Detail Information

Basic Information:


  VIRBase ID:  

VHID00366102

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART16:           FNDC9:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART16 FNDC9
miRBase
Accession/Entrez ID
MIMAT0003714 408263
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - C5orf40

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FNDC9
chr5:156770434-156770435(-) m6A CDS       -
chr5:156770467-156770468(-) m6A CDS       -
chr5:156770524-156770525(-) m6A CDS       -
chr5:156770539-156770540(-) m6A CDS       -
chr5:156772402-156772403(-) m6A 5'UTR//intron       -
chr5:156772433-156772434(-) m6A 5'UTR//intron       -
chr5:156772655-156772656(-) m6A 5'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate FNDC9
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART16
Interactor2: FNDC9

Evidence Support:


Prediction-Evidence miRanda//PITA
Support Database VmiReg

Starting a new search, please wait ...