Basic Information:

  VIRBase ID:  

VHID00361543

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART16:  MIMAT0003714          CDKN1B:  NM_004064     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART16	CDKN1B
miRBase Accession/Entrez ID	MIMAT0003714	1027
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CDKN4//KIP1//MEN1B//MEN4//P27KIP1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CDKN1B	chr12:12868290(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CDKN1B	chr12:12870457-12870458(+) m6A 5'UTR//intron       24284625//24981863//22575960//22608085 chr12:12870481-12870482(+) m6A 5'UTR//intron       24284625//24981863//22575960//22608085 chr12:12870568-12870569(+) m6A 5'UTR//intron       - chr12:12870760-12870761(+) m6A 5'UTR//intron       24209618//24981863//22608085 chr12:12870864-12870865(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr12:12870882-12870883(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr12:12870903-12870904(+) m6A CDS//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr12:12870921-12870922(+) Gm CDS//intron       - chr12:12870924-12870925(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr12:12870976-12870977(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr12:12871042-12871043(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:12871152-12871153(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr12:12871167-12871168(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr12:12871175-12871176(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr12:12871188-12871189(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr12:12871773-12871774(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:12871790-12871791(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr12:12871880-12871881(+) m6A 3'UTR//exon//intron       24284625//24981863//22608085 chr12:12874075-12874076(+) m6A 3'UTR//CDS//exon       24284625//24981863//26404942//22608085 chr12:12874098-12874099(+) m6A 3'UTR//CDS//exon       24284625//24981863//26404942//27773535//22608085 chr12:12874247-12874248(+) m6A 3'UTR       24981863//22608085 chr12:12874282-12874283(+) m6A 3'UTR       24981863 chr12:12875101-12875102(+) m6A 3'UTR       27773535 chr12:12875290-12875291(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CDKN1B	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART16
Interactor2: CDKN1B

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg