Detail Information
Interactor1 | Interactor2 | |
---|---|---|
Symbol | ebv-miR-BART17-5p | CDKN1A |
miRBase Accession/Entrez ID |
MIMAT0003715 | 1026 |
Organism | Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) | Homo sapiens |
Category | miRNA | mRNA |
Alias | - | CAP20//CDKN1//CIP1//MDA-6//P21//p21CIP1//SDI1//WAF1 |
Resource | Symbol | Editing Position | Change | Genetic Region | ||||||
---|---|---|---|---|---|---|---|---|---|---|
RADAR | CDKN1A |
|
Resource | Symbol | Editing Position | Change | SeqReg | exReg | PMID |
---|---|---|---|---|---|---|
DARNED | CDKN1A |
Resource | Symbol | ModificationPosition | Type | Genomic Context | PMID | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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RMBase | CDKN1A |
|
Resource | Symbol | Subcellular Localization | Tissue or Cell Line | PMID |
---|---|---|---|---|
RNALocate | CDKN1A |
Interactor1: ebv-miR-BART17-5p | Interactor2: CDKN1A |
---|
Strong-Evidence | 3'UTR indicator assay | |
---|---|---|
Weak-Evidence | PAR-CLIP | |
Prediction-Evidence | miRanda//PITA | |
Support Database | ViRBase//VmiReg |
PMID | 30615681 | Target region | 3'UTR |
---|---|---|---|
Source | ViRBase | Interactor1 expression | None |
Tissue or cell line | 293T cells | Interactor2 expression | None |
Description | Luciferase knockdown was observed for 12 out of 15 PAR-CLIP-identified miRNA interactions, confirming these cellular 3'UTRs as targets of the EBV miRNAs (Fig 3A-3C). |