Basic Information:

  VIRBase ID:  

VHID00363422

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART16:  MIMAT0003714          ADNP2:  NM_014913     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART16	ADNP2
miRBase Accession/Entrez ID	MIMAT0003714	22850
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ZNF508

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ADNP2	chr18:77886461(+) A-I      intronic chr18:77886483(+) A-I      intronic chr18:77886490(+) A-I      intronic chr18:77887246(+) A-I      intronic chr18:77887247(+) A-I      intronic chr18:77887248(+) A-I      intronic chr18:77886474(+) A-I      intronic chr18:77876098(+) A-I      intronic chr18:77876232(+) A-I      intronic chr18:77878566(+) A-I      intronic chr18:77878637(+) A-I      intronic chr18:77878667(+) A-I      intronic chr18:77878694(+) A-I      intronic chr18:77878704(+) A-I      intronic chr18:77879900(+) A-I      intronic chr18:77879920(+) A-I      intronic chr18:77879932(+) A-I      intronic chr18:77879942(+) A-I      intronic chr18:77879968(+) A-I      intronic chr18:77879969(+) A-I      intronic chr18:77880031(+) A-I      intronic chr18:77880032(+) A-I      intronic chr18:77883614(+) A-I      intronic chr18:77883646(+) A-I      intronic chr18:77886357(+) A-I      intronic chr18:77886368(+) A-I      intronic chr18:77876053(+) A-I      intronic chr18:77876088(+) A-I      intronic chr18:77890764(+) A-I      intronic chr18:77890838(+) A-I      intronic chr18:77890857(+) A-I      intronic chr18:77886377(+) A-I      intronic chr18:77886380(+) A-I      intronic chr18:77886422(+) A-I      intronic chr18:77886517(+) A-I      intronic chr18:77890884(+) A-I      intronic chr18:77876093(+) A-I      intronic chr18:77890707(+) A-I      intronic chr18:77886520(+) A-I      intronic chr18:77887086(+) A-I      intronic chr18:77887087(+) A-I      intronic chr18:77887142(+) A-I      intronic chr18:77887152(+) A-I      intronic chr18:77887161(+) A-I      intronic chr18:77887233(+) A-I      intronic chr18:77887238(+) A-I      intronic chr18:77890706(+) A-I      intronic chr18:77890744(+) A-I      intronic chr18:77890755(+) A-I      intronic chr18:77890881(+) A-I      intronic chr18:77886435(+) A-I      intronic chr18:77891765(+) A-I      intronic chr18:77890742(+) A-I      intronic chr18:77876268(+) A-I      intronic chr18:77890683(+) A-I      intronic chr18:77890677(+) A-I      intronic chr18:77878683(+) A-I      intronic chr18:77876155(+) A-I      intronic chr18:77886273(+) A-I      intronic chr18:77878677(+) A-I      intronic chr18:77878276(+) A-I      intronic chr18:77887061(+) A-I      intronic chr18:77887276(+) A-I      intronic chr18:77890878(+) A-I      intronic chr18:77886285(+) A-I      intronic chr18:77886386(+) A-I      intronic chr18:77876243(+) A-I      intronic chr18:77876152(+) A-I      intronic chr18:77878700(+) A-I      intronic chr18:77876265(+) A-I      intronic chr18:77890768(+) A-I      intronic chr18:77887126(+) A-I      intronic chr18:77886453(+) A-I      intronic chr18:77887263(+) A-I      intronic chr18:77886412(+) A-I      intronic chr18:77876231(+) A-I      intronic chr18:77883678(+) A-I      intronic chr18:77890839(+) A-I      intronic chr18:77890703(+) A-I      intronic chr18:77876146(+) A-I      intronic chr18:77887260(+) A-I      intronic chr18:77886383(+) A-I      intronic chr18:77876190(+) A-I      intronic chr18:77876223(+) A-I      intronic chr18:77876160(+) A-I      intronic chr18:77881383(+) A-I      intronic chr18:77878279(+) A-I      intronic chr18:77887067(+) A-I      intronic chr18:77876135(+) A-I      intronic chr18:77876161(+) A-I      intronic chr18:77876220(+) A-I      intronic chr18:77876164(+) A-I      intronic chr18:77886402(+) A-I      intronic chr18:77890702(+) A-I      intronic chr18:77881319(+) A-I      intronic chr18:77879880(+) A-I      intronic chr18:77886279(+) A-I      intronic chr18:77886315(+) A-I      intronic chr18:77876246(+) A-I      intronic chr18:77890689(+) A-I      intronic chr18:77878703(+) A-I      intronic chr18:77883649(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ADNP2	chr18:77882702(+) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ADNP2	chr18:77867765-77867766(+) m1A 5'UTR//intron       26863196 chr18:77893624-77893625(+) m6A 3'UTR//CDS//intron       24284625//24981863//22608085 chr18:77893702-77893703(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//22575960//22608085 chr18:77893728-77893729(+) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//22575960//22608085 chr18:77893786-77893787(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77893866-77893867(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr18:77893893-77893894(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr18:77894008-77894009(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr18:77894054-77894055(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr18:77894067-77894068(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr18:77894072-77894073(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr18:77894102-77894103(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr18:77894191-77894192(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77894213-77894214(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77894323-77894324(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77894432-77894433(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77894454-77894455(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77894478-77894479(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77894519-77894520(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77894527-77894528(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77894551-77894552(+) Y CDS//intron       26075521 chr18:77894703-77894704(+) m6A CDS//intron       24284625//24981863 chr18:77894769-77894770(+) m6A CDS//intron       24284625 chr18:77894802-77894803(+) m6A CDS//intron       24284625 chr18:77894868-77894869(+) m6A CDS//intron       24284625 chr18:77894899-77894900(+) m6A CDS//intron       24284625//24981863 chr18:77895003-77895004(+) m6A CDS//intron       24284625//25456834//24981863//22608085 chr18:77895044-77895045(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr18:77895061-77895062(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr18:77895095-77895096(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77895116-77895117(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77895340-77895341(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr18:77895346-77895347(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr18:77895359-77895360(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr18:77895378-77895379(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77895473-77895474(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77895488-77895489(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77896126-77896127(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr18:77896138-77896139(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr18:77896175-77896176(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77896261-77896262(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr18:77896352-77896353(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr18:77896371-77896372(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr18:77896379-77896380(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr18:77896490-77896491(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr18:77896517-77896518(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr18:77896646-77896647(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr18:77896661-77896662(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr18:77896672-77896673(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr18:77896685-77896686(+) m6A CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr18:77896693-77896694(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr18:77896838-77896839(+) m6A 3'UTR//intron       24284625//22575960//22608085 chr18:77896906-77896907(+) m6A 3'UTR//intron       24284625//22608085 chr18:77897007-77897008(+) m6A 3'UTR//intron       24981863//22608085 chr18:77897043-77897044(+) m6A 3'UTR//intron       24209618//24981863//22608085 chr18:77897157-77897158(+) m6A 3'UTR//intron       22608085 chr18:77897857-77897858(+) m6A 3'UTR//intron       - chr18:77897887-77897888(+) m6A 3'UTR//intron       - chr18:77897902-77897903(+) m6A 3'UTR//intron       - chr18:77897915-77897916(+) m6A 3'UTR//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ADNP2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART16
Interactor2: ADNP2

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg