Basic Information:

  VIRBase ID:  

VHID00362100

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART16:  MIMAT0003714          MIF:  NM_002415     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART16	MIF
miRBase Accession/Entrez ID	MIMAT0003714	4282
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GIF//GLIF//MMIF

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MIF	chr22:24236329-24236330(+) m6A 5'UTR       25456834 chr22:24236339-24236340(+) m6A 5'UTR       25456834 chr22:24236357-24236358(+) m6A 5'UTR       25456834 chr22:24236387-24236388(+) m6A 5'UTR       25456834 chr22:24236564-24236565(+) m6A 5'UTR       24284625//25456834//24981863//26404942//27371828//22575960 chr22:24236660-24236661(+) Cm 5'UTR//exon       - chr22:24236680-24236681(+) m6A CDS//exon       24284625//24981863//27371828//22575960 chr22:24236983-24236984(+) m6A CDS//exon       22575960 chr22:24237048-24237049(+) Am CDS//exon       - chr22:24237067-24237068(+) m6A CDS//exon       22575960 chr22:24237127-24237128(+) m6A CDS//exon       26404942//22575960 chr22:24237187-24237188(+) m6A exon//intron       26404942//22575960 chr22:24237273-24237274(+) m6A CDS//exon       22575960 chr22:24237304-24237305(+) m6A 3'UTR//exon       22575960 chr22:24237336-24237337(+) m6A 3'UTR//exon       22575960 chr22:24237406-24237407(+) m6A 3'UTR//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MIF	Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleus HeLa-S3 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART16
Interactor2: MIF

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg