Basic Information:

  VIRBase ID:  

VHID00367791

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART17-5p:  MIMAT0003715          DNAH17:  NM_173628     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART17-5p	DNAH17
miRBase Accession/Entrez ID	MIMAT0003715	8632
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DNAHL1//DNEL2//SPGF39

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DNAH17	chr17:76478367(-) A-I      intronic chr17:76469437(-) A-I      intronic chr17:76465490(-) A-I      intronic chr17:76469422(-) A-I      intronic chr17:76469413(-) A-I      intronic chr17:76478374(-) A-I      intronic chr17:76465487(-) A-I      intronic chr17:76427996(-) A-I      intronic chr17:76426942(-) A-I      intronic chr17:76422095(-) A-I      intronic chr17:76465666(-) A-I      intronic chr17:76439770(-) A-I      intronic chr17:76549401(-) A-I      intronic chr17:76428002(-) A-I      intronic chr17:76507286(-) A-I      intronic chr17:76466649(-) A-I      intronic chr17:76444578(-) A-I      intronic chr17:76443275(-) A-I      intronic chr17:76439764(-) A-I      intronic chr17:76516175(-) A-I      intronic chr17:76428178(-) A-I      intronic chr17:76438126(-) A-I      intronic chr17:76438102(-) A-I      intronic chr17:76428192(-) A-I      intronic chr17:76438057(-) A-I      intronic chr17:76428213(-) A-I      intronic chr17:76436485(-) A-I      intronic chr17:76453854(-) A-I      intronic chr17:76466688(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DNAH17	chr17:76444548(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DNAH17	chr17:76433873-76433874(-) m6A CDS//exon       24284625 chr17:76433912-76433913(-) m6A CDS//exon       24284625 chr17:76449460-76449461(-) m6A CDS//exon       25456834 chr17:76449472-76449473(-) m6A CDS//exon       25456834 chr17:76449479-76449480(-) m6A CDS//exon       25456834 chr17:76449490-76449491(-) m6A CDS//exon       24284625//25456834 chr17:76449508-76449509(-) m6A CDS//exon       24284625//25456834 chr17:76450559-76450560(-) m6A CDS//exon       24284625//25456834 chr17:76450580-76450581(-) m6A CDS//exon       24284625//25456834 chr17:76450596-76450597(-) m6A CDS//exon       24284625//25456834 chr17:76457722-76457723(-) m6A CDS//exon       27773535 chr17:76472745-76472746(-) m6A CDS//intron       - chr17:76480961-76480962(-) m6A CDS//exon       24284625 chr17:76481009-76481010(-) m6A CDS//exon       24284625 chr17:76481024-76481025(-) m6A CDS//exon       24284625 chr17:76481075-76481076(-) m6A CDS//exon       24284625 chr17:76481690-76481691(-) m6A CDS//exon       24284625//22575960 chr17:76481696-76481697(-) m6A CDS//exon       24284625//22575960 chr17:76481714-76481715(-) m6A CDS//exon       24284625//24209618//22575960 chr17:76481789-76481790(-) m6A CDS//exon       24284625//24209618//25456834//22575960 chr17:76481814-76481815(-) m6A CDS//exon       24284625//24209618//25456834//22575960 chr17:76482088-76482089(-) m6A CDS//exon       24284625//24209618//25456834//22575960 chr17:76482163-76482164(-) m6A CDS//exon       24284625//24209618//24981863//22575960 chr17:76482309-76482310(-) m6A CDS//exon       24284625//24209618//24981863//22575960 chr17:76482397-76482398(-) m6A CDS//exon       24284625//22575960 chr17:76482495-76482496(-) m6A CDS//exon       24284625 chr17:76486783-76486784(-) m6A CDS//exon       24284625//22575960 chr17:76486891-76486892(-) m6A CDS//exon       24284625//22575960 chr17:76487570-76487571(-) m6A CDS//exon       24284625 chr17:76487576-76487577(-) m6A CDS       24284625 chr17:76487627-76487628(-) m6A CDS       24284625 chr17:76488782-76488783(-) m6A CDS       24284625 chr17:76488788-76488789(-) m6A CDS       24284625 chr17:76488815-76488816(-) m6A CDS       24284625 chr17:76488825-76488826(-) m6A CDS       24284625 chr17:76490211-76490212(-) m6A CDS       24284625 chr17:76490690-76490691(-) m6A CDS       24284625//22575960 chr17:76490726-76490727(-) m6A CDS       24284625//22575960 chr17:76490737-76490738(-) m6A CDS       24284625//22575960 chr17:76490786-76490787(-) m6A CDS       24284625//22575960 chr17:76490813-76490814(-) m6A CDS       24284625//22575960 chr17:76491148-76491149(-) m6A CDS       24284625//22575960 chr17:76491974-76491975(-) m6A CDS       24284625 chr17:76496393-76496394(-) m6A CDS       24284625//22575960 chr17:76496450-76496451(-) m6A CDS       24284625 chr17:76496466-76496467(-) m6A CDS       24284625 chr17:76496475-76496476(-) m6A CDS       24284625 chr17:76497914-76497915(-) m6A CDS       24284625 chr17:76498241-76498242(-) m6A exon//intron       24284625 chr17:76498980-76498981(-) m6A CDS//exon       24284625 chr17:76499064-76499065(-) m6A CDS//exon       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DNAH17	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART17-5p
Interactor2: DNAH17

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg