Basic Information:

  VIRBase ID:  

VHID00361900

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART16:  MIMAT0003714          HOXA11:  NM_005523     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART16	HOXA11
miRBase Accession/Entrez ID	MIMAT0003714	3207
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HOX1//HOX1I//RUSAT1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HOXA11	chr7:27221416-27221417(-) m6A 3'UTR       22608085 chr7:27221459-27221460(-) m6A 3'UTR       24284625//22608085 chr7:27221548-27221549(-) m6A 3'UTR       24284625//27773535//22575960//22608085 chr7:27221570-27221571(-) m6A 3'UTR       24284625//27773535//22575960//22608085 chr7:27221676-27221677(-) m6A 3'UTR       24284625//24981863//22608085 chr7:27221905-27221906(-) m6A 3'UTR       24284625//22608085 chr7:27221916-27221917(-) m6A 3'UTR       24284625//22608085 chr7:27221985-27221986(-) m6A 3'UTR       22608085 chr7:27222035-27222036(-) m6A 3'UTR       22608085 chr7:27222084-27222085(-) m6A 3'UTR       22608085 chr7:27222095-27222096(-) m6A 3'UTR       22608085 chr7:27222173-27222174(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr7:27222261-27222262(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr7:27222412-27222413(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr7:27222451-27222452(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr7:27222484-27222485(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr7:27224071-27224072(-) m6A CDS       24284625//24209618//27773536 chr7:27224185-27224186(-) m6A CDS       24209618//27773536 chr7:27224488-27224489(-) m6A CDS       24284625//24981863//27773536//22608085 chr7:27224654-27224655(-) m6A CDS//intron       24284625//24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HOXA11	Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART16
Interactor2: HOXA11

Evidence Support:

Prediction-Evidence	cRep//PITA
Support Database	RepTar//VmiReg