Detail Information

Basic Information:


  VIRBase ID:  

VHID00360704

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      ebv-miR-BART15:           METTL21A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol ebv-miR-BART15 METTL21A
miRBase
Accession/Entrez ID		 MIMAT0003713 151194
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category miRNA mRNA
Alias - FAM119A//HCA557b//HSPA-KMT

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR METTL21A
chr2:208479262(-) A-I      intronic
chr2:208479263(-) A-I      intronic
chr2:208487061(-) A-I      intronic
chr2:208487056(-) A-I      intronic
chr2:208479255(-) A-I      intronic
chr2:208479254(-) A-I      intronic
chr2:208487098(-) A-I      intronic
chr2:208480308(-) A-I      intronic
chr2:208480292(-) A-I      intronic
chr2:208480240(-) A-I      intronic
chr2:208487096(-) A-I      intronic
chr2:208480764(-) A-I      intronic
chr2:208487099(-) A-I      intronic
chr2:208480344(-) A-I      intronic
chr2:208480337(-) A-I      intronic
chr2:208488465(-) A-I      intronic
chr2:208488341(-) A-I      intronic
chr2:208480005(-) A-I      intronic
chr2:208480320(-) A-I      intronic
chr2:208488482(-) A-I      intronic
chr2:208476992(-) A-I      3'UTR
chr2:208476994(-) A-I      3'UTR
chr2:208476997(-) A-I      3'UTR
chr2:208477043(-) A-I      3'UTR
chr2:208480691(-) A-I      intronic
chr2:208487792(-) A-I      intronic
chr2:208478463(-) A-I      intronic
chr2:208487159(-) A-I      intronic
chr2:208478613(-) A-I      intronic
chr2:208480254(-) A-I      intronic
chr2:208483344(-) A-I      intronic
chr2:208478482(-) A-I      intronic
chr2:208479978(-) A-I      intronic
chr2:208476909(-) A-I      3'UTR
chr2:208476858(-) A-I      3'UTR
chr2:208476884(-) A-I      3'UTR
chr2:208476972(-) A-I      3'UTR
chr2:208476952(-) A-I      3'UTR
chr2:208476948(-) A-I      3'UTR
chr2:208476962(-) A-I      3'UTR
chr2:208476932(-) A-I      3'UTR
chr2:208477105(-) A-I      3'UTR
chr2:208477096(-) A-I      3'UTR
chr2:208477056(-) A-I      3'UTR
chr2:208477097(-) A-I      3'UTR
chr2:208480724(-) A-I      intronic
chr2:208478612(-) A-I      intronic
chr2:208480334(-) A-I      intronic
chr2:208486958(-) A-I      intronic
chr2:208488410(-) A-I      intronic
chr2:208452070(-) A-I      intronic
chr2:208459716(-) A-I      intronic
chr2:208480759(-) A-I      intronic
chr2:208487770(-) A-I      intronic
chr2:208480178(-) A-I      intronic
chr2:208480165(-) A-I      intronic
chr2:208480746(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED METTL21A
chr2:208476858(-) A-I exon 3'UTR    15342557
chr2:208476884(-) A-I exon 3'UTR    15342557
chr2:208476909(-) A-I exon 3'UTR    15342557
chr2:208476932(-) A-I exon 3'UTR    15342557
chr2:208476948(-) A-I exon 3'UTR    15342557
chr2:208476952(-) A-I exon 3'UTR    15342557
chr2:208476961(-) A-I exon 3'UTR    15342557
chr2:208476962(-) A-I exon 3'UTR    15342557
chr2:208476972(-) A-I exon 3'UTR    15342557
chr2:208477051(-) A-I exon 3'UTR    15342557   //15258596
chr2:208477105(-) A-I exon 3'UTR    15258596
chr2:208477180(-) A-I exon 3'UTR    15342557   //15258596
chr2:208480254(-) A-G intron -    22484847
chr2:208487743(-) A-G intron -    22484847
chr2:208479248(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase METTL21A
chr2:208446504-208446505(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr2:208446526-208446527(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr2:208446555-208446556(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085
chr2:208446565-208446566(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085
chr2:208446579-208446580(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085
chr2:208446587-208446588(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085
chr2:208446626-208446627(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085
chr2:208446649-208446650(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085
chr2:208446659-208446660(-) m6A 3'UTR//CDS       24284625//24981863//27773535//27371828//22608085
chr2:208446666-208446667(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085
chr2:208446694-208446695(-) m6A 3'UTR//intron       24284625//24981863//27773535//22608085
chr2:208446803-208446804(-) m6A 3'UTR//intron       24284625//24209618//27773535
chr2:208446811-208446812(-) m6A 3'UTR//intron       24284625//24209618//27773535
chr2:208446843-208446844(-) m6A 3'UTR//intron       24284625//24209618
chr2:208477484-208477485(-) m6A 3'UTR//exon//intron       27773535
chr2:208477580-208477581(-) m6A 3'UTR//exon//intron       27773535
chr2:208477621-208477622(-) m6A 3'UTR//exon//intron       27773535
chr2:208477715-208477716(-) m6A 3'UTR//exon//intron       27773535
chr2:208477776-208477777(-) m6A 3'UTR//CDS//intron       24981863//27773535//22608085
chr2:208477788-208477789(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr2:208477946-208477947(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr2:208477954-208477955(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22608085
chr2:208477975-208477976(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//27773535//22575960//22608085
chr2:208478048-208478049(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:208478074-208478075(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085
chr2:208478080-208478081(-) m6A 3'UTR//CDS//intron       24284625//24209618//24981863//26404942//27773535//22575960//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate METTL21A
Exosome Blood     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: ebv-miR-BART15
Interactor2: METTL21A

Evidence Support:


Prediction-Evidence miRanda//Rep//Targetscan
Support Database RepTar//VmiReg

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