Basic Information:

  VIRBase ID:  

VHID00366270

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART17-5p:  MIMAT0003715          AP2A2:  NR_144510     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART17-5p	AP2A2
miRBase Accession/Entrez ID	MIMAT0003715	161
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ADTAB//CLAPA2//HIP-9//HIP9//HYPJ

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AP2A2	chr11:989684(+) A-I      intronic chr11:999365(+) A-I      intronic chr11:999354(+) A-I      intronic chr11:999311(+) A-I      intronic chr11:927657(+) A-I      intronic chr11:947254(+) A-I      intronic chr11:947273(+) A-I      intronic chr11:963338(+) A-I      intronic chr11:963360(+) A-I      intronic chr11:999317(+) A-I      intronic chr11:963394(+) A-I      intronic chr11:964832(+) A-I      intronic chr11:927125(+) A-I      intronic chr11:946715(+) A-I      intronic chr11:999991(+) A-I      intronic chr11:927086(+) A-I      intronic chr11:999943(+) A-I      intronic chr11:999581(+) A-I      intronic chr11:999356(+) A-I      intronic chr11:966235(+) A-I      intronic chr11:963723(+) A-I      intronic chr11:949155(+) A-I      intronic chr11:927608(+) A-I      intronic chr11:935242(+) A-I      intronic chr11:927651(+) A-I      intronic chr11:946690(+) A-I      intronic chr11:967491(+) A-I      intronic chr11:998954(+) A-I      intronic chr11:947778(+) A-I      intronic chr11:946651(+) A-I      intronic chr11:927664(+) A-I      intronic chr11:998891(+) A-I      intronic chr11:966122(+) A-I      intronic chr11:946551(+) A-I      intronic chr11:951920(+) A-I      intronic chr11:946537(+) A-I      intronic chr11:927171(+) A-I      intronic chr11:967442(+) A-I      intronic chr11:997752(+) A-I      intronic chr11:927577(+) A-I      intronic chr11:927294(+) A-I      intronic chr11:999392(+) A-I      intronic chr11:930650(+) A-I      intronic chr11:997833(+) A-I      intronic chr11:997755(+) A-I      intronic chr11:997641(+) A-I      intronic chr11:945741(+) A-I      intronic chr11:966413(+) A-I      intronic chr11:930705(+) A-I      intronic chr11:927566(+) A-I      intronic chr11:945717(+) A-I      intronic chr11:945695(+) A-I      intronic chr11:947780(+) A-I      intronic chr11:966991(+) A-I      intronic chr11:938976(+) A-I      intronic chr11:966453(+) A-I      intronic chr11:930601(+) A-I      intronic chr11:947150(+) A-I      intronic chr11:929931(+) A-I      intronic chr11:997762(+) A-I      intronic chr11:950561(+) A-I      intronic chr11:939719(+) A-I      intronic chr11:930727(+) A-I      intronic chr11:939707(+) A-I      intronic chr11:939073(+) A-I      intronic chr11:939042(+) A-I      intronic chr11:930660(+) A-I      intronic chr11:938999(+) A-I      intronic chr11:938998(+) A-I      intronic chr11:949161(+) A-I      intronic chr11:938737(+) A-I      intronic chr11:938641(+) A-I      intronic chr11:927688(+) A-I      intronic chr11:967503(+) A-I      intronic chr11:966914(+) A-I      intronic chr11:951004(+) A-I      intronic chr11:933217(+) A-I      intronic chr11:988985(+) A-I      intronic chr11:966060(+) A-I      intronic chr11:966407(+) A-I      intronic chr11:934377(+) A-I      intronic chr11:934409(+) A-I      intronic chr11:962456(+) A-I      intronic chr11:963762(+) A-I      intronic chr11:956062(+) A-I      intronic chr11:927665(+) A-I      intronic chr11:952008(+) A-I      intronic chr11:960838(+) A-I      intronic chr11:951448(+) A-I      intronic chr11:966292(+) A-I      intronic chr11:966291(+) A-I      intronic chr11:927728(+) A-I      intronic chr11:966021(+) A-I      intronic chr11:951407(+) A-I      intronic chr11:956308(+) A-I      intronic chr11:951406(+) A-I      intronic chr11:945719(+) A-I      intronic chr11:963735(+) A-I      intronic chr11:951390(+) A-I      intronic chr11:963306(+) A-I      intronic chr11:951272(+) A-I      intronic chr11:963305(+) A-I      intronic chr11:960698(+) A-I      intronic chr11:963299(+) A-I      intronic chr11:949654(+) A-I      intronic chr11:963287(+) A-I      intronic chr11:927609(+) A-I      intronic chr11:962698(+) A-I      intronic chr11:998759(+) A-I      intronic chr11:962678(+) A-I      intronic chr11:927734(+) A-I      intronic chr11:962661(+) A-I      intronic chr11:949652(+) A-I      intronic chr11:949521(+) A-I      intronic chr11:956158(+) A-I      intronic chr11:927753(+) A-I      intronic chr11:962483(+) A-I      intronic chr11:999302(+) A-I      intronic chr11:949165(+) A-I      intronic chr11:927638(+) A-I      intronic chr11:960933(+) A-I      intronic chr11:966927(+) A-I      intronic chr11:938681(+) A-I      intronic chr11:947249(+) A-I      intronic chr11:965959(+) A-I      intronic chr11:927558(+) A-I      intronic chr11:949124(+) A-I      intronic chr11:947245(+) A-I      intronic chr11:929968(+) A-I      intronic chr11:935388(+) A-I      intronic chr11:947200(+) A-I      intronic chr11:963753(+) A-I      intronic chr11:948708(+) A-I      intronic chr11:947576(+) A-I      intronic chr11:967612(+) A-I      intronic chr11:946719(+) A-I      intronic chr11:947250(+) A-I      intronic chr11:936493(+) A-I      intronic chr11:938604(+) A-I      intronic chr11:974985(+) A-I      intronic chr11:951981(+) A-I      intronic chr11:938611(+) A-I      intronic chr11:938614(+) A-I      intronic chr11:960705(+) A-I      intronic chr11:933147(+) A-I      intronic chr11:997729(+) A-I      intronic chr11:929960(+) A-I      intronic chr11:960323(+) A-I      intronic chr11:965910(+) A-I      intronic chr11:949111(+) A-I      intronic chr11:950945(+) A-I      intronic chr11:960701(+) A-I      intronic chr11:933157(+) A-I      intronic chr11:937159(+) A-I      intronic chr11:937533(+) A-I      intronic chr11:950942(+) A-I      intronic chr11:947898(+) A-I      intronic chr11:963764(+) A-I      intronic chr11:997649(+) A-I      intronic chr11:963888(+) A-I      intronic chr11:999563(+) A-I      intronic chr11:963692(+) A-I      intronic chr11:998833(+) A-I      intronic chr11:927725(+) A-I      intronic chr11:927840(+) A-I      intronic chr11:933055(+) A-I      intronic chr11:936656(+) A-I      intronic chr11:947636(+) A-I      intronic chr11:1004452(+) A-I      intronic chr11:963652(+) A-I      intronic chr11:933212(+) A-I      intronic chr11:937470(+) A-I      intronic chr11:937487(+) A-I      intronic chr11:967088(+) A-I      intronic chr11:963752(+) A-I      intronic chr11:998966(+) A-I      intronic chr11:962478(+) A-I      intronic chr11:949118(+) A-I      intronic chr11:952122(+) A-I      intronic chr11:950499(+) A-I      intronic chr11:927601(+) A-I      intronic chr11:949197(+) A-I      intronic chr11:997744(+) A-I      intronic chr11:999397(+) A-I      intronic chr11:950838(+) A-I      intronic chr11:956098(+) A-I      intronic chr11:966277(+) A-I      intronic chr11:960421(+) A-I      intronic chr11:999325(+) A-I      intronic chr11:933236(+) A-I      intronic chr11:958108(+) A-I      intronic chr11:965940(+) A-I      intronic chr11:950837(+) A-I      intronic chr11:963749(+) A-I      intronic chr11:927666(+) A-I      intronic chr11:951037(+) A-I      intronic chr11:956280(+) A-I      intronic chr11:927744(+) A-I      intronic chr11:1000013(+) A-I      intronic chr11:966238(+) A-I      intronic chr11:933121(+) A-I      intronic chr11:965974(+) A-I      