Basic Information:

  VIRBase ID:  

VHID00364996

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART16:  MIMAT0003714          TMEM101:  NM_001304813     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART16	TMEM101
miRBase Accession/Entrez ID	MIMAT0003714	84336
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM101	chr17:42088717-42088718(-) m6A 3'UTR       27773535 chr17:42088758-42088759(-) m6A 3'UTR       27773535 chr17:42088868-42088869(-) m6A 3'UTR       24209618//25456834//24981863//27773535//27371828 chr17:42088908-42088909(-) m6A 3'UTR       24209618//24981863//27773535//27371828 chr17:42088964-42088965(-) m6A 3'UTR       24209618//24981863//27773535 chr17:42089324-42089325(-) m6A CDS       25456834//24981863 chr17:42089365-42089366(-) m6A CDS       25456834//24981863 chr17:42092476-42092477(-) m6A 5'UTR       25456834 chr17:42092520-42092521(-) m6A 5'UTR       25456834 chr17:42101063-42101064(-) m6A exon       25456834//27773536//22608085 chr17:42101149-42101150(-) m6A exon       25456834//24981863//27773536//22608085 chr17:42101214-42101215(-) m6A exon       25456834//24981863//27773536//22608085 chr17:42101253-42101254(-) m6A exon       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM101	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART16
Interactor2: TMEM101

Evidence Support:

Prediction-Evidence	cRep//PITA
Support Database	RepTar//VmiReg