      intronic chr2:75895225(+) A-I      intronic chr2:75895274(+) A-I      intronic chr2:75895169(+) A-I      intronic chr2:75895187(+) A-I      intronic chr2:75895501(+) A-I      intronic chr2:75895236(+) A-I      intronic chr2:75895463(+) A-I      intronic chr2:75895500(+) A-I      intronic chr2:75895352(+) A-I      intronic chr2:75895342(+) A-I      intronic chr2:75888571(+) A-I      3'UTR chr2:75888470(+) A-I      3'UTR chr2:75885280(+) A-I      3'UTR chr2:75885237(+) A-I      3'UTR chr2:75885256(+) A-I      3'UTR chr2:75885225(+) A-I      3'UTR chr2:75888885(+) A-I      3'UTR chr2:75896968(+) A-I      intronic chr2:75892442(+) A-I      intronic chr2:75890825(+) A-I      intronic chr2:75875731(+) A-I      intronic chr2:75875875(+) A-I      intronic chr2:75890918(+) A-I      intronic chr2:75890776(+) A-I      intronic chr2:75890804(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	MRPL19	chr2:75878505(+) A-I intron -    22327324 chr2:75875731(+) A-G intron -    22484847 chr2:75875872(+) A-G intron -    22484847 chr2:75876956(+) A-G intron -    22484847 chr2:75877002(+) A-G intron -    22484847 chr2:75877031(+) A-G intron -    22484847 chr2:75877032(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MRPL19	chr2:75874002-75874003(+) m6A CDS//exon       24981863 chr2:75882284-75882285(+) m6A CDS//intron       24981863//27773535//22608085 chr2:75882473-75882474(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr2:75882497-75882498(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr2:75882514-75882515(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr2:75882558-75882559(+) m6A 3'UTR//intron       24981863//27773535 chr2:75882609-75882610(+) m6A 3'UTR//intron       24981863//27773535 chr2:75882689-75882690(+) m6A 3'UTR//intron       27773535 chr2:75882737-75882738(+) m6A 3'UTR//intron       27773535 chr2:75882774-75882775(+) m6A 3'UTR//intron       27773535 chr2:75882809-75882810(+) m6A 3'UTR//intron       27773535 chr2:75882844-75882845(+) m6A 3'UTR//intron       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MRPL19	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART17-5p
Interactor2: MRPL19

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Targetscan
Support Database	RepTar//VmiReg