intronic chr11:960792(+) A-I      intronic chr11:930000(+) A-I      intronic chr11:967079(+) A-I      intronic chr11:966482(+) A-I      intronic chr11:963648(+) A-I      intronic chr11:963206(+) A-I      intronic chr11:937294(+) A-I      intronic chr11:929965(+) A-I      intronic chr11:959762(+) A-I      intronic chr11:927747(+) A-I      intronic chr11:997758(+) A-I      intronic chr11:936463(+) A-I      intronic chr11:962612(+) A-I      intronic chr11:933251(+) A-I      intronic chr11:950936(+) A-I      intronic chr11:999303(+) A-I      intronic chr11:951890(+) A-I      intronic chr11:947625(+) A-I      intronic chr11:963748(+) A-I      intronic chr11:945567(+) A-I      intronic chr11:929940(+) A-I      intronic chr11:999543(+) A-I      intronic chr11:946691(+) A-I      intronic chr11:927554(+) A-I      intronic chr11:947707(+) A-I      intronic chr11:952078(+) A-I      intronic chr11:927201(+) A-I      intronic chr11:963346(+) A-I      intronic chr11:927696(+) A-I      intronic chr11:999564(+) A-I      intronic chr11:951898(+) A-I      intronic chr11:935319(+) A-I      intronic chr11:962479(+) A-I      intronic chr11:927245(+) A-I      intronic chr11:945769(+) A-I      intronic chr11:967047(+) A-I      intronic chr11:967634(+) A-I      intronic chr11:963171(+) A-I      intronic chr11:950971(+) A-I      intronic chr11:999347(+) A-I      intronic chr11:975074(+) A-I      intronic chr11:949515(+) A-I      intronic chr11:927326(+) A-I      intronic chr11:947110(+) A-I      intronic chr11:946624(+) A-I      intronic chr11:1000067(+) A-I      intronic chr11:953304(+) A-I      intronic chr11:935197(+) A-I      intronic chr11:935153(+) A-I      intronic chr11:998923(+) A-I      intronic chr11:997784(+) A-I      intronic chr11:951942(+) A-I      intronic chr11:938858(+) A-I      intronic chr11:946720(+) A-I      intronic chr11:999582(+) A-I      intronic chr11:963831(+) A-I      intronic chr11:999603(+) A-I      intronic chr11:949126(+) A-I      intronic chr11:963650(+) A-I      intronic chr11:967011(+) A-I      intronic chr11:936662(+) A-I      intronic chr11:933148(+) A-I      intronic chr11:949720(+) A-I      intronic chr11:956107(+) A-I      intronic chr11:936541(+) A-I      intronic chr11:937120(+) A-I      intronic chr11:947128(+) A-I      intronic chr11:962622(+) A-I      intronic chr11:997865(+) A-I      intronic chr11:979750(+) A-I      intronic chr11:951021(+) A-I      intronic chr11:950493(+) A-I      intronic chr11:963861(+) A-I      intronic chr11:927145(+) A-I      intronic chr11:967154(+) A-I      intronic chr11:927200(+) A-I      intronic chr11:999567(+) A-I      intronic chr11:999391(+) A-I      intronic chr11:946663(+) A-I      intronic chr11:945809(+) A-I      intronic chr11:953277(+) A-I      intronic chr11:999401(+) A-I      intronic chr11:963347(+) A-I      intronic chr11:945513(+) A-I      intronic chr11:945728(+) A-I      intronic chr11:947595(+) A-I      intronic chr11:935407(+) A-I      intronic chr11:999326(+) A-I      intronic chr11:960458(+) A-I      intronic chr11:997785(+) A-I      intronic chr11:998877(+) A-I      intronic chr11:950972(+) A-I      intronic chr11:997802(+) A-I      intronic chr11:956078(+) A-I      intronic chr11:939706(+) A-I      intronic chr11:962674(+) A-I      intronic chr11:960384(+) A-I      intronic chr11:927606(+) A-I      intronic chr11:927300(+) A-I      intronic chr11:966072(+) A-I      intronic chr11:963697(+) A-I      intronic chr11:937496(+) A-I      intronic chr11:997650(+) A-I      intronic chr11:960343(+) A-I      intronic chr11:935193(+) A-I      intronic chr11:997862(+) A-I      intronic chr11:959769(+) A-I      intronic chr11:960930(+) A-I      intronic chr11:927752(+) A-I      intronic chr11:930782(+) A-I      intronic chr11:927327(+) A-I      intronic chr11:960087(+) A-I      intronic chr11:939131(+) A-I      intronic chr11:960841(+) A-I      intronic chr11:958804(+) A-I      intronic chr11:963653(+) A-I      intronic chr11:941861(+) A-I      intronic chr11:952130(+) A-I      intronic chr11:962610(+) A-I      intronic chr11:959736(+) A-I      intronic chr11:936671(+) A-I      intronic chr11:927560(+) A-I      intronic chr11:967117(+) A-I      intronic chr11:947808(+) A-I      intronic chr11:966426(+) A-I      intronic chr11:974430(+) A-I      intronic chr11:998753(+) A-I      intronic chr11:950864(+) A-I      intronic chr11:945516(+) A-I      intronic chr11:963332(+) A-I      intronic chr11:927656(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AP2A2	chr11:963648(+) A-I intron -    22327324 chr11:927566(+) A-I intron -    22028664 chr11:927577(+) A-I intron -    22028664 chr11:927608(+) A-I intron -    22028664 chr11:927609(+) A-I intron -    22028664 chr11:927638(+) A-I intron -    22028664 chr11:927651(+) A-I intron -    22028664 chr11:927664(+) A-I intron -    22028664 chr11:927665(+) A-I intron -    22028664 chr11:927688(+) A-I intron -    22028664 chr11:927696(+) A-I intron -    22028664 chr11:927752(+) A-I intron -    22028664 chr11:999518(+) A-I intron -    21960545 chr11:963648(+) A-G intron -    22484847 chr11:963653(+) A-G intron -    22484847 chr11:963762(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AP2A2	chr11:1003778-1003779(+) Y 3'UTR//CDS//exon//intron       26075521 chr11:1006556-1006557(+) m6A 3'UTR//CDS//exon//intron       - chr11:1006575-1006576(+) m6A 3'UTR//CDS//exon//intron       - chr11:1006649-1006650(+) m6A exon//intron       - chr11:1008830-1008831(+) m6A exon//intron       - chr11:1008847-1008848(+) m6A exon//intron       - chr11:1010640-1010641(+) m6A 3'UTR//CDS//exon       24284625//22575960 chr11:1010785-1010786(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr11:1010823-1010824(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr11:1010879-1010880(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr11:1011132-1011133(+) m6A 3'UTR       24284625//24981863 chr11:1011171-1011172(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr11:1011343-1011344(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr11:1011376-1011377(+) m6A 3'UTR       25456834//24981863//22608085 chr11:1011576-1011577(+) m6A 3'UTR       - chr11:924908-924909(+) m6A exon       24981863 chr11:925885-925886(+) m6A 5'UTR//exon//intron       24981863 chr11:946802-946803(+) m6A 5'UTR//intron       - chr11:946809-946810(+) m6A 5'UTR//intron       - chr11:946816-946817(+) m6A 5'UTR//intron       - chr11:946886-946887(+) m6A 5'UTR//intron       - chr11:959469-959470(+) m6A 5'UTR//CDS//exon//intron       24981863 chr11:959476-959477(+) m6A 5'UTR//CDS//exon//intron       24981863 chr11:986845-986846(+) m6A CDS//exon//intron       24284625 chr11:993353-993354(+) m6A CDS//intron       24284625//22575960 chr11:993368-993369(+) m6A CDS//intron       24284625//22575960 chr11:993848-993849(+) m6A CDS//intron       24284625//22575960 chr11:994165-994166(+) m6A CDS//exon//intron       22575960 chr11:994174-994175(+) m6A CDS//exon//intron       24284625//22575960 chr11:994186-994187(+) m6A CDS//exon//intron       24284625//22575960 chr11:996087-996088(+) m6A exon//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AP2A2	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART17-5p
Interactor2: AP2A2

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg