Basic Information:

  VIRBase ID:  

VHID00360726

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART15:  MIMAT0003713          CEP120:  NM_001375407     

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Interactor Information:

	Interactor1	Interactor2
Symbol	ebv-miR-BART15	CEP120
miRBase Accession/Entrez ID	MIMAT0003713	153241
Organism	Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CCDC100//JBTS31//SRTD13

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CEP120	chr5:122754429(-) A-I      intronic chr5:122755129(-) A-I      intronic chr5:122754435(-) A-I      intronic chr5:122755181(-) A-I      intronic chr5:122755155(-) A-I      intronic chr5:122743769(-) A-I      intronic chr5:122743758(-) A-I      intronic chr5:122754428(-) A-I      intronic chr5:122731452(-) A-I      intronic chr5:122728462(-) A-I      intronic chr5:122743754(-) A-I      intronic chr5:122755218(-) A-I      intronic chr5:122733666(-) A-I      intronic chr5:122755119(-) A-I      intronic chr5:122751363(-) A-I      intronic chr5:122732958(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	CEP120	chr5:122742327(-) A-G intron -    22484847 chr5:122732958(-) A-G intron -    22484847 chr5:122733666(-) A-G intron -    22484847 chr5:122745665(-) G-T intron -    22484847 chr5:122755119(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CEP120	chr5:122680675-122680676(-) m6A 3'UTR       27773535 chr5:122680807-122680808(-) m6A 3'UTR       27773535 chr5:122682153-122682154(-) m6A 3'UTR       24981863//27773535//22608085 chr5:122682186-122682187(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr5:122682253-122682254(-) Cm 3'UTR//CDS       - chr5:122682263-122682264(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//27371828//22608085 chr5:122682425-122682426(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085 chr5:122685640-122685641(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085 chr5:122685680-122685681(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085 chr5:122685720-122685721(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr5:122685729-122685730(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr5:122685747-122685748(-) m6A 3'UTR//CDS       24981863//27773535//22608085 chr5:122694015-122694016(-) m6A 3'UTR//intron       27773535 chr5:122694129-122694130(-) m6A 3'UTR//intron       24981863 chr5:122700192-122700193(-) m6A 3'UTR//CDS       24981863 chr5:122700198-122700199(-) m6A 3'UTR//CDS       24981863 chr5:122700207-122700208(-) m6A 3'UTR//CDS       24981863 chr5:122700246-122700247(-) m6A 3'UTR//CDS       24981863 chr5:122700282-122700283(-) m6A 3'UTR//CDS       24981863 chr5:122713085-122713086(-) m6A 3'UTR//CDS       24981863 chr5:122713102-122713103(-) Cm 3'UTR//CDS       - chr5:122713103-122713104(-) m6A 3'UTR//CDS       24981863 chr5:122713124-122713125(-) m6A 3'UTR//CDS       24981863 chr5:122713143-122713144(-) m6A 3'UTR//CDS       24981863 chr5:122713167-122713168(-) m6A 3'UTR//CDS       24981863 chr5:122713175-122713176(-) m6A 3'UTR//CDS       24981863 chr5:122713185-122713186(-) m6A 3'UTR//CDS       24981863 chr5:122713208-122713209(-) m6A 3'UTR//CDS       24981863 chr5:122714082-122714083(-) m6A 3'UTR//CDS       24981863 chr5:122714092-122714093(-) m6A 3'UTR//CDS       24981863 chr5:122717835-122717836(-) m6A 3'UTR//CDS       24981863 chr5:122717879-122717880(-) m6A 3'UTR//CDS       24981863 chr5:122725752-122725753(-) m6A 3'UTR//CDS       24981863//27773535 chr5:122725804-122725805(-) m6A 3'UTR//CDS       24981863//27773535 chr5:122725815-122725816(-) m6A 3'UTR//CDS       24981863//27773535 chr5:122725908-122725909(-) m6A 3'UTR//intron       27773535 chr5:122725938-122725939(-) m6A 3'UTR//intron       27773535 chr5:122736794-122736795(-) m6A intron       24284625 chr5:122736814-122736815(-) m6A intron       24284625 chr5:122736883-122736884(-) m6A intron       24284625 chr5:122736940-122736941(-) m6A intron       24284625//22575960 chr5:122737098-122737099(-) m6A intron       24284625//22608085 chr5:122737104-122737105(-) m6A intron       24284625//22608085 chr5:122737123-122737124(-) m6A intron       24284625//22608085 chr5:122737266-122737267(-) m6A intron       24284625 chr5:122737272-122737273(-) m6A intron       24284625 chr5:122737290-122737291(-) m6A intron       24284625 chr5:122737314-122737315(-) m6A intron       24284625 chr5:122737507-122737508(-) m6A intron       24284625//27773535//22608085 chr5:122737516-122737517(-) m6A intron       24284625//27773535//22608085 chr5:122737563-122737564(-) m6A intron       24284625//27371828//22608085 chr5:122737580-122737581(-) m6A intron       24284625//24209618//27773535//27371828//22608085 chr5:122737627-122737628(-) m6A intron       24284625//24209618//22608085 chr5:122737676-122737677(-) m6A intron       24284625//22608085 chr5:122737690-122737691(-) m6A intron       24284625 chr5:122737717-122737718(-) m6A intron       24284625 chr5:122737748-122737749(-) m6A intron       24284625 chr5:122738021-122738022(-) m6A intron       24284625 chr5:122758707-122758708(-) m6A 5'UTR//intron       25456834//27773536 chr5:122758740-122758741(-) m6A 5'UTR//intron       25456834//27773536 chr5:122758799-122758800(-) m6A 5'UTR//intron       25456834//27773536 chr5:122758832-122758833(-) m6A 5'UTR//intron       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CEP120	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: ebv-miR-BART15
Interactor2: CEP120

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg