Basic Information:

  VIRBase ID:  

VHID00362897

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART16:  MIMAT0003714          USP10:  NR_073578     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART16	USP10
miRBase Accession/Entrez ID	MIMAT0003714	9100
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	UBPO

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	USP10	chr16:84783813(+) A-I      intronic chr16:84783858(+) A-I      intronic chr16:84783849(+) A-I      intronic chr16:84759718(+) A-I      intronic chr16:84807698(+) A-I      intronic chr16:84807700(+) A-I      intronic chr16:84807709(+) A-I      intronic chr16:84807819(+) A-I      intronic chr16:84807870(+) A-I      intronic chr16:84808177(+) A-I      intronic chr16:84741506(+) A-I      intronic chr16:84783828(+) A-I      intronic chr16:84807829(+) A-I      intronic chr16:84748723(+) A-I      intronic chr16:84807831(+) A-I      intronic chr16:84807836(+) A-I      intronic chr16:84783799(+) A-I      intronic chr16:84807685(+) A-I      intronic chr16:84805779(+) A-I      intronic chr16:84738912(+) A-I      intronic chr16:84736437(+) A-I      intronic chr16:84735883(+) A-I      intronic chr16:84735780(+) A-I      intronic chr16:84735763(+) A-I      intronic chr16:84741604(+) A-I      intronic chr16:84741499(+) A-I      intronic chr16:84810609(+) A-I      intronic chr16:84810568(+) A-I      intronic chr16:84810536(+) A-I      intronic chr16:84810523(+) A-I      intronic chr16:84808280(+) A-I      intronic chr16:84807785(+) A-I      intronic chr16:84807777(+) A-I      intronic chr16:84807767(+) A-I      intronic chr16:84807660(+) A-I      intronic chr16:84807601(+) A-I      intronic chr16:84807600(+) A-I      intronic chr16:84805878(+) A-I      intronic chr16:84805877(+) A-I      intronic chr16:84789167(+) A-I      intronic chr16:84805824(+) A-I      intronic chr16:84805787(+) A-I      intronic chr16:84805324(+) A-I      intronic chr16:84805317(+) A-I      intronic chr16:84805298(+) A-I      intronic chr16:84805279(+) A-I      intronic chr16:84805265(+) A-I      intronic chr16:84804608(+) A-I      intronic chr16:84804467(+) A-I      intronic chr16:84786642(+) A-I      intronic chr16:84783983(+) A-I      intronic chr16:84783854(+) A-I      intronic chr16:84783853(+) A-I      intronic chr16:84783832(+) A-I      intronic chr16:84783742(+) A-I      intronic chr16:84783740(+) A-I      intronic chr16:84782162(+) A-I      intronic chr16:84782110(+) A-I      intronic chr16:84782014(+) A-I      intronic chr16:84781974(+) A-I      intronic chr16:84781953(+) A-I      intronic chr16:84781681(+) A-I      intronic chr16:84781680(+) A-I      intronic chr16:84781649(+) A-I      intronic chr16:84781573(+) A-I      intronic chr16:84781570(+) A-I      intronic chr16:84781556(+) A-I      intronic chr16:84781547(+) A-I      intronic chr16:84781542(+) A-I      intronic chr16:84781353(+) A-I      intronic chr16:84781234(+) A-I      intronic chr16:84781224(+) A-I      intronic chr16:84756327(+) A-I      intronic chr16:84752681(+) A-I      intronic chr16:84752674(+) A-I      intronic chr16:84752660(+) A-I      intronic chr16:84752659(+) A-I      intronic chr16:84752581(+) A-I      intronic chr16:84752268(+) A-I      intronic chr16:84752264(+) A-I      intronic chr16:84752243(+) A-I      intronic chr16:84752242(+) A-I      intronic chr16:84752186(+) A-I      intronic chr16:84752118(+) A-I      intronic chr16:84742034(+) A-I      intronic chr16:84742012(+) A-I      intronic chr16:84741976(+) A-I      intronic chr16:84741936(+) A-I      intronic chr16:84741903(+) A-I      intronic chr16:84741898(+) A-I      intronic chr16:84741877(+) A-I      intronic chr16:84741846(+) A-I      intronic chr16:84741800(+) A-I      intronic chr16:84740276(+) A-I      intronic chr16:84740211(+) A-I      intronic chr16:84739763(+) A-I      intronic chr16:84739525(+) A-I      intronic chr16:84739508(+) A-I      intronic chr16:84739426(+) A-I      intronic chr16:84739099(+) A-I      intronic chr16:84739098(+) A-I      intronic chr16:84739084(+) A-I      intronic chr16:84739024(+) A-I      intronic chr16:84739003(+) A-I      intronic chr16:84738999(+) A-I      intronic chr16:84738983(+) A-I      intronic chr16:84738977(+) A-I      intronic chr16:84738964(+) A-I      intronic chr16:84738942(+) A-I      intronic chr16:84738938(+) A-I      intronic chr16:84739044(+) A-I      intronic chr16:84808194(+) A-I      intronic chr16:84739377(+) A-I      intronic chr16:84752462(+) A-I      intronic chr16:84739443(+) A-I      intronic chr16:84789193(+) A-I      intronic chr16:84805677(+) A-I      intronic chr16:84807680(+) A-I      intronic chr16:84807735(+) A-I      intronic chr16:84756199(+) A-I      intronic chr16:84752565(+) A-I      intronic chr16:84781270(+) A-I      intronic chr16:84752184(+) A-I      intronic chr16:84752516(+) A-I      intronic chr16:84740328(+) A-I      intronic chr16:84770625(+) A-I      intronic chr16:84810593(+) A-I      intronic chr16:84805327(+) A-I      intronic chr16:84739036(+) A-I      intronic chr16:84756311(+) A-I      intronic chr16:84781779(+) A-I      intronic chr16:84805322(+) A-I      intronic chr16:84741593(+) A-I      intronic chr16:84739412(+) A-I      intronic chr16:84781315(+) A-I      intronic chr16:84807679(+) A-I      intronic chr16:84752438(+) A-I      intronic chr16:84741895(+) A-I      intronic chr16:84789300(+) A-I      intronic chr16:84741520(+) A-I      intronic chr16:84783926(+) A-I      intronic chr16:84807745(+) A-I      intronic chr16:84752282(+) A-I      intronic chr16:84741970(+) A-I      intronic chr16:84807762(+) A-I      intronic chr16:84782090(+) A-I      intronic chr16:84805783(+) A-I      intronic chr16:84781296(+) A-I      intronic chr16:84736417(+) A-I      intronic chr16:84752115(+) A-I      intronic chr16:84805909(+) A-I      intronic chr16:84805363(+) A-I      intronic chr16:84756248(+) A-I      intronic chr16:84781309(+) A-I      intronic chr16:84807837(+) A-I      intronic chr16:84781231(+) A-I      intronic chr16:84736457(+) A-I      intronic chr16:84741456(+) A-I      intronic chr16:84805315(+) A-I      intronic chr16:84804522(+) A-I      intronic chr16:84807703(+) A-I      intronic chr16:84740420(+) A-I      intronic chr16:84740345(+) A-I      intronic chr16:84781961(+) A-I      intronic chr16:84810519(+) A-I      intronic chr16:84741914(+) A-I      intronic chr16:84805919(+) A-I      intronic chr16:84755469(+) A-I      intronic chr16:84805219(+) A-I      intronic chr16:84808327(+) A-I      intronic chr16:84808116(+) A-I      intronic chr16:84742007(+) A-I      intronic chr16:84739419(+) A-I      intronic chr16:84807594(+) A-I      intronic chr16:84741909(+) A-I      intronic chr16:84805711(+) A-I      intronic chr16:84752303(+) A-I      intronic chr16:84782093(+) A-I      intronic chr16:84752608(+) A-I      intronic chr16:84741563(+) A-I      intronic chr16:84781188(+) A-I      intronic chr16:84739723(+) A-I      intronic chr16:84782049(+) A-I      intronic chr16:84745591(+) A-I      intronic chr16:84783954(+) A-I      intronic chr16:84783903(+) A-I      intronic chr16:84783852(+) A-I      intronic chr16:84752183(+) A-I      intronic chr16:84808206(+) A-I      intronic chr16:84752308(+) A-I      intronic chr16:84783928(+) A-I      intronic chr16:84781190(+) A-I      intronic chr16:84805274(+) A-I      intronic chr16:84786840(+) A-I      intronic chr16:84736452(+) A-I      intronic chr16:84735569(+) A-I      intronic chr16:84804620(+) A-I      intronic chr16:84783126(+) A-I      intronic chr16:84743656(+) A-I      intronic chr16:84743765(+) A-I      intronic chr16:84752160(+) A-I      intronic chr16:84789962(+) A-I      intronic chr16:84781356(+) A-I      intronic chr16:84741528(+) A-I      intronic chr16:84808252(+) A-I      intronic chr16:84735863(+) A-I      intronic chr16:84751977(+) A-I      intronic chr16:84739754(+) A-I      intronic chr16:84783867(+) A-I      intronic chr16:84781571(+) A-I      intronic chr16:84738955(+) A-I      intronic chr16:84807828(+) A-I      intronic chr16:84781299(+) A-I      intronic chr16:84805762(+) A-I      intronic chr16:84781393(+) A-I      intronic chr16:84807736(+) A-I      intronic chr16:84741470(+) A-I      intronic chr16:84781247(+) A-I      intronic chr16:84752499(+) A-I      intronic chr16:84805242(+) A-I      intronic chr16:84810442(+) A-I      intronic chr16:84805797(+) A-I      intronic chr16:84752175(+) A-I      intronic chr16:84781581(+) A-I      intronic chr16:84752498(+) A-I      intronic chr16:84781295(+) A-I      intronic chr16:84781639(+) A-I      intronic chr16:84739514(+) A-I      intronic chr16:84736434(+) A-I      intronic chr16:84805840(+) A-I      intronic chr16:84783893(+) A-I      intronic chr16:84739405(+) A-I      intronic chr16:84740353(+) A-I      intronic chr16:84756261(+) A-I      intronic chr16:84742002(+) A-I      intronic chr16:84807717(+) A-I      intronic chr16:84810558(+) A-I      intronic chr16:84805236(+) A-I      intronic chr16:84782039(+) A-I      intronic chr16:84781762(+) A-I      intronic chr16:84741801(+) A-I      intronic chr16:84781688(+) A-I      intronic chr16:84781653(+) A-I      intronic chr16:84805837(+) A-I      intronic chr16:84741523(+) A-I      intronic chr16:84739004(+) A-I      intronic chr16:84805938(+) A-I      intronic chr16:84736478(+) A-I      intronic chr16:84743783(+) A-I      intronic chr16:84807768(+) A-I      intronic chr16:84739511(+) A-I      intronic chr16:84756247(+) A-I      intronic chr16:84805273(+) A-I      intronic chr16:84808337(+) A-I      intronic chr16:84781373(+) A-I      intronic chr16:84804117(+) A-I      intronic chr16:84805376(+) A-I      intronic chr16:84735829(+) A-I      intronic chr16:84781617(+) A-I      intronic chr16:84807765(+) A-I      intronic chr16:84756436(+) A-I      intronic chr16:84805319(+) A-I      intronic chr16:84805682(+) A-I      intronic chr16:84743629(+) A-I      intronic chr16:84783859(+) A-I      intronic chr16:84756346(+) A-I      intronic chr16:84756340(+) A-I      intronic chr16:84782009(+) A-I      intronic chr16:84781610(+) A-I      intronic chr16:84805316(+) A-I      intronic chr16:84783894(+) A-I      intronic chr16:84741430(+) A-I      intronic chr16:84743755(+) A-I      intronic chr16:84739608(+) A-I      intronic chr16:84783907(+) A-I      intronic chr16:84752678(+) A-I      intronic chr16:84756349(+) A-I      intronic chr16:84752478(+) A-I      intronic chr16:84782075(+) A-I      intronic chr16:84752595(+) A-I      intronic chr16:84805314(+) A-I      intronic chr16:84741905(+) A-I      intronic chr16:84783935(+) A-I      intronic chr16:84756191(+) A-I      intronic chr16:84752473(+) A-I      intronic chr16:84805896(+) A-I      intronic chr16:84752274(+) A-I      intronic chr16:84808283(+) A-I      intronic chr16:84781360(+) A-I      intronic chr16:84805367(+) A-I      intronic chr16:84739039(+) A-I      intronic chr16:84741935(+) A-I      intronic chr16:84741900(+) A-I      intronic chr16:84738857(+) A-I      intronic chr16:84752672(+) A-I      intronic chr16:84781763(+) A-I      intronic chr16:84808216(+) A-I      intronic chr16:84780064(+) A-I      intronic chr16:84756351(+) A-I      intronic chr16:84808349(+) A-I      intronic chr16:84784659(+) A-I      intronic chr16:84752110(+) A-I      intronic chr16:84783131(+) A-I      intronic chr16:84741403(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	USP10	chr16:84788485(+) A-I intron -    21960545 chr16:84781247(+) A-G intron -    22484847 chr16:84781295(+) A-G intron -    22484847 chr16:84781299(+) A-G intron -    22484847 chr16:84781309(+) A-G intron -    22484847 chr16:84781571(+) A-G intron -    22484847 chr16:84789193(+) A-G intron -    22484847 chr16:84804620(+) A-G intron -    22484847 chr16:84805363(+) A-G intron -    22484847 chr16:84805367(+) A-G intron -    22484847 chr16:84805783(+) A-G intron -    22484847 chr16:84805840(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	USP10	chr16:84778284-84778285(+) m6A 3'UTR//CDS//exon//intron       24981863 chr16:84778306-84778307(+) m6A 3'UTR//CDS//exon//intron       24981863 chr16:84778337-84778338(+) m6A 3'UTR//CDS//exon//intron       24284625//24981863//22608085 chr16:84778521-84778522(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:84778646-84778647(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:84778708-84778709(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:84778727-84778728(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:84778736-84778737(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:84778798-84778799(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:84778871-84778872(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:84778885-84778886(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:84778928-84778929(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:84778947-84778948(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:84779018-84779019(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:84779024-84779025(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:84779034-84779035(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:84779170-84779171(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:84792352-84792353(+) m6A 3'UTR//CDS//intron       - chr16:84796641-84796642(+) m6A 3'UTR//CDS//exon       27773535 chr16:84796661-84796662(+) m6A 3'UTR//CDS//exon       27773535 chr16:84797718-84797719(+) m6A 3'UTR//CDS//exon       27773535 chr16:84797749-84797750(+) m6A 3'UTR//CDS//exon       24981863//27773535 chr16:84797779-84797780(+) m6A 3'UTR//CDS//intron       24981863//27773535 chr16:84797796-84797797(+) m6A 3'UTR//CDS//intron       24981863//27773535 chr16:84797801-84797802(+) m6A 3'UTR//CDS//intron       24981863//27773535 chr16:84797834-84797835(+) m6A 3'UTR//CDS//intron       24981863 chr16:84812595-84812596(+) m6A 3'UTR//CDS       24284625 chr16:84812630-84812631(+) m6A 3'UTR//CDS       24284625 chr16:84812677-84812678(+) m6A 3'UTR//CDS       24284625 chr16:84812688-84812689(+) m6A 3'UTR       24284625 chr16:84812731-84812732(+) m6A 3'UTR       24284625//24981863 chr16:84812783-84812784(+) m6A 3'UTR       24284625//24981863//22608085 chr16:84812895-84812896(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr16:84812930-84812931(+) m6A 3'UTR       24284625//24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	USP10	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART16
Interactor2: USP10

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